RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 FAM217BQ9NTX9 383 aaPredicted RBP16.42■□□□□ 0.22
RAB28-205ENST00000508274 RBM28Q9NW13 759 aaKnown RBP16.42■□□□□ 0.22
RAB28-205ENST00000508274 SNX14Q9Y5W7 946 aa16.42■□□□□ 0.22
RAB28-205ENST00000508274 GOLGA8AA7E2F4 631 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 GOLGA8BA8MQT2 603 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 NOP56O00567 594 aaKnown RBP16.41■□□□□ 0.22
RAB28-205ENST00000508274 HSPA4P34932 840 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 RFC2P35250 354 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 SP4Q02446 784 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 RAB30Q15771 203 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 LRRC8DQ7L1W4 858 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 TRIM50Q86XT4 487 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 AFAP1L1Q8TED9 768 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 KCNB2Q92953 911 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 JAKMIP1Q96N16 626 aaKnown RBP16.41■□□□□ 0.22
RAB28-205ENST00000508274 GPR20Q99678 358 aa16.41■□□□□ 0.22
RAB28-205ENST00000508274 FTOQ9C0B1 505 aaKnown RBP eCLIP16.41■□□□□ 0.22
RAB28-205ENST00000508274 H3BRB1 525 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 ATP9AO75110 1047 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 CKBP12277 381 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 SELPP16109 830 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 ATP2A2P16615 1042 aaKnown RBP16.4■□□□□ 0.22
RAB28-205ENST00000508274 ITGB5P18084 799 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 NEDD9Q14511 834 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 TRIM71Q2Q1W2 868 aaKnown RBP16.4■□□□□ 0.22
RAB28-205ENST00000508274 CCDC155Q8N6L0 562 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 PGBD1Q96JS3 809 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 PRDM12Q9H4Q4 367 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 TUT1Q9H6E5 874 aaKnown RBP16.4■□□□□ 0.22
RAB28-205ENST00000508274 MSRAQ9UJ68 235 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 NAP1L2Q9ULW6 460 aaPredicted RBP16.4■□□□□ 0.22
RAB28-205ENST00000508274 PCDHA6Q9UN73 950 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 PCDHA8Q9Y5H6 950 aa16.4■□□□□ 0.22
RAB28-205ENST00000508274 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
RAB28-205ENST00000508274 RBL2Q08999 1139 aa16.39■□□□□ 0.21
RAB28-205ENST00000508274 APOBRQ0VD83 1088 aa16.39■□□□□ 0.21
RAB28-205ENST00000508274 PTK7Q13308 1070 aa16.39■□□□□ 0.21
RAB28-205ENST00000508274 XRRA1Q6P2D8 792 aa16.39■□□□□ 0.21
RAB28-205ENST00000508274 Q6ZUG5 572 aa16.39■□□□□ 0.21
RAB28-205ENST00000508274 NLRX1Q86UT6 975 aa16.39■□□□□ 0.21
RAB28-205ENST00000508274 V9GY48 417 aaPredicted RBP16.39■□□□□ 0.21
RAB28-205ENST00000508274 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 NBNO60934 754 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 SMIM10L2AP0DMW4 78 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 SMIM10L2BP0DMW5 78 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 ACTN1P12814 892 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 NAPAP54920 295 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 TCTN1Q2MV58 587 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 ZNF618Q5T7W0 954 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 UTP14CQ5TAP6 766 aaKnown RBP16.38■□□□□ 0.21
RAB28-205ENST00000508274 TRAF7Q6Q0C0 670 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.38■□□□□ 0.21
RAB28-205ENST00000508274 BRF1Q92994 677 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 SENP7Q9BQF6 1050 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 PKD2L1Q9P0L9 805 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 STXBP3O00186 592 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 TRANK1O15050 2925 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 KCNA2P16389 499 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
RAB28-205ENST00000508274 FGD1P98174 961 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 MBTPS1Q14703 1052 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 USP38Q8NB14 1042 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 KAT6AQ92794 2004 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 GPRASP2Q96D09 838 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 USP26Q9BXU7 913 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 SLC28A3Q9HAS3 691 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 UBIAD1Q9Y5Z9 338 aa16.38■□□□□ 0.21
RAB28-205ENST00000508274 C17orf102A2RUQ5 167 aa16.37■□□□□ 0.21
RAB28-205ENST00000508274 TREHO43280 583 aa16.37■□□□□ 0.21
RAB28-205ENST00000508274 HOXC8P31273 242 aa16.37■□□□□ 0.21
RAB28-205ENST00000508274 METAP2P50579 478 aaKnown RBP eCLIP16.37■□□□□ 0.21
RAB28-205ENST00000508274 PPP2R2DQ66LE6 453 aa16.37■□□□□ 0.21
RAB28-205ENST00000508274 SERINC5Q86VE9 423 aa16.37■□□□□ 0.21
RAB28-205ENST00000508274 RNPEPQ9H4A4 650 aa16.37■□□□□ 0.21
RAB28-205ENST00000508274 RIC8AQ9NPQ8 531 aa16.37■□□□□ 0.21
RAB28-205ENST00000508274 TMEM260Q9NX78 707 aa16.37■□□□□ 0.21
RAB28-205ENST00000508274 PCDHA11Q9Y5I1 949 aa16.37■□□□□ 0.21
RAB28-205ENST00000508274 CXCL10P02778 98 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 NEFLP07196 543 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 TCF7P36402 384 aaPredicted RBP16.36■□□□□ 0.21
RAB28-205ENST00000508274 ADCY7P51828 1080 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 RCAN1P53805 252 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 MTMR1Q13613 665 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 ADGRE1Q14246 886 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 PPP1R18Q6NYC8 613 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 TMCO2Q7Z6W1 182 aaPredicted RBP16.36■□□□□ 0.21
RAB28-205ENST00000508274 ATP6V0A1Q93050 837 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 SLC9A7Q96T83 725 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 BARHL2Q9NY43 387 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 MICAL3Q7RTP6 2002 aa16.36■□□□□ 0.21
RAB28-205ENST00000508274 SMCO2A6NFE2 343 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 DLL1O00548 723 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 ADAMTS3O15072 1205 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 ARHGEF15O94989 841 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 REC8O95072 547 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 CA3P07451 260 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 THPOP40225 353 aa16.35■□□□□ 0.21
RAB28-205ENST00000508274 WDR5P61964 334 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms