RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ADAM17P78536 824 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 MBTPS1Q14703 1052 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 GNPTABQ3T906 1256 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 CYFIP1Q7L576 1253 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 DEFB128Q7Z7B8 93 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 RPUSD2Q8IZ73 545 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 AFAP1L1Q8TED9 768 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 MYLIPQ8WY64 445 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 ZNF576Q9H609 170 aa16.09■□□□□ 0.17
PDLIM7-211ENST00000504318 GOLGA8AA7E2F4 631 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 GOLGA8BA8MQT2 603 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 EPB41L2O43491 1005 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 CKBP12277 381 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 RPS6KB1P23443 525 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 APOBRQ0VD83 1088 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 PTK7Q13308 1070 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 BFSP2Q13515 415 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 NEDD9Q14511 834 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 NTRK3Q16288 839 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 PKN1Q16512 942 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 PPP1R18Q6NYC8 613 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 Q6ZUG5 572 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 HEATR3Q7Z4Q2 680 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 CRYGNQ8WXF5 182 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 CUL5Q93034 780 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 GPRASP2Q96D09 838 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 JAKMIP1Q96N16 626 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 MLXIPQ9HAP2 919 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 RIC8AQ9NPQ8 531 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 BARHL2Q9NY43 387 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 PCDHA6Q9UN73 950 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 PCDHA8Q9Y5H6 950 aa16.08■□□□□ 0.16
PDLIM7-211ENST00000504318 H3BRB1 525 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 SELPP16109 830 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 CHMP4BP1P59074 171 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 SERINC5Q86VE9 423 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 TRIM50Q86XT4 487 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 TEX2Q8IWB9 1127 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 BRF1Q92994 677 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 USP26Q9BXU7 913 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 TUT1Q9H6E5 874 aaKnown RBP16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 V9GY48 417 aaPredicted RBP16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 MICAL3Q7RTP6 2002 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 REV3LO60673 3130 aa16.07■□□□□ 0.16
PDLIM7-211ENST00000504318 GSTTP1A0A1W2PQM5 241 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 hCG_1984214I3L0E3 225 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 ARHGEF15O94989 841 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 SMIM10L2AP0DMW4 78 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 SMIM10L2BP0DMW5 78 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 MYOGP15173 224 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 RABGGTBP53611 331 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 TOB2Q14106 344 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 ZNF618Q5T7W0 954 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 SYNE3Q6ZMZ3 975 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 LRRC8DQ7L1W4 858 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 ZNF713Q8N859 430 aaPredicted RBP16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 CYP2W1Q8TAV3 490 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 PGBD1Q96JS3 809 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 OSBPL7Q9BZF2 842 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 RNPEPQ9H4A4 650 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 JADE2Q9NQC1 790 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 TRANK1O15050 2925 aa16.06■□□□□ 0.16
PDLIM7-211ENST00000504318 RAB30Q15771 203 aa16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 PFKFB3Q16875 520 aaPredicted RBP16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 BLOC1S2Q6QNY1 142 aa16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 NLRX1Q86UT6 975 aa16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 RETREG2Q8NC44 543 aa16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 SLC17A8Q8NDX2 589 aa16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 PCYT2Q99447 389 aa16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 MTIF3Q9H2K0 278 aaKnown RBP16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 NKX2-4Q9H2Z4 354 aa16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 ZSWIM6Q9HCJ5 1215 aa16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 SLC4A7Q9Y6M7 1214 aa16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 KAT6AQ92794 2004 aa16.05■□□□□ 0.16
PDLIM7-211ENST00000504318 ESYT2A0FGR8 921 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 TREHO43280 583 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 EDIL3O43854 480 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 REC8O95072 547 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 ATP2A2P16615 1042 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 SREBF1P36956 1147 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 METAP2P50579 478 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 NAPAP54920 295 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 ADGRE1Q14246 886 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 CCDC155Q8N6L0 562 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 USP38Q8NB14 1042 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 TMEM260Q9NX78 707 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 NOD1Q9Y239 953 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 PCDHA11Q9Y5I1 949 aa16.04■□□□□ 0.16
PDLIM7-211ENST00000504318 SMCO2A6NFE2 343 aa16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 SPDYE3A6NKU9 549 aa16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 PRPF3O43395 683 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 BAIAP3O94812 1187 aa16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 WDR5P61964 334 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 ITGB3BPQ13352 177 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 MTMR1Q13613 665 aa16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 MAFAQ8NHW3 353 aaPredicted RBP16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 PHOSPHO2Q8TCD6 241 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms