RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 KLHDC7AQ5VTJ3 777 aa16.42■□□□□ 0.22
UBXN11-215ENST00000494942 GLIS3Q8NEA6 775 aa16.42■□□□□ 0.22
UBXN11-215ENST00000494942 FAM76AQ8TAV0 307 aa16.42■□□□□ 0.22
UBXN11-215ENST00000494942 TBC1D16Q8TBP0 767 aa16.42■□□□□ 0.22
UBXN11-215ENST00000494942 TLR10Q9BXR5 811 aa16.42■□□□□ 0.22
UBXN11-215ENST00000494942 DMGDHQ9UI17 866 aaKnown RBP16.42■□□□□ 0.22
UBXN11-215ENST00000494942 ZBTB5O15062 677 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 SLC1A4P43007 532 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 PICALMQ13492 652 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 SND1Q7KZF4 910 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBXN11-215ENST00000494942 MTMR8Q96EF0 704 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 PSTPIP2Q9H939 334 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 POLLQ9UGP5 575 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 SERPINB13Q9UIV8 391 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 SALL4Q9UJQ4 1053 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 ATP6V0A2Q9Y487 856 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBXN11-215ENST00000494942 MYH10P35580 1976 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 GOLGA6CA6NDK9 693 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 GOLGA8KD6RF30 607 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 OPA1O60313 960 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 PPP1R11O60927 126 aaPredicted RBP16.41■□□□□ 0.22
UBXN11-215ENST00000494942 PPFIA4O75335 1185 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 NOL4O94818 638 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 GOLGA6DP0CG33 693 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 NAP1L1P55209 391 aaKnown RBP16.41■□□□□ 0.22
UBXN11-215ENST00000494942 ATP2B2Q01814 1243 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 ALS2CLQ60I27 953 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 C8orf74Q6P047 294 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 TRIM59Q8IWR1 403 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 HDAC7Q8WUI4 952 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 RIN2Q8WYP3 895 aaPredicted RBP16.41■□□□□ 0.22
UBXN11-215ENST00000494942 RASSF4Q9H2L5 321 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 GOLGA6AQ9NYA3 693 aa16.41■□□□□ 0.22
UBXN11-215ENST00000494942 SHOX2O60902 331 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-215ENST00000494942 CXCR5P32302 372 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 EIF6P56537 245 aaKnown RBP16.4■□□□□ 0.22
UBXN11-215ENST00000494942 NNTQ13423 1086 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 SF3B2Q13435 895 aaKnown RBP16.4■□□□□ 0.22
UBXN11-215ENST00000494942 EZH2Q15910 746 aaKnown RBP16.4■□□□□ 0.22
UBXN11-215ENST00000494942 HAUS3Q68CZ6 603 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 CAVIN3Q969G5 261 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 NLRC4Q9NPP4 1024 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 PCDHA2Q9Y5H9 948 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 APBA3O96018 575 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 MATR3P43243 847 aaKnown RBP eCLIP16.4■□□□□ 0.22
UBXN11-215ENST00000494942 USP11P51784 963 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 PPFIA1Q13136 1202 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 NAB2Q15742 525 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 ANKRD13CQ8N6S4 541 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 SH3GL2Q99962 352 aa16.4■□□□□ 0.22
UBXN11-215ENST00000494942 LSM14BQ9BX40 385 aaKnown RBP16.4■□□□□ 0.22
UBXN11-215ENST00000494942 ATF5Q9Y2D1 282 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-215ENST00000494942 C6orf229H3BNL8 230 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 TLR2O60603 784 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 CLSTN1O94985 981 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 SSBP05455 408 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBXN11-215ENST00000494942 PLA2G4BP0C869 781 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 ERCC3P19447 782 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 HOXA10P31260 410 aaPredicted RBP16.39■□□□□ 0.21
UBXN11-215ENST00000494942 POLR2FP61218 127 aaKnown RBP16.39■□□□□ 0.21
UBXN11-215ENST00000494942 SLC18A3Q16572 532 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 EDRF1Q3B7T1 1238 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 GBP6Q6ZN66 633 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 ZC3H3Q8IXZ2 948 aaKnown RBP16.39■□□□□ 0.21
UBXN11-215ENST00000494942 TMEM51Q9NW97 253 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 AIPL1Q9NZN9 384 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 LCMT1Q9UIC8 334 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 KIAA1024Q9UPX6 916 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 PITPNM2Q9BZ72 1349 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 MYH7BA7E2Y1 1941 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 ATAD5Q96QE3 1844 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 GRID2IPA4D2P6 1211 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 NCK2O43639 380 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 BUB1O43683 1085 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 EPB41P11171 864 aaKnown RBP16.39■□□□□ 0.21
UBXN11-215ENST00000494942 GTF2IP78347 998 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 HERC4Q5GLZ8 1057 aaPredicted RBP16.39■□□□□ 0.21
UBXN11-215ENST00000494942 TMC4Q7Z404 712 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 IFT20Q8IY31 132 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 CRAMP1Q96RY5 1269 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 PSMB7Q99436 277 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 EMILIN3Q9NT22 766 aa16.39■□□□□ 0.21
UBXN11-215ENST00000494942 SERPINB2P05120 415 aa16.38■□□□□ 0.21
UBXN11-215ENST00000494942 EPS15P42566 896 aa16.38■□□□□ 0.21
UBXN11-215ENST00000494942 SLC7A5Q01650 507 aa16.38■□□□□ 0.21
UBXN11-215ENST00000494942 TTBK2Q6IQ55 1244 aa16.38■□□□□ 0.21
UBXN11-215ENST00000494942 GPBP1Q86WP2 473 aa16.38■□□□□ 0.21
UBXN11-215ENST00000494942 SLFN12Q8IYM2 578 aa16.38■□□□□ 0.21
UBXN11-215ENST00000494942 KCTD10Q9H3F6 313 aa16.38■□□□□ 0.21
UBXN11-215ENST00000494942 RBM12Q9NTZ6 932 aaKnown RBP16.38■□□□□ 0.21
UBXN11-215ENST00000494942 USP17L10C9JJH3 530 aa16.37■□□□□ 0.21
UBXN11-215ENST00000494942 E9PMD0 336 aa16.37■□□□□ 0.21
UBXN11-215ENST00000494942 C10orf76Q5T2E6 689 aa16.37■□□□□ 0.21
UBXN11-215ENST00000494942 FOXR1Q6PIV2 292 aa16.37■□□□□ 0.21
UBXN11-215ENST00000494942 SCFD1Q8WVM8 642 aa16.37■□□□□ 0.21
UBXN11-215ENST00000494942 RUFY1Q96T51 708 aa16.37■□□□□ 0.21
UBXN11-215ENST00000494942 COA1Q9GZY4 146 aa16.37■□□□□ 0.21
UBXN11-215ENST00000494942 KCNMB3Q9NPA1 279 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms