RNA–Protein interactions for RNA: ENST00000498015.2

NEB-217, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-217ENST00000498015 ZNF654Q8IZM8 581 aa8.39□□□□□ -1.07
NEB-217ENST00000498015 CAGE1Q8TC20 777 aa8.39□□□□□ -1.07
NEB-217ENST00000498015 DHX38Q92620 1227 aaKnown RBP8.39□□□□□ -1.07
NEB-217ENST00000498015 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.07
NEB-217ENST00000498015 TNPO1Q92973 898 aaKnown RBP8.39□□□□□ -1.07
NEB-217ENST00000498015 RRP36Q96EU6 259 aaKnown RBP8.39□□□□□ -1.07
NEB-217ENST00000498015 CTAGE1Q96RT6 745 aa8.39□□□□□ -1.07
NEB-217ENST00000498015 MAP3K14Q99558 947 aa8.39□□□□□ -1.07
NEB-217ENST00000498015 KATNAL1Q9BW62 490 aa8.39□□□□□ -1.07
NEB-217ENST00000498015 AGXT2Q9BYV1 514 aa8.39□□□□□ -1.07
NEB-217ENST00000498015 MLXIPQ9HAP2 919 aa8.39□□□□□ -1.07
NEB-217ENST00000498015 PDRG1Q9NUG6 133 aa8.39□□□□□ -1.07
NEB-217ENST00000498015 GTF2IRD1Q9UHL9 959 aa8.39□□□□□ -1.07
NEB-217ENST00000498015 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
NEB-217ENST00000498015 GBF1Q92538 1859 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 PRRC2BQ5JSZ5 2229 aaKnown RBP8.38□□□□□ -1.07
NEB-217ENST00000498015 CCDC69A6NI79 296 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 HAS3O00219 553 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 SH2B2O14492 632 aaPredicted RBP8.38□□□□□ -1.07
NEB-217ENST00000498015 PPFIA4O75335 1185 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 PLEKHA8P1O95397 391 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 F2P00734 622 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 TGFB3P10600 412 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 HOXD8P13378 290 aaPredicted RBP8.38□□□□□ -1.07
NEB-217ENST00000498015 SELPP16109 830 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 RXRAP19793 462 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 EVCP57679 992 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 ZNF200P98182 395 aaPredicted RBP8.38□□□□□ -1.07
NEB-217ENST00000498015 COL9A3Q14050 684 aaPredicted RBP8.38□□□□□ -1.07
NEB-217ENST00000498015 NBR1Q14596 966 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 CCDC85BQ15834 202 aaPredicted RBP8.38□□□□□ -1.07
NEB-217ENST00000498015 KLHL40Q2TBA0 621 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 HSDL1Q3SXM5 330 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 ATL3Q6DD88 541 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 USP17L6PQ6QN14 398 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 LRRC8DQ7L1W4 858 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 DHX32Q7L7V1 743 aaKnown RBP8.38□□□□□ -1.07
NEB-217ENST00000498015 RAB11FIP4Q86YS3 637 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 TMTC2Q8N394 836 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 SRBD1Q8N5C6 995 aaKnown RBP8.38□□□□□ -1.07
NEB-217ENST00000498015 AFAP1L1Q8TED9 768 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 CUL5Q93034 780 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 TMEM87BQ96K49 555 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 NEK1Q96PY6 1258 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 SLC9A7Q96T83 725 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 LZTS2Q9BRK4 669 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 SPZ1Q9BXG8 430 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 LRRC2Q9BYS8 371 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 BCAS3Q9H6U6 928 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 PRDM6Q9NQX0 595 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 RTEL1Q9NZ71 1219 aa8.38□□□□□ -1.07
NEB-217ENST00000498015 SEC63Q9UGP8 760 aaKnown RBP8.38□□□□□ -1.07
NEB-217ENST00000498015 NOP56O00567 594 aaKnown RBP8.37□□□□□ -1.07
NEB-217ENST00000498015 TRAK2O60296 914 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 CD2BP2O95400 341 aaKnown RBP8.37□□□□□ -1.07
NEB-217ENST00000498015 MBD3O95983 291 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 CA3P07451 260 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 CALM1P0DP23 149 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 CALM2P0DP24 149 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 CALM3P0DP25 149 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 CKBP12277 381 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 RPS6KB1P23443 525 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 SMARCA1P28370 1054 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 KCNJ6P48051 423 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 GNAQP50148 359 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 MRPS9P82933 396 aaKnown RBP8.37□□□□□ -1.07
NEB-217ENST00000498015 RBL2Q08999 1139 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 PTK7Q13308 1070 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 GPNMBQ14956 572 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 GNPTABQ3T906 1256 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 HERC6Q8IVU3 1022 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 RASEFQ8IZ41 740 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
NEB-217ENST00000498015 SMARCC2Q8TAQ2 1214 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 PHOSPHO2Q8TCD6 241 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 WNT8BQ93098 351 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 ZNF274Q96GC6 653 aaPredicted RBP8.37□□□□□ -1.07
NEB-217ENST00000498015 INPP4AQ96PE3 977 aaPredicted RBP8.37□□□□□ -1.07
NEB-217ENST00000498015 C16orf70Q9BSU1 422 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 CERS4Q9HA82 394 aa8.37□□□□□ -1.07
NEB-217ENST00000498015 EYSQ5T1H1 3165 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 FRMPD4Q14CM0 1322 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 hCG_1642624A0A1W2PR95 340 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 C17orf102A2RUQ5 167 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 SPATA31C2B4DYI2 1134 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 KIF28PB7ZC32 967 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 H3BRB1 525 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 RBAK-RBAKDNI3L0D1 243 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 RFXAPO00287 272 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 MEIS2O14770 477 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 FIBPO43427 364 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 NBNO60934 754 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 STAM2O75886 525 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 BAIAP3O94812 1187 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 BAG4O95429 457 aaKnown RBP8.36□□□□□ -1.07
NEB-217ENST00000498015 PARNO95453 639 aaKnown RBP8.36□□□□□ -1.07
NEB-217ENST00000498015 LGALS2P05162 132 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 ICAM3P32942 547 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 LIFRP42702 1097 aa8.36□□□□□ -1.07
NEB-217ENST00000498015 RCAN1P53805 252 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms