RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-211ENST00000528840 UPP2O95045 317 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 SMIM10L2AP0DMW4 78 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 SMIM10L2BP0DMW5 78 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 UBA1P22314 1058 aaKnown RBP13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 PLA2G5P39877 138 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 GRM4Q14833 912 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 PLEKHG4Q58EX7 1191 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 FBXO22Q8NEZ5 403 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 KHSRPQ92945 711 aaKnown RBP eCLIP13.17□□□□□ -0.36e-8■■□□□ 11.9
PTP4A2-211ENST00000528840 OSBPL7Q9BZF2 842 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 SENP2Q9HC62 589 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 CD320Q9NPF0 282 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 MUC3AQ02505 3323 aa13.17□□□□□ -0.3
PTP4A2-211ENST00000528840 MYH6P13533 1939 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 ERICH2A1L162 156 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 CYTH3O43739 400 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 LGALS2P05162 132 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 KCNA5P22460 613 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 TMEM31Q5JXX7 168 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 CYFIP1Q7L576 1253 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 SEPT8Q92599 483 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 USP26Q9BXU7 913 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 UBE2ZQ9H832 354 aaPredicted RBP13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 SETD4Q9NVD3 440 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 REV3LO60673 3130 aa13.16□□□□□ -0.3
PTP4A2-211ENST00000528840 SPATA31C2B4DYI2 1134 aa13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 CTSHP09668 335 aa13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 GNAT1P11488 350 aa13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 HTRA4P83105 476 aaPredicted RBP13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 PTH1RQ03431 593 aa13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 NEDD9Q14511 834 aa13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 WTAPQ15007 396 aa13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 EPC2Q52LR7 807 aa13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 UTP14CQ5TAP6 766 aaKnown RBP13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 TOP1MTQ969P6 601 aa13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 YME1L1Q96TA2 773 aa13.15□□□□□ -0.3
PTP4A2-211ENST00000528840 FAM86C2PA6NEL3 165 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 CYP21A2P08686 494 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 ICAM3P32942 547 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 SP4Q02446 784 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 TROAPQ12815 778 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 GPM6BQ13491 265 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 LEXMQ3ZCV2 418 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 RALYLQ86SE5 291 aaKnown RBP13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 YTHDC1Q96MU7 727 aaKnown RBP13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 GPR20Q99678 358 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 XIRP2A4UGR9 3374 aa13.14□□□□□ -0.31
PTP4A2-211ENST00000528840 E7EWF7 191 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 PI4K2BG5E9Z4 385 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 STAM2O75886 525 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 PDE4AP27815 886 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 ARHGAP4P98171 946 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 SEMA3FQ13275 785 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 PTPROQ16827 1216 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 METTL7BQ6UX53 244 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 EP400NLQ6ZTU2 488 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 TMEM192Q8IY95 271 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 GJD3Q8N144 294 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 RUFY2Q8WXA3 655 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 MRPL38Q96DV4 380 aaKnown RBP13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 SAMD11Q96NU1 681 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 TAF6LQ9Y6J9 622 aa13.13□□□□□ -0.31
PTP4A2-211ENST00000528840 LAMA4Q16363 1823 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 H3BNC9 293 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 FIBPO43427 364 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 GPR37L1O60883 481 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 IL9P15248 144 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 HOXC8P31273 242 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 SSTR3P32745 418 aaPredicted RBP13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 SART3Q15020 963 aaKnown RBP13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 TTC22Q5TAA0 569 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 PTCRAQ6ISU1 281 aaPredicted RBP13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 USP17L6PQ6QN14 398 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 TRIM50Q86XT4 487 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 FAM178BQ8IXR5 827 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 IGDCC4Q8TDY8 1250 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 CUL5Q93034 780 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 INPP4AQ96PE3 977 aaPredicted RBP13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 C11orf16Q9NQ32 467 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 HCN4Q9Y3Q4 1203 aa13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
PTP4A2-211ENST00000528840 BAZ2BQ9UIF8 2168 aaKnown RBP13.11□□□□□ -0.31
PTP4A2-211ENST00000528840 GRXCR2A6NFK2 248 aa13.11□□□□□ -0.31
PTP4A2-211ENST00000528840 H3BQ06 376 aaPredicted RBP13.11□□□□□ -0.31
PTP4A2-211ENST00000528840 CAND2O75155 1236 aa13.11□□□□□ -0.31
PTP4A2-211ENST00000528840 CHRNA1P02708 482 aa13.11□□□□□ -0.31
PTP4A2-211ENST00000528840 CHMLP26374 656 aa13.11□□□□□ -0.31
PTP4A2-211ENST00000528840 FAM26DQ5JW98 314 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms