RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 PCDHA8Q9Y5H6 950 aa20.47■□□□□ 0.87
SMG1-203ENST00000532700 UNC80Q8N2C7 3258 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 ZBBXA8MT70 800 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 NBNO60934 754 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 CKBP12277 381 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 KCNA2P16389 499 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 HOXC8P31273 242 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 KRT32Q14532 448 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 METTL7BQ6UX53 244 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 CYP2W1Q8TAV3 490 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 RBM28Q9NW13 759 aaKnown RBP20.46■□□□□ 0.87
SMG1-203ENST00000532700 CHD7Q9P2D1 2997 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 NAP1L2Q9ULW6 460 aaPredicted RBP20.46■□□□□ 0.87
SMG1-203ENST00000532700 UBIAD1Q9Y5Z9 338 aa20.46■□□□□ 0.87
SMG1-203ENST00000532700 TMEM265A0A087WTH1 108 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 STAM2O75886 525 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 RPS6KB1P23443 525 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 RBL2Q08999 1139 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 GNPTABQ3T906 1256 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 ZNF618Q5T7W0 954 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 SYNE3Q6ZMZ3 975 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 LRRC8DQ7L1W4 858 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 SPRED2Q7Z698 418 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 RPUSD2Q8IZ73 545 aaKnown RBP20.45■□□□□ 0.86
SMG1-203ENST00000532700 USP38Q8NB14 1042 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 KATNAL1Q9BW62 490 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 SLC4A7Q9Y6M7 1214 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 NID2Q14112 1375 aa20.45■□□□□ 0.86
SMG1-203ENST00000532700 H3BRB1 525 aa20.44■□□□□ 0.86
SMG1-203ENST00000532700 SMIM10L2AP0DMW4 78 aa20.44■□□□□ 0.86
SMG1-203ENST00000532700 SMIM10L2BP0DMW5 78 aa20.44■□□□□ 0.86
SMG1-203ENST00000532700 NAPAP54920 295 aa20.44■□□□□ 0.86
SMG1-203ENST00000532700 BFSP2Q13515 415 aa20.44■□□□□ 0.86
SMG1-203ENST00000532700 UTP14CQ5TAP6 766 aaKnown RBP20.44■□□□□ 0.86
SMG1-203ENST00000532700 RETREG2Q8NC44 543 aa20.44■□□□□ 0.86
SMG1-203ENST00000532700 MAFAQ8NHW3 353 aaPredicted RBP20.44■□□□□ 0.86
SMG1-203ENST00000532700 AFAP1L1Q8TED9 768 aa20.44■□□□□ 0.86
SMG1-203ENST00000532700 AGXT2Q9BYV1 514 aa20.44■□□□□ 0.86
SMG1-203ENST00000532700 PRDM12Q9H4Q4 367 aa20.44■□□□□ 0.86
SMG1-203ENST00000532700 TUT1Q9H6E5 874 aaKnown RBP20.44■□□□□ 0.86
SMG1-203ENST00000532700 RIC8AQ9NPQ8 531 aa20.44■□□□□ 0.86
SMG1-203ENST00000532700 COL4A4P53420 1690 aaPredicted RBP20.43■□□□□ 0.86
SMG1-203ENST00000532700 TREHO43280 583 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 FOSL2P15408 326 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 SELPP16109 830 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 PTK7Q13308 1070 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 ADGRE1Q14246 886 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 NEDD9Q14511 834 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 PKN1Q16512 942 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 BLOC1S2Q6QNY1 142 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 CAGE1Q8TC20 777 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 GPRASP2Q96D09 838 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 LARP6Q9BRS8 491 aaKnown RBP20.43■□□□□ 0.86
SMG1-203ENST00000532700 RNPEPQ9H4A4 650 aa20.43■□□□□ 0.86
SMG1-203ENST00000532700 NCOA5Q9HCD5 579 aaKnown RBP20.43■□□□□ 0.86
SMG1-203ENST00000532700 PRUNE2Q8WUY3 3088 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 GSTTP1A0A1W2PQM5 241 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 NOP56O00567 594 aaKnown RBP20.42■□□□□ 0.86
SMG1-203ENST00000532700 ATP2A2P16615 1042 aaKnown RBP20.42■□□□□ 0.86
SMG1-203ENST00000532700 RFC2P35250 354 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 CLK2P49760 499 aaKnown RBP20.42■□□□□ 0.86
SMG1-203ENST00000532700 METAP2P50579 478 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMG1-203ENST00000532700 TOB2Q14106 344 aaPredicted RBP20.42■□□□□ 0.86
SMG1-203ENST00000532700 NTRK3Q16288 839 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 XRRA1Q6P2D8 792 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 SERINC5Q86VE9 423 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 PHKBQ93100 1093 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 SENP7Q9BQF6 1050 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 ANO3Q9BYT9 981 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 FTOQ9C0B1 505 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMG1-203ENST00000532700 SETD4Q9NVD3 440 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 BARHL2Q9NY43 387 aa20.42■□□□□ 0.86
SMG1-203ENST00000532700 MICAL3Q7RTP6 2002 aa20.41■□□□□ 0.86
SMG1-203ENST00000532700 SPDYE3A6NKU9 549 aa20.41■□□□□ 0.86
SMG1-203ENST00000532700 PFKMP08237 780 aa20.41■□□□□ 0.86
SMG1-203ENST00000532700 HMGB1P09429 215 aaKnown RBP20.41■□□□□ 0.86
SMG1-203ENST00000532700 ARP10275 920 aa20.41■□□□□ 0.86
SMG1-203ENST00000532700 ADCY7P51828 1080 aa20.41■□□□□ 0.86
SMG1-203ENST00000532700 DEFB103AP81534 67 aa20.41■□□□□ 0.86
SMG1-203ENST00000532700 ZBTB10Q96DT7 871 aa20.41■□□□□ 0.86
SMG1-203ENST00000532700 PCYT2Q99447 389 aa20.41■□□□□ 0.86
SMG1-203ENST00000532700 USP26Q9BXU7 913 aa20.41■□□□□ 0.86
SMG1-203ENST00000532700 JADE2Q9NQC1 790 aa20.41■□□□□ 0.86
SMG1-203ENST00000532700 C17orf102A2RUQ5 167 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 SMCO2A6NFE2 343 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 REV3LO60673 3130 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 DTNBO60941 627 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 CXCL10P02778 98 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 TCF7P36402 384 aaPredicted RBP20.4■□□□□ 0.86
SMG1-203ENST00000532700 RCAN1P53805 252 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 ADAM17P78536 824 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 MTMR1Q13613 665 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 RAB30Q15771 203 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 PFKFB3Q16875 520 aaPredicted RBP20.4■□□□□ 0.86
SMG1-203ENST00000532700 PPP1R18Q6NYC8 613 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 NLRX1Q86UT6 975 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 LMBR1Q8WVP7 490 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 UIMC1Q96RL1 719 aa20.4■□□□□ 0.86
SMG1-203ENST00000532700 MTIF3Q9H2K0 278 aaKnown RBP20.4■□□□□ 0.86
SMG1-203ENST00000532700 PRDM6Q9NQX0 595 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms