RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 NSUN6Q8TEA1 469 aaKnown RBP16.25■□□□□ 0.19
CLN8-204ENST00000519254 PDCD2LQ9BRP1 358 aa16.25■□□□□ 0.19
CLN8-204ENST00000519254 TTC12Q9H892 705 aaPredicted RBP16.25■□□□□ 0.19
CLN8-204ENST00000519254 ZFYVE28Q9HCC9 887 aa16.25■□□□□ 0.19
CLN8-204ENST00000519254 LRWD1Q9UFC0 647 aa16.25■□□□□ 0.19
CLN8-204ENST00000519254 DACH1Q9UI36 760 aa16.25■□□□□ 0.19
CLN8-204ENST00000519254 LCTP09848 1927 aa16.25■□□□□ 0.19
CLN8-204ENST00000519254 ADGRA2Q96PE1 1338 aa16.24■□□□□ 0.19
CLN8-204ENST00000519254 CD44P16070 742 aaKnown RBP16.24■□□□□ 0.19
CLN8-204ENST00000519254 TPM4P67936 248 aa16.24■□□□□ 0.19
CLN8-204ENST00000519254 CRHR2Q13324 411 aa16.24■□□□□ 0.19
CLN8-204ENST00000519254 Q4G0T1 1027 aa16.24■□□□□ 0.19
CLN8-204ENST00000519254 CEP55Q53EZ4 464 aa16.24■□□□□ 0.19
CLN8-204ENST00000519254 PCNX4Q63HM2 1172 aa16.24■□□□□ 0.19
CLN8-204ENST00000519254 LENG9Q96B70 501 aa16.24■□□□□ 0.19
CLN8-204ENST00000519254 ZNF830Q96NB3 372 aaPredicted RBP16.24■□□□□ 0.19
CLN8-204ENST00000519254 CUEDC2Q9H467 287 aa16.24■□□□□ 0.19
CLN8-204ENST00000519254 KCNMB3Q9NPA1 279 aa16.24■□□□□ 0.19
CLN8-204ENST00000519254 IGLV3-22A0A075B6J6 115 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 POTEMA6NI47 508 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 PPP1R3GB7ZBB8 358 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 RPN1P04843 607 aaKnown RBP16.23■□□□□ 0.19
CLN8-204ENST00000519254 ATP1A3P13637 1013 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 CCND2P30279 289 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 GRB10Q13322 594 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 CT47A1Q5JQC4 288 aaPredicted RBP16.23■□□□□ 0.19
CLN8-204ENST00000519254 ENOX1Q8TC92 643 aaKnown RBP16.23■□□□□ 0.19
CLN8-204ENST00000519254 MAF1Q9H063 256 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 FANCLQ9NW38 375 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 NRBP1Q9UHY1 535 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 IVNS1ABPQ9Y6Y0 642 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 GOLGA6L6A8MZA4 724 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 TLR2O60603 784 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 NR3C2P08235 984 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 BCRP11274 1271 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 ERCC5P28715 1186 aaPredicted RBP16.23■□□□□ 0.19
CLN8-204ENST00000519254 MRPS9P82933 396 aaKnown RBP16.23■□□□□ 0.19
CLN8-204ENST00000519254 DRC7Q8IY82 874 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 PNMA5Q96PV4 448 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 NUDT12Q9BQG2 462 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 MXRA8Q9BRK3 442 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 RAB34Q9BZG1 259 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 MAGEF1Q9HAY2 307 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 PKD2L1Q9P0L9 805 aa16.23■□□□□ 0.19
CLN8-204ENST00000519254 PLXNB2O15031 1838 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 ASTN1O14525 1302 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 SOWAHBA6NEL2 793 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 MSH4O15457 936 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 KLRC4O43908 158 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 MYL1P05976 194 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 ITGB5P18084 799 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 ALDH5A1P51649 535 aaPredicted RBP16.22■□□□□ 0.19
CLN8-204ENST00000519254 FANCCQ00597 558 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 TRMT44Q8IYL2 757 aaKnown RBP16.22■□□□□ 0.19
CLN8-204ENST00000519254 SMYD4Q8IYR2 804 aaPredicted RBP16.22■□□□□ 0.19
CLN8-204ENST00000519254 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 DNERQ8NFT8 737 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 ETNPPLQ8TBG4 499 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 CALML4Q96GE6 196 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 WDR11Q9BZH6 1224 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 IFNKQ9P0W0 207 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 ADD3Q9UEY8 706 aaKnown RBP16.22■□□□□ 0.19
CLN8-204ENST00000519254 PCDHA12Q9UN75 941 aa16.22■□□□□ 0.19
CLN8-204ENST00000519254 ARP10275 920 aa16.21■□□□□ 0.19
CLN8-204ENST00000519254 MSNP26038 577 aaKnown RBP16.21■□□□□ 0.19
CLN8-204ENST00000519254 SETQ01105 290 aaPredicted RBP16.21■□□□□ 0.19
CLN8-204ENST00000519254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.21■□□□□ 0.19
CLN8-204ENST00000519254 CCDC186Q7Z3E2 898 aa16.21■□□□□ 0.19
CLN8-204ENST00000519254 GPR142Q7Z601 462 aa16.21■□□□□ 0.19
CLN8-204ENST00000519254 SLFN12Q8IYM2 578 aa16.21■□□□□ 0.19
CLN8-204ENST00000519254 XPO4Q9C0E2 1151 aaKnown RBP16.21■□□□□ 0.19
CLN8-204ENST00000519254 KCNF1Q9H3M0 494 aa16.21■□□□□ 0.19
CLN8-204ENST00000519254 BLOC1S4Q9NUP1 217 aa16.21■□□□□ 0.19
CLN8-204ENST00000519254 MEIS1O00470 390 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 CA12O43570 354 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 TPM3P06753 285 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 PTGS1P23219 599 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 ADORA2AP29274 412 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 MAPK4P31152 587 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 CLCN1P35523 988 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 VEGFBP49765 207 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 MTMR1Q13613 665 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 CCDC144BQ3MJ40 725 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 C17orf99Q6UX52 265 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 RMND1Q9NWS8 449 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 NFE2L3Q9Y4A8 694 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 UBIAD1Q9Y5Z9 338 aa16.21■□□□□ 0.18
CLN8-204ENST00000519254 TBX3O15119 743 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 ALDH1A1P00352 501 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 ZNF18P17022 549 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 PDE4DQ08499 809 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 KCNB1Q14721 858 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 TMEM119Q4V9L6 283 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 ZNF658Q5TYW1 1059 aaPredicted RBP16.2■□□□□ 0.18
CLN8-204ENST00000519254 KRT79Q5XKE5 535 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 PLEKHH3Q7Z736 793 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 VSIG10LQ86VR7 867 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 SNX29Q8TEQ0 813 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 C7orf25Q9BPX7 421 aa16.2■□□□□ 0.18
CLN8-204ENST00000519254 ZNF577Q9BSK1 485 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms