RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 NLRC5Q86WI3 1866 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 BDP1A6H8Y1 2624 aa15.92■□□□□ 0.14
SMARCD3-211ENST00000485592 ERICH2A1L162 156 aa15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 PALM3A6NDB9 673 aaPredicted RBP15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 PI4K2BG5E9Z4 385 aa15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 LGALS2P05162 132 aa15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 GNAT1P11488 350 aa15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 MKRN4PQ13434 485 aaPredicted RBP15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 SP7Q8TDD2 431 aaPredicted RBP15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 KHSRPQ92945 711 aaKnown RBP eCLIP15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 PIGSQ96S52 555 aa15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 USP26Q9BXU7 913 aa15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 RALGAPA2Q2PPJ7 1873 aa15.91■□□□□ 0.14
SMARCD3-211ENST00000485592 COL4A6Q14031 1691 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 FAM86C2PA6NEL3 165 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 TREHO43280 583 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 STAM2O75886 525 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 CTSHP09668 335 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 HOXC8P31273 242 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 SSTR3P32745 418 aaPredicted RBP15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 NEDD9Q14511 834 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 GRM4Q14833 912 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 PUS10Q3MIT2 529 aaKnown RBP15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 EPC2Q52LR7 807 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 PTCRAQ6ISU1 281 aaPredicted RBP15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 CYB5R4Q7L1T6 521 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 FAM178BQ8IXR5 827 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 GJD3Q8N144 294 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 APBB2Q92870 758 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 GPKOWQ92917 476 aaPredicted RBP eCLIP15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 ZFP91Q96JP5 570 aaPredicted RBP15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 RNPEPQ9H4A4 650 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 RIOX1Q9H6W3 641 aa15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 ZNF215Q9UL58 517 aaPredicted RBP15.9■□□□□ 0.14
SMARCD3-211ENST00000485592 DOCK5Q9H7D0 1870 aa15.89■□□□□ 0.13
SMARCD3-211ENST00000485592 PNMA6FA0A0J9YX94 578 aa15.89■□□□□ 0.13
SMARCD3-211ENST00000485592 UPP2O95045 317 aa15.89■□□□□ 0.13
SMARCD3-211ENST00000485592 METTL7BQ6UX53 244 aa15.89■□□□□ 0.13
SMARCD3-211ENST00000485592 TOP1MTQ969P6 601 aa15.89■□□□□ 0.13
SMARCD3-211ENST00000485592 CD320Q9NPF0 282 aa15.89■□□□□ 0.13
SMARCD3-211ENST00000485592 C11orf16Q9NQ32 467 aa15.89■□□□□ 0.13
SMARCD3-211ENST00000485592 H3BNC9 293 aa15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 IFIT3O14879 490 aaKnown RBP15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 FIBPO43427 364 aa15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 IL9P15248 144 aa15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 ICAM3P32942 547 aa15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 GPM6BQ13491 265 aa15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 CYFIP1Q7L576 1253 aa15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 RALYLQ86SE5 291 aaKnown RBP15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 BANK1Q8NDB2 785 aa15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 INPP4AQ96PE3 977 aaPredicted RBP15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 IFIH1Q9BYX4 1025 aaKnown RBP15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 FAM50BQ9Y247 325 aa15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 FRMPD4Q14CM0 1322 aa15.88■□□□□ 0.13
SMARCD3-211ENST00000485592 GRXCR2A6NFK2 248 aa15.87■□□□□ 0.13
SMARCD3-211ENST00000485592 RBAK-RBAKDNI3L0D1 243 aa15.87■□□□□ 0.13
SMARCD3-211ENST00000485592 IGHDP01880 384 aa15.87■□□□□ 0.13
SMARCD3-211ENST00000485592 ALADP13716 330 aa15.87■□□□□ 0.13
SMARCD3-211ENST00000485592 WTAPQ15007 396 aa15.87■□□□□ 0.13
SMARCD3-211ENST00000485592 EP400NLQ6ZTU2 488 aa15.87■□□□□ 0.13
SMARCD3-211ENST00000485592 TMEM192Q8IY95 271 aa15.87■□□□□ 0.13
SMARCD3-211ENST00000485592 GPR20Q99678 358 aa15.87■□□□□ 0.13
SMARCD3-211ENST00000485592 NSUN3Q9H649 340 aaKnown RBP15.87■□□□□ 0.13
SMARCD3-211ENST00000485592 SETD4Q9NVD3 440 aa15.87■□□□□ 0.13
SMARCD3-211ENST00000485592 BRWD1Q9NSI6 2320 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 KAT6AQ92794 2004 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 PRR33A8MZF0 331 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 SPATA31C2B4DYI2 1134 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 CYTH3O43739 400 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 MRPS9P82933 396 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 ARHGAP4P98171 946 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 SLC35G1Q2M3R5 365 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 CATIPQ7Z7H3 387 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 SMARCC2Q8TAQ2 1214 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 NEK9Q8TD19 979 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 CUL5Q93034 780 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 PABPC5Q96DU9 382 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 IL25Q9H293 177 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 BCAS3Q9H6U6 928 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 RTEL1Q9NZ71 1219 aa15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 BAZ2BQ9UIF8 2168 aaKnown RBP15.86■□□□□ 0.13
SMARCD3-211ENST00000485592 H3BQ06 376 aaPredicted RBP15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 SP4Q02446 784 aa15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 CSPP1Q1MSJ5 1256 aa15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 TCEAL5Q5H9L2 206 aa15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 UTP14CQ5TAP6 766 aaKnown RBP15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 TRIM50Q86XT4 487 aa15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 FIBCD1Q8N539 461 aa15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 NCOA7Q8NI08 942 aa15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 RUFY2Q8WXA3 655 aa15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 RWDD3Q9Y3V2 267 aa15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 SUPT16HQ9Y5B9 1047 aaKnown RBP15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 NRCAMQ92823 1304 aa15.85■□□□□ 0.13
SMARCD3-211ENST00000485592 CYP21A2P08686 494 aa15.84■□□□□ 0.13
SMARCD3-211ENST00000485592 CTNNB1P35222 781 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms