RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 DSCC1Q9BVC3 393 aa18.29■□□□□ 0.52
LMNA-223ENST00000515459 CNNM2Q9H8M5 875 aa18.29■□□□□ 0.52
LMNA-223ENST00000515459 RALGAPA2Q2PPJ7 1873 aa18.29■□□□□ 0.52
LMNA-223ENST00000515459 H3BNC9 293 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 CAND2O75155 1236 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 LGALS2P05162 132 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 SMIM10L2AP0DMW4 78 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 SMIM10L2BP0DMW5 78 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 HOXC8P31273 242 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 TRAF1Q13077 416 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 GPM6BQ13491 265 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 BANK1Q8NDB2 785 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 RNPEPQ9H4A4 650 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 MAD2L2Q9UI95 211 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 COL4A6Q14031 1691 aa18.28■□□□□ 0.52
LMNA-223ENST00000515459 H3BQ06 376 aaPredicted RBP18.27■□□□□ 0.52
LMNA-223ENST00000515459 GCOM1H8Y6P7 765 aaPredicted RBP18.27■□□□□ 0.52
LMNA-223ENST00000515459 HIP1O00291 1037 aa18.27■□□□□ 0.52
LMNA-223ENST00000515459 TREHO43280 583 aa18.27■□□□□ 0.52
LMNA-223ENST00000515459 UPP2O95045 317 aa18.27■□□□□ 0.52
LMNA-223ENST00000515459 POLR2MP0CAP2 368 aa18.27■□□□□ 0.52
LMNA-223ENST00000515459 TMEM192Q8IY95 271 aa18.27■□□□□ 0.52
LMNA-223ENST00000515459 GPKOWQ92917 476 aaPredicted RBP eCLIP18.27■□□□□ 0.521e-9■■■■□ 23.2
LMNA-223ENST00000515459 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
LMNA-223ENST00000515459 USP26Q9BXU7 913 aa18.27■□□□□ 0.52
LMNA-223ENST00000515459 OSBPL3Q9H4L5 887 aa18.27■□□□□ 0.52
LMNA-223ENST00000515459 NOP56O00567 594 aaKnown RBP18.26■□□□□ 0.51
LMNA-223ENST00000515459 CTSHP09668 335 aa18.26■□□□□ 0.51
LMNA-223ENST00000515459 GNAT1P11488 350 aa18.26■□□□□ 0.51
LMNA-223ENST00000515459 GNPTABQ3T906 1256 aa18.26■□□□□ 0.51
LMNA-223ENST00000515459 B4GALNT3Q6L9W6 998 aa18.26■□□□□ 0.51
LMNA-223ENST00000515459 FCHSD1Q86WN1 690 aa18.26■□□□□ 0.51
LMNA-223ENST00000515459 HOMER1Q86YM7 354 aa18.26■□□□□ 0.51
LMNA-223ENST00000515459 PLEKHM2Q8IWE5 1019 aa18.26■□□□□ 0.51
LMNA-223ENST00000515459 PABPC5Q96DU9 382 aaKnown RBP18.26■□□□□ 0.51
LMNA-223ENST00000515459 FAM50BQ9Y247 325 aa18.26■□□□□ 0.51
LMNA-223ENST00000515459 DOCK5Q9H7D0 1870 aa18.26■□□□□ 0.51
LMNA-223ENST00000515459 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.25■□□□□ 0.51
LMNA-223ENST00000515459 PALM3A6NDB9 673 aaPredicted RBP18.25■□□□□ 0.51
LMNA-223ENST00000515459 SEC23AQ15436 765 aa18.25■□□□□ 0.51
LMNA-223ENST00000515459 CSPP1Q1MSJ5 1256 aa18.25■□□□□ 0.51
LMNA-223ENST00000515459 TCEAL5Q5H9L2 206 aa18.25■□□□□ 0.51
LMNA-223ENST00000515459 EP400NLQ6ZTU2 488 aa18.25■□□□□ 0.51
LMNA-223ENST00000515459 CHD1LQ86WJ1 897 aa18.25■□□□□ 0.51
LMNA-223ENST00000515459 SMC5Q8IY18 1101 aa18.25■□□□□ 0.51
LMNA-223ENST00000515459 APBB2Q92870 758 aa18.25■□□□□ 0.51
LMNA-223ENST00000515459 IFIH1Q9BYX4 1025 aaKnown RBP18.25■□□□□ 0.51
LMNA-223ENST00000515459 OSBPL7Q9BZF2 842 aa18.25■□□□□ 0.51
LMNA-223ENST00000515459 NSUN3Q9H649 340 aaKnown RBP18.25■□□□□ 0.51
LMNA-223ENST00000515459 BCAS3Q9H6U6 928 aa18.25■□□□□ 0.51
LMNA-223ENST00000515459 MUC6Q6W4X9 2439 aa18.24■□□□□ 0.51
LMNA-223ENST00000515459 STAM2O75886 525 aa18.24■□□□□ 0.51
LMNA-223ENST00000515459 NEDD9Q14511 834 aa18.24■□□□□ 0.51
LMNA-223ENST00000515459 COL19A1Q14993 1142 aa18.24■□□□□ 0.51
LMNA-223ENST00000515459 UIMC1Q96RL1 719 aa18.24■□□□□ 0.51
LMNA-223ENST00000515459 PIGSQ96S52 555 aa18.24■□□□□ 0.51
LMNA-223ENST00000515459 RIOX1Q9H6W3 641 aa18.24■□□□□ 0.51
LMNA-223ENST00000515459 SETD4Q9NVD3 440 aa18.24■□□□□ 0.51
LMNA-223ENST00000515459 PRKAG3Q9UGI9 489 aa18.24■□□□□ 0.51
LMNA-223ENST00000515459 DCXO43602 365 aa18.23■□□□□ 0.51
LMNA-223ENST00000515459 ICAM3P32942 547 aa18.23■□□□□ 0.51
LMNA-223ENST00000515459 METTL7BQ6UX53 244 aa18.23■□□□□ 0.51
LMNA-223ENST00000515459 CYFIP1Q7L576 1253 aa18.23■□□□□ 0.51
LMNA-223ENST00000515459 INPP4AQ96PE3 977 aaPredicted RBP18.23■□□□□ 0.51
LMNA-223ENST00000515459 RWDD1Q9H446 243 aaPredicted RBP18.23■□□□□ 0.51
LMNA-223ENST00000515459 ZNF215Q9UL58 517 aaPredicted RBP18.23■□□□□ 0.51
LMNA-223ENST00000515459 KAT6AQ92794 2004 aa18.23■□□□□ 0.51
LMNA-223ENST00000515459 BAZ2BQ9UIF8 2168 aaKnown RBP18.23■□□□□ 0.51
LMNA-223ENST00000515459 ATG2AQ2TAZ0 1938 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 POTEB3A0JP26 581 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 SPATA31C2B4DYI2 1134 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 NCK2O43639 380 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 MRPS9P82933 396 aaKnown RBP18.22■□□□□ 0.51
LMNA-223ENST00000515459 AAMPQ13685 434 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 GRM4Q14833 912 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 SLC35G1Q2M3R5 365 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 FAM26DQ5JW98 314 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 POTEBQ6S5H4 581 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 CYB5R4Q7L1T6 521 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 ALYREFQ86V81 257 aaKnown RBP18.22■□□□□ 0.51
LMNA-223ENST00000515459 FIBCD1Q8N539 461 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 IL17RAQ96F46 866 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 GPR20Q99678 358 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 CLDND1Q9NY35 253 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 FRMPD4Q14CM0 1322 aa18.22■□□□□ 0.51
LMNA-223ENST00000515459 PNMA6FA0A0J9YX94 578 aa18.21■□□□□ 0.51
LMNA-223ENST00000515459 FIBPO43427 364 aa18.21■□□□□ 0.51
LMNA-223ENST00000515459 RB1P06400 928 aa18.21■□□□□ 0.51
LMNA-223ENST00000515459 CTNNB1P35222 781 aa18.21■□□□□ 0.51
LMNA-223ENST00000515459 ADAM17P78536 824 aa18.21■□□□□ 0.51
LMNA-223ENST00000515459 ARHGAP4P98171 946 aa18.21■□□□□ 0.51
LMNA-223ENST00000515459 ZP2Q05996 745 aa18.21■□□□□ 0.51
LMNA-223ENST00000515459 TRDNQ13061 729 aa18.21■□□□□ 0.51
LMNA-223ENST00000515459 TRIM50Q86XT4 487 aa18.21■□□□□ 0.51
LMNA-223ENST00000515459 RTEL1Q9NZ71 1219 aa18.21■□□□□ 0.51
LMNA-223ENST00000515459 C19orf67A6NJJ6 358 aa18.2■□□□□ 0.5
LMNA-223ENST00000515459 C5orf67F2Z3F1 127 aa18.2■□□□□ 0.5
LMNA-223ENST00000515459 CYTH3O43739 400 aa18.2■□□□□ 0.5
LMNA-223ENST00000515459 NUCB1Q02818 461 aa18.2■□□□□ 0.5
LMNA-223ENST00000515459 UTP14CQ5TAP6 766 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms