RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 PTPRSQ13332 1948 aa12.98□□□□□ -0.33
HNRNPC-231ENST00000557336 E7EWF7 191 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 SORBS3O60504 671 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 LPXNO60711 386 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 MYCLP12524 364 aaPredicted RBP12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 ACTN1P12814 892 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 BMP1P13497 986 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 WDR5P61964 334 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 DEFB103AP81534 67 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 MRPS5P82675 430 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 TFF2Q03403 129 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 MFSD10Q14728 455 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 KIAA0753Q2KHM9 967 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 PPP1R15BQ5SWA1 713 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 CELF3Q5SZQ8 465 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 LRRC8DQ7L1W4 858 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 DHX37Q8IY37 1157 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 IGDCC4Q8TDY8 1250 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 C16orf70Q9BSU1 422 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 ALG1Q9BT22 464 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 MAP3K20Q9NYL2 800 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 NOD1Q9Y239 953 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 TELO2Q9Y4R8 837 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 SUPT16HQ9Y5B9 1047 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 BRWD1Q9NSI6 2320 aa12.97□□□□□ -0.33
HNRNPC-231ENST00000557336 TNFRSF10AO00220 468 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 IFIT3O14879 490 aaKnown RBP12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 SNPHO15079 494 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 SGSM2O43147 1006 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 PPFIA4O75335 1185 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 BAIAP3O94812 1187 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 GGPS1O95749 300 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 UBA1P22314 1058 aaKnown RBP12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 HOXC8P31273 242 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 MRPS9P82933 396 aaKnown RBP12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 SEMA3FQ13275 785 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 HOMER1Q86YM7 354 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 ADAMTS19Q8TE59 1207 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 MARVELD3Q96A59 401 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 OSBPL7Q9BZF2 842 aa12.96□□□□□ -0.33
HNRNPC-231ENST00000557336 MYH6P13533 1939 aa12.96□□□□□ -0.34
HNRNPC-231ENST00000557336 FRMPD4Q14CM0 1322 aa12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 PNMA6FA0A0J9YX94 578 aa12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 PTK7Q13308 1070 aa12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 GRB10Q13322 594 aa12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 ZNF618Q5T7W0 954 aa12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 MB21D2Q8IYB1 491 aaPredicted RBP12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 MICALL1Q8N3F8 863 aa12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 SAMD3Q8N6K7 520 aa12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 C7orf31Q8N865 590 aa12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 ARNTL2Q8WYA1 636 aa12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 MAP4K1Q92918 833 aa12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 NECAB3Q96P71 396 aaPredicted RBP12.95□□□□□ -0.34
HNRNPC-231ENST00000557336 GCOM1H8Y6P7 765 aaPredicted RBP12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 POLR2MP0CAP2 368 aa12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 TGFB3P10600 412 aa12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 KCNQ1P51787 676 aa12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 CNKSR3Q6P9H4 555 aa12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 SERINC5Q86VE9 423 aa12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 FCHSD1Q86WN1 690 aa12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 CCDC155Q8N6L0 562 aa12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 DDX27Q96GQ7 796 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 SPATA33Q96N06 139 aa12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 INPP4AQ96PE3 977 aaPredicted RBP12.94□□□□□ -0.34
HNRNPC-231ENST00000557336 SPATA31C2B4DYI2 1134 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 TLL1O43897 1013 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 GJB5O95377 273 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 ICAM3P32942 547 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 TRDNQ13061 729 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 WTAPQ15007 396 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 ARSIQ5FYB1 569 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 KCNV1Q6PIU1 500 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.341e-8■□□□□ 9.2
HNRNPC-231ENST00000557336 UHRF1Q96T88 793 aaPredicted RBP12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 KATNAL1Q9BW62 490 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 LY9Q9HBG7 655 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 MYH7BA7E2Y1 1941 aa12.93□□□□□ -0.34
HNRNPC-231ENST00000557336 ABHD14A-ACY1A0A1B0GW23 586 aa12.92□□□□□ -0.34
HNRNPC-231ENST00000557336 MEIS2O14770 477 aa12.92□□□□□ -0.34
HNRNPC-231ENST00000557336 PARNO95453 639 aaKnown RBP12.92□□□□□ -0.34
HNRNPC-231ENST00000557336 CCND2P30279 289 aa12.92□□□□□ -0.34
HNRNPC-231ENST00000557336 IRX6P78412 446 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-231ENST00000557336 ADAM17P78536 824 aa12.92□□□□□ -0.34
HNRNPC-231ENST00000557336 NCOA7Q8NI08 942 aa12.92□□□□□ -0.34
HNRNPC-231ENST00000557336 PIBF1Q8WXW3 757 aa12.92□□□□□ -0.34
HNRNPC-231ENST00000557336 MYL10Q9BUA6 226 aa12.92□□□□□ -0.34
HNRNPC-231ENST00000557336 RNPEPQ9H4A4 650 aa12.92□□□□□ -0.34
HNRNPC-231ENST00000557336 LINC01553A4QN01 128 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 KIF28PB7ZC32 967 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 H3BRB1 525 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 TREHO43280 583 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 LGR5O75473 907 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 LGALS2P05162 132 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 SMIM10L2AP0DMW4 78 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 SMIM10L2BP0DMW5 78 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 KCNJ6P48051 423 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 USP17L6PQ6QN14 398 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 DBF4BQ8NFT6 615 aa12.91□□□□□ -0.34
HNRNPC-231ENST00000557336 GDPD5Q8WTR4 605 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms