RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 SMIM10L2BP0DMW5 78 aa14.37□□□□□ -0.11
CCDC57-208ENST00000475635 GSPT1P15170 499 aaKnown RBP14.37□□□□□ -0.11
CCDC57-208ENST00000475635 HOXC8P31273 242 aa14.37□□□□□ -0.11
CCDC57-208ENST00000475635 MKRN4PQ13434 485 aaPredicted RBP14.37□□□□□ -0.11
CCDC57-208ENST00000475635 PLEKHG4Q58EX7 1191 aa14.37□□□□□ -0.11
CCDC57-208ENST00000475635 MYOCDQ8IZQ8 938 aa14.37□□□□□ -0.11
CCDC57-208ENST00000475635 EPHX3Q9H6B9 360 aa14.37□□□□□ -0.11
CCDC57-208ENST00000475635 TUT1Q9H6E5 874 aaKnown RBP14.37□□□□□ -0.11
CCDC57-208ENST00000475635 BCAS3Q9H6U6 928 aa14.37□□□□□ -0.11
CCDC57-208ENST00000475635 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
CCDC57-208ENST00000475635 TTC3P53804 2025 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 NOP56O00567 594 aaKnown RBP14.36□□□□□ -0.11
CCDC57-208ENST00000475635 TREHO43280 583 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 MRPS9P82933 396 aaKnown RBP14.36□□□□□ -0.11
CCDC57-208ENST00000475635 PTH1RQ03431 593 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 TROAPQ12815 778 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 WTAPQ15007 396 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 GNPTABQ3T906 1256 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 TTC22Q5TAA0 569 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 METTL7BQ6UX53 244 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 FBXO22Q8NEZ5 403 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 C17orf80Q9BSJ5 609 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 RNPEPQ9H4A4 650 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 UBE2ZQ9H832 354 aaPredicted RBP14.36□□□□□ -0.11
CCDC57-208ENST00000475635 FRMPD4Q14CM0 1322 aa14.36□□□□□ -0.11
CCDC57-208ENST00000475635 STAM2O75886 525 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 PDE4AP27815 886 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 ICAM3P32942 547 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 PLA2G5P39877 138 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 HTRA4P83105 476 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-208ENST00000475635 NEDD9Q14511 834 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 SART3Q15020 963 aaKnown RBP14.35□□□□□ -0.11
CCDC57-208ENST00000475635 CYFIP1Q7L576 1253 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 RALYLQ86SE5 291 aaKnown RBP14.35□□□□□ -0.11
CCDC57-208ENST00000475635 NCOA7Q8NI08 942 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-208ENST00000475635 RUFY2Q8WXA3 655 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 PIBF1Q8WXW3 757 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 SEPT8Q92599 483 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 FAM122AQ96E09 287 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 YTHDC1Q96MU7 727 aaKnown RBP14.35□□□□□ -0.11
CCDC57-208ENST00000475635 INPP4AQ96PE3 977 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-208ENST00000475635 GPR20Q99678 358 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 USP26Q9BXU7 913 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 RTEL1Q9NZ71 1219 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 TAF6LQ9Y6J9 622 aa14.35□□□□□ -0.11
CCDC57-208ENST00000475635 KIAA1671Q9BY89 1806 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 COL4A6Q14031 1691 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 C5orf42Q9H799 3197 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.34□□□□□ -0.11
CCDC57-208ENST00000475635 SPATA31C2B4DYI2 1134 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 E7EWF7 191 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 CAND2O75155 1236 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 CTSHP09668 335 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 SEMA3FQ13275 785 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 CATIPQ7Z7H3 387 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 TRIM50Q86XT4 487 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC57-208ENST00000475635 YME1L1Q96TA2 773 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 LRFN3Q9BTN0 628 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 OSBPL7Q9BZF2 842 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 SETD4Q9NVD3 440 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 MUC6Q6W4X9 2439 aa14.34□□□□□ -0.11
CCDC57-208ENST00000475635 EVPLQ92817 2033 aa14.33□□□□□ -0.12
CCDC57-208ENST00000475635 FIBPO43427 364 aa14.33□□□□□ -0.12
CCDC57-208ENST00000475635 GNAT1P11488 350 aa14.33□□□□□ -0.12
CCDC57-208ENST00000475635 KCNA5P22460 613 aa14.33□□□□□ -0.12
CCDC57-208ENST00000475635 CHMLP26374 656 aa14.33□□□□□ -0.12
CCDC57-208ENST00000475635 EPC2Q52LR7 807 aa14.33□□□□□ -0.12
CCDC57-208ENST00000475635 TMEM31Q5JXX7 168 aa14.33□□□□□ -0.12
CCDC57-208ENST00000475635 SMARCC2Q8TAQ2 1214 aa14.33□□□□□ -0.12
CCDC57-208ENST00000475635 TOP1MTQ969P6 601 aa14.33□□□□□ -0.12
CCDC57-208ENST00000475635 ZNF215Q9UL58 517 aaPredicted RBP14.33□□□□□ -0.12
CCDC57-208ENST00000475635 TELO2Q9Y4R8 837 aa14.33□□□□□ -0.12
CCDC57-208ENST00000475635 UPP2O95045 317 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 ANTXR2P58335 489 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 ARHGAP4P98171 946 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 SP4Q02446 784 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 LEXMQ3ZCV2 418 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 UTP14CQ5TAP6 766 aaKnown RBP14.32□□□□□ -0.12
CCDC57-208ENST00000475635 PCNX4Q63HM2 1172 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 USP17L6PQ6QN14 398 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 IGDCC4Q8TDY8 1250 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 LMBR1Q8WVP7 490 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 CUL5Q93034 780 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 MRPL38Q96DV4 380 aaKnown RBP14.32□□□□□ -0.12
CCDC57-208ENST00000475635 SAMD11Q96NU1 681 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 CD320Q9NPF0 282 aa14.32□□□□□ -0.12
CCDC57-208ENST00000475635 MYH9P35579 1960 aaKnown RBP14.32□□□□□ -0.12
CCDC57-208ENST00000475635 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.31□□□□□ -0.12
CCDC57-208ENST00000475635 ADAM17P78536 824 aa14.31□□□□□ -0.12
CCDC57-208ENST00000475635 PTPROQ16827 1216 aa14.31□□□□□ -0.12
CCDC57-208ENST00000475635 MB21D2Q8IYB1 491 aaPredicted RBP14.31□□□□□ -0.12
CCDC57-208ENST00000475635 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
CCDC57-208ENST00000475635 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.31□□□□□ -0.12
CCDC57-208ENST00000475635 APBB2Q92870 758 aa14.31□□□□□ -0.12
CCDC57-208ENST00000475635 RRP36Q96EU6 259 aaKnown RBP14.31□□□□□ -0.12
CCDC57-208ENST00000475635 SENP7Q9BQF6 1050 aa14.31□□□□□ -0.12
CCDC57-208ENST00000475635 MYL10Q9BUA6 226 aa14.31□□□□□ -0.12
CCDC57-208ENST00000475635 SPZ1Q9BXG8 430 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms