RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 MSRAQ9UJ68 235 aa17.7■□□□□ 0.42
SEMA4D-219ENST00000486935 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.7■□□□□ 0.42
SEMA4D-219ENST00000486935 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
SEMA4D-219ENST00000486935 DLL1O00548 723 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 CDKL5O76039 1030 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 GGPS1O95749 300 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 IQCF3P0C7M6 154 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 TGFB3P10600 412 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 PSEN2P49810 448 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 C7orf31Q8N865 590 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 NSUN7Q8NE18 718 aaKnown RBP17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 MAFAQ8NHW3 353 aaPredicted RBP17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 SMARCC2Q8TAQ2 1214 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 GPKOWQ92917 476 aaPredicted RBP eCLIP17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 CUL5Q93034 780 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 PHKBQ93100 1093 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 LLPHQ9BRT6 129 aaKnown RBP17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 MLXIPQ9HAP2 919 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 RTEL1Q9NZ71 1219 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 SMC3Q9UQE7 1217 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 CNTNAP5Q8WYK1 1306 aa17.69■□□□□ 0.42
SEMA4D-219ENST00000486935 A0A0C4DFX4 3053 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 PITPNM1O00562 1244 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 PPFIA4O75335 1185 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 PFKMP08237 780 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 ZNF286BP0CG31 522 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 MRPS9P82933 396 aaKnown RBP17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 MFSD10Q14728 455 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 NTRK3Q16288 839 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 HSDL1Q3SXM5 330 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 USP17L6PQ6QN14 398 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 SESTD1Q86VW0 696 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 INTS4Q96HW7 963 aaKnown RBP17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 KATNAL1Q9BW62 490 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 SLC26A6Q9BXS9 759 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 FTOQ9C0B1 505 aaKnown RBP eCLIP17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 HDAC6Q9UBN7 1215 aa17.68■□□□□ 0.42
SEMA4D-219ENST00000486935 hCG_1642624A0A1W2PR95 340 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 IFNAR1P17181 557 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 UBA1P22314 1058 aaKnown RBP17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 RFC2P35250 354 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 RABGGTBP53611 331 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 SSRP1Q08945 709 aaKnown RBP17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 RAB30Q15771 203 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 KIAA0753Q2KHM9 967 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 TRIM22Q8IYM9 498 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 CTAGE1Q96RT6 745 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 NKX2-4Q9H2Z4 354 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 BCAS3Q9H6U6 928 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 GTF2IRD1Q9UHL9 959 aa17.67■□□□□ 0.42
SEMA4D-219ENST00000486935 MEIS2O14770 477 aa17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 F2P00734 622 aa17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 ACTN1P12814 892 aa17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 GJB2P29033 226 aa17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 AKAP17AQ02040 695 aaKnown RBP17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 GNPTABQ3T906 1256 aa17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 CCDC155Q8N6L0 562 aa17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 PSTPIP2Q9H939 334 aa17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 ORC3Q9UBD5 711 aaPredicted RBP17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 YBX2Q9Y2T7 364 aaKnown RBP17.66■□□□□ 0.42
SEMA4D-219ENST00000486935 SPATA31C2B4DYI2 1134 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 HAS3O00219 553 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 PIK3CDO00329 1044 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 STAM2O75886 525 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 ATP2A2P16615 1042 aaKnown RBP17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 FOSBP53539 338 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 HMGN5P82970 282 aaKnown RBP17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 ZNF200P98182 395 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 FUT2Q10981 343 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 FAM184AQ8NB25 1140 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 CAGE1Q8TC20 777 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 DHX38Q92620 1227 aaKnown RBP17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 PRDM12Q9H4Q4 367 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 SLC28A3Q9HAS3 691 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 FRMPD4Q14CM0 1322 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 STK36Q9NRP7 1315 aa17.65■□□□□ 0.42
SEMA4D-219ENST00000486935 NOP56O00567 594 aaKnown RBP17.64■□□□□ 0.41
SEMA4D-219ENST00000486935 HOXD8P13378 290 aaPredicted RBP17.64■□□□□ 0.41
SEMA4D-219ENST00000486935 MYOGP15173 224 aa17.64■□□□□ 0.41
SEMA4D-219ENST00000486935 ICAM3P32942 547 aa17.64■□□□□ 0.41
SEMA4D-219ENST00000486935 CYFIP1Q7L576 1253 aa17.64■□□□□ 0.41
SEMA4D-219ENST00000486935 AFAP1L1Q8TED9 768 aa17.64■□□□□ 0.41
SEMA4D-219ENST00000486935 INPP4AQ96PE3 977 aaPredicted RBP17.64■□□□□ 0.41
SEMA4D-219ENST00000486935 C16orf70Q9BSU1 422 aa17.64■□□□□ 0.41
SEMA4D-219ENST00000486935 RNF26Q9BY78 433 aaPredicted RBP17.64■□□□□ 0.41
SEMA4D-219ENST00000486935 V9GY48 417 aaPredicted RBP17.64■□□□□ 0.41
SEMA4D-219ENST00000486935 EYSQ5T1H1 3165 aa17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 PRPF3O43395 683 aaKnown RBP17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 FIBPO43427 364 aa17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 CKBP12277 381 aa17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 FDPSP14324 419 aaKnown RBP17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 SELPP16109 830 aa17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 SEMA3FQ13275 785 aa17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 PTK7Q13308 1070 aa17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 NEDD9Q14511 834 aa17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 PCNX4Q63HM2 1172 aa17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 XRRA1Q6P2D8 792 aa17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 LRRC8DQ7L1W4 858 aa17.63■□□□□ 0.41
SEMA4D-219ENST00000486935 HEATR3Q7Z4Q2 680 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms