RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 KYQ8NBH2 561 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 CXorf38Q8TB03 319 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 FEZF2Q8TBJ5 459 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 ZNF526Q8TF50 670 aaPredicted RBP4.84□□□□□ -1.63
VPS13B-209ENST00000521559 ARMC5Q96C12 935 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 C20orf173Q96LM9 149 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 C11orf84Q9BUA3 381 aaPredicted RBP4.84□□□□□ -1.63
VPS13B-209ENST00000521559 SMOC1Q9H4F8 434 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 SIRPGQ9P1W8 387 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 PCDHB4Q9Y5E5 795 aa4.84□□□□□ -1.63
VPS13B-209ENST00000521559 SHROOM2Q13796 1616 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 ARAP1Q96P48 1450 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 A0A0G2JLL6 359 aaPredicted RBP4.83□□□□□ -1.64
VPS13B-209ENST00000521559 PRRG2O14669 202 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 PDPK1O15530 556 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 TADA3O75528 432 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 CYP7B1O75881 506 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 PABPC1P11940 636 aaKnown RBP4.83□□□□□ -1.64
VPS13B-209ENST00000521559 LCP1P13796 627 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 GJA9P57773 515 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 KIZQ2M2Z5 673 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 ZDHHC14Q8IZN3 488 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS13B-209ENST00000521559 TOE1Q96GM8 510 aaKnown RBP4.83□□□□□ -1.64
VPS13B-209ENST00000521559 NOX5Q96PH1 765 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 PHF20Q9BVI0 1012 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 CCDC113Q9H0I3 377 aa4.83□□□□□ -1.64
VPS13B-209ENST00000521559 ERCC6L2Q5T890 1561 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 CLIP1P30622 1438 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 NCANO14594 1321 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 FOXD2O60548 495 aaPredicted RBP4.82□□□□□ -1.64
VPS13B-209ENST00000521559 APPP05067 770 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 GPR85P60893 370 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 SPIRE1Q08AE8 756 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 RASGRF1Q13972 1273 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 MTERF2Q49AM1 385 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 SOGA3Q5TF21 947 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 NT5DC1Q5TFE4 455 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 FAM124AQ86V42 546 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 SCUBE1Q8IWY4 988 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 IFNL3Q8IZI9 196 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 SYT8Q8NBV8 401 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 WRNIP1Q96S55 665 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 GORASP1Q9BQQ3 440 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 SPATA25Q9BR10 227 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 SPATA9Q9BWV2 254 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 SLC6A20Q9NP91 592 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 ARHGEF4Q9NR80 690 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 DTLQ9NZJ0 730 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 MYOTQ9UBF9 498 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 MSRB2Q9Y3D2 182 aa4.82□□□□□ -1.64
VPS13B-209ENST00000521559 ARHGAP35Q9NRY4 1499 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 UACAQ9BZF9 1416 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 A0A1B0GTL3 188 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 TCRBV5S2A0A599 114 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 NAT1P18440 290 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 RPL13P26373 211 aaKnown RBP4.81□□□□□ -1.64
VPS13B-209ENST00000521559 GTF2F1P35269 517 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS13B-209ENST00000521559 THBS2P35442 1172 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 DLX2Q07687 328 aaPredicted RBP4.81□□□□□ -1.64
VPS13B-209ENST00000521559 KIAA2012Q0VF49 1180 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 SMAD4Q13485 552 aaKnown RBP4.81□□□□□ -1.64
VPS13B-209ENST00000521559 ZFYVE27Q5T4F4 411 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 STYK1Q6J9G0 422 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 LBX2Q6XYB7 198 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 LRP10Q7Z4F1 713 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS13B-209ENST00000521559 CLIC6Q96NY7 704 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 CDC6Q99741 560 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 ALG1Q9BT22 464 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 SPATA6Q9NWH7 488 aaPredicted RBP4.81□□□□□ -1.64
VPS13B-209ENST00000521559 FBXL7Q9UJT9 491 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 RIMBP3CA6NJZ7 1639 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 RIMBP3BA6NNM3 1639 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 RIMBP3Q9UFD9 1639 aa4.81□□□□□ -1.64
VPS13B-209ENST00000521559 FHOD3Q2V2M9 1422 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 CEP162Q5TB80 1403 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 FAM47E-STBD1D6RA91 191 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 AQP7O14520 342 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 CELA3BP08861 270 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 GNAT1P11488 350 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 GRK2P25098 689 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 GRK3P35626 688 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 STAT5AP42229 794 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 ITGA1P56199 1179 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 SSRP1Q08945 709 aaKnown RBP4.8□□□□□ -1.64
VPS13B-209ENST00000521559 SF3A1Q15459 793 aaKnown RBP4.8□□□□□ -1.64
VPS13B-209ENST00000521559 ZC3H12BQ5HYM0 836 aaKnown RBP4.8□□□□□ -1.64
VPS13B-209ENST00000521559 FAM26FQ5R3K3 315 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 UBXN11Q5T124 520 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 ADGRG2Q8IZP9 1017 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 FAM26EQ8N5C1 309 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 OSBP2Q969R2 916 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 TMEM209Q96SK2 561 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 EFCAB5A4FU69 1503 aa4.8□□□□□ -1.64
VPS13B-209ENST00000521559 KIAA0556O60303 1618 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 NOBOXO60393 691 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 MSCO60682 206 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 LONRF2Q1L5Z9 754 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms