RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 MED24O75448 989 aa19.59■□□□□ 0.73
XRCC3-218ENST00000557439 GGCXP38435 758 aa19.59■□□□□ 0.73
XRCC3-218ENST00000557439 CASP5P51878 434 aa19.59■□□□□ 0.73
XRCC3-218ENST00000557439 PSMC6P62333 389 aa19.59■□□□□ 0.73
XRCC3-218ENST00000557439 ORC2Q13416 577 aaPredicted RBP19.59■□□□□ 0.73
XRCC3-218ENST00000557439 HERC4Q5GLZ8 1057 aaPredicted RBP19.59■□□□□ 0.73
XRCC3-218ENST00000557439 CCNI2Q6ZMN8 369 aaPredicted RBP19.59■□□□□ 0.73
XRCC3-218ENST00000557439 ZNF713Q8N859 430 aaPredicted RBP19.59■□□□□ 0.73
XRCC3-218ENST00000557439 FAM170AA1A519 330 aa19.59■□□□□ 0.73
XRCC3-218ENST00000557439 PLA2G4BP0C869 781 aa19.59■□□□□ 0.73
XRCC3-218ENST00000557439 CCDC84Q86UT8 332 aaPredicted RBP19.59■□□□□ 0.73
XRCC3-218ENST00000557439 FAM71BQ8TC56 605 aa19.59■□□□□ 0.73
XRCC3-218ENST00000557439 TSGA10Q9BZW7 698 aa19.59■□□□□ 0.73
XRCC3-218ENST00000557439 ZC3H12CQ9C0D7 883 aaKnown RBP19.59■□□□□ 0.73
XRCC3-218ENST00000557439 PACSIN2Q9UNF0 486 aaPredicted RBP19.59■□□□□ 0.73
XRCC3-218ENST00000557439 PCDHA1Q9Y5I3 950 aa19.59■□□□□ 0.73
XRCC3-218ENST00000557439 HOXA10P31260 410 aaPredicted RBP19.58■□□□□ 0.73
XRCC3-218ENST00000557439 MRPL12P52815 198 aaKnown RBP19.58■□□□□ 0.73
XRCC3-218ENST00000557439 PTPROQ16827 1216 aa19.58■□□□□ 0.73
XRCC3-218ENST00000557439 ASTE1Q2TB18 679 aaPredicted RBP19.58■□□□□ 0.73
XRCC3-218ENST00000557439 FAM83BQ5T0W9 1011 aa19.58■□□□□ 0.73
XRCC3-218ENST00000557439 APOBEC3HQ6NTF7 200 aaKnown RBP19.58■□□□□ 0.73
XRCC3-218ENST00000557439 SPATA4Q8NEY3 305 aa19.58■□□□□ 0.73
XRCC3-218ENST00000557439 DBNDD1Q9H9R9 158 aa19.58■□□□□ 0.73
XRCC3-218ENST00000557439 RNASE9P60153 205 aaKnown RBP19.58■□□□□ 0.72
XRCC3-218ENST00000557439 FKBP3Q00688 224 aaKnown RBP19.58■□□□□ 0.72
XRCC3-218ENST00000557439 SCFD1Q8WVM8 642 aa19.58■□□□□ 0.72
XRCC3-218ENST00000557439 PACSIN1Q9BY11 444 aa19.58■□□□□ 0.72
XRCC3-218ENST00000557439 EEF2P13639 858 aaKnown RBP19.57■□□□□ 0.72
XRCC3-218ENST00000557439 IRX5P78411 483 aaPredicted RBP19.57■□□□□ 0.72
XRCC3-218ENST00000557439 USH1GQ495M9 461 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 GJD4Q96KN9 370 aaPredicted RBP19.57■□□□□ 0.72
XRCC3-218ENST00000557439 TLR10Q9BXR5 811 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 PCDHA2Q9Y5H9 948 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 UBR3Q6ZT12 1888 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 AGPSO00116 658 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 FGFR1OPO95684 399 aaKnown RBP19.57■□□□□ 0.72
XRCC3-218ENST00000557439 FTCDO95954 541 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 ACTN1P12814 892 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 CYP11B2P19099 503 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 ACTN2P35609 894 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 RAPGEF1Q13905 1077 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 ARSHQ5FYA8 562 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 KIAA0825Q8IV33 1275 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 SEPT12Q8IYM1 358 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 ATF5Q9Y2D1 282 aaPredicted RBP19.57■□□□□ 0.72
XRCC3-218ENST00000557439 THSD7AQ9UPZ6 1657 aa19.57■□□□□ 0.72
XRCC3-218ENST00000557439 DDTLA6NHG4 134 aaPredicted RBP19.56■□□□□ 0.72
XRCC3-218ENST00000557439 LCA5LO95447 670 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 KRT18P05783 430 aaKnown RBP19.56■□□□□ 0.72
XRCC3-218ENST00000557439 SND1Q7KZF4 910 aaKnown RBP eCLIP19.56■□□□□ 0.72
XRCC3-218ENST00000557439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.56■□□□□ 0.72
XRCC3-218ENST00000557439 ANO3Q9BYT9 981 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 COA1Q9GZY4 146 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 PSD3Q9NYI0 1048 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 TARSL2A2RTX5 802 aaKnown RBP19.56■□□□□ 0.72
XRCC3-218ENST00000557439 PRPF6O94906 941 aaKnown RBP19.56■□□□□ 0.72
XRCC3-218ENST00000557439 GDF11O95390 407 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 TUBBP07437 444 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 PSMD2Q13200 908 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 PABPC4Q13310 644 aaKnown RBP eCLIP19.56■□□□□ 0.723e-7■■■■■ 28.7
XRCC3-218ENST00000557439 PRR16Q569H4 304 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 KLHDC7AQ5VTJ3 777 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 FAM133AQ8N9E0 248 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 TBC1D5Q92609 795 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 CRAMP1Q96RY5 1269 aa19.56■□□□□ 0.72
XRCC3-218ENST00000557439 RBM12Q9NTZ6 932 aaKnown RBP19.56■□□□□ 0.72
XRCC3-218ENST00000557439 ZNF219Q9P2Y4 722 aaPredicted RBP19.56■□□□□ 0.72
XRCC3-218ENST00000557439 A0A0U1RQG5 324 aaPredicted RBP19.55■□□□□ 0.72
XRCC3-218ENST00000557439 ZSCAN5CA6NGD5 496 aaPredicted RBP19.55■□□□□ 0.72
XRCC3-218ENST00000557439 ADRA2BP18089 450 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 CDC37Q16543 378 aaPredicted RBP19.55■□□□□ 0.72
XRCC3-218ENST00000557439 SP8Q8IXZ3 490 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 RPGRIP1Q96KN7 1286 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 IKZF4Q9H2S9 585 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 EMILIN3Q9NT22 766 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.55■□□□□ 0.72
XRCC3-218ENST00000557439 CYP4A11Q02928 519 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 SEPT2Q15019 361 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 MAP9Q49MG5 647 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 CCDC181Q5TID7 509 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 SFMBT2Q5VUG0 894 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 MSL3Q8N5Y2 521 aaKnown RBP19.55■□□□□ 0.72
XRCC3-218ENST00000557439 GOLPH3Q9H4A6 298 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 ATP6V0A2Q9Y487 856 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 HYOU1Q9Y4L1 999 aa19.55■□□□□ 0.72
XRCC3-218ENST00000557439 SMCHD1A6NHR9 2005 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 A0A087X0T9 212 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 ANKRD65E5RJM6 399 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 G3V3G9 751 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 FAM228BP0C875 321 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 KLRC1P26715 233 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 RBM5P52756 815 aaKnown RBP eCLIP19.54■□□□□ 0.72
XRCC3-218ENST00000557439 GPATCH4Q5T3I0 446 aaKnown RBP19.54■□□□□ 0.72
XRCC3-218ENST00000557439 DCAF8Q5TAQ9 597 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 CYP2W1Q8TAV3 490 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 GOLGA5Q8TBA6 731 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 ALS2CR12Q96Q35 445 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 KCTD10Q9H3F6 313 aa19.54■□□□□ 0.72
XRCC3-218ENST00000557439 BMP2KQ9NSY1 1161 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms