RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SSTR3P32745 418 aaPredicted RBP16.22■□□□□ 0.19
CCDC78-209ENST00000474647 SEC23AQ15436 765 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 VSIG10LQ86VR7 867 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 MTMR8Q96EF0 704 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 PIGSQ96S52 555 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 YME1L1Q96TA2 773 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 TUT1Q9H6E5 874 aaKnown RBP16.22■□□□□ 0.19
CCDC78-209ENST00000474647 CD320Q9NPF0 282 aa16.22■□□□□ 0.19
CCDC78-209ENST00000474647 TREHO43280 583 aa16.21■□□□□ 0.19
CCDC78-209ENST00000474647 IL9P15248 144 aa16.21■□□□□ 0.19
CCDC78-209ENST00000474647 NUCB1Q02818 461 aa16.21■□□□□ 0.19
CCDC78-209ENST00000474647 GNPTABQ3T906 1256 aa16.21■□□□□ 0.19
CCDC78-209ENST00000474647 LEXMQ3ZCV2 418 aa16.21■□□□□ 0.19
CCDC78-209ENST00000474647 PLEKHG4Q58EX7 1191 aa16.21■□□□□ 0.19
CCDC78-209ENST00000474647 EP400NLQ6ZTU2 488 aa16.21■□□□□ 0.19
CCDC78-209ENST00000474647 SEPT8Q92599 483 aa16.21■□□□□ 0.19
CCDC78-209ENST00000474647 IL25Q9H293 177 aa16.21■□□□□ 0.19
CCDC78-209ENST00000474647 C11orf16Q9NQ32 467 aa16.21■□□□□ 0.19
CCDC78-209ENST00000474647 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-209ENST00000474647 PALM3A6NDB9 673 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-209ENST00000474647 GPR37L1O60883 481 aa16.2■□□□□ 0.18
CCDC78-209ENST00000474647 CENPBP07199 599 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-209ENST00000474647 TGFB3P10600 412 aa16.2■□□□□ 0.18
CCDC78-209ENST00000474647 HTRA4P83105 476 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-209ENST00000474647 TRDNQ13061 729 aa16.2■□□□□ 0.18
CCDC78-209ENST00000474647 MKRN4PQ13434 485 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-209ENST00000474647 GRM4Q14833 912 aa16.2■□□□□ 0.18
CCDC78-209ENST00000474647 PTPROQ16827 1216 aa16.2■□□□□ 0.18
CCDC78-209ENST00000474647 EPC2Q52LR7 807 aa16.2■□□□□ 0.18
CCDC78-209ENST00000474647 PTCRAQ6ISU1 281 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-209ENST00000474647 SAMD3Q8N6K7 520 aa16.2■□□□□ 0.18
CCDC78-209ENST00000474647 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.2■□□□□ 0.18
CCDC78-209ENST00000474647 PIBF1Q8WXW3 757 aa16.2■□□□□ 0.18
CCDC78-209ENST00000474647 MRPL38Q96DV4 380 aaKnown RBP16.2■□□□□ 0.18
CCDC78-209ENST00000474647 BCAS3Q9H6U6 928 aa16.2■□□□□ 0.18
CCDC78-209ENST00000474647 PLXNA4Q9HCM2 1894 aa16.2■□□□□ 0.18
CCDC78-209ENST00000474647 MUC6Q6W4X9 2439 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 ERICH2A1L162 156 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 H3BQ06 376 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-209ENST00000474647 IGHDP01880 384 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 SP4Q02446 784 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 TRAF1Q13077 416 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 TIGD5Q53EQ6 642 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 CYFIP1Q7L576 1253 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 TRIM50Q86XT4 487 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 FAM178BQ8IXR5 827 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 GJD3Q8N144 294 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 SP7Q8TDD2 431 aaPredicted RBP16.19■□□□□ 0.18
CCDC78-209ENST00000474647 SAMD11Q96NU1 681 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 OSBPL7Q9BZF2 842 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 RNPEPQ9H4A4 650 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 TTC3P53804 2025 aa16.19■□□□□ 0.18
CCDC78-209ENST00000474647 EVPLQ92817 2033 aa16.18■□□□□ 0.18
CCDC78-209ENST00000474647 PI4K2BG5E9Z4 385 aa16.18■□□□□ 0.18
CCDC78-209ENST00000474647 IFIT3O14879 490 aaKnown RBP16.18■□□□□ 0.18
CCDC78-209ENST00000474647 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-209ENST00000474647 GPM6BQ13491 265 aa16.18■□□□□ 0.18
CCDC78-209ENST00000474647 AAMPQ13685 434 aa16.18■□□□□ 0.18
CCDC78-209ENST00000474647 SLC35G1Q2M3R5 365 aa16.18■□□□□ 0.18
CCDC78-209ENST00000474647 UTP14CQ5TAP6 766 aaKnown RBP16.18■□□□□ 0.18
CCDC78-209ENST00000474647 USP26Q9BXU7 913 aa16.18■□□□□ 0.18
CCDC78-209ENST00000474647 IFIH1Q9BYX4 1025 aaKnown RBP16.18■□□□□ 0.18
CCDC78-209ENST00000474647 RIOX1Q9H6W3 641 aa16.18■□□□□ 0.18
CCDC78-209ENST00000474647 SENP2Q9HC62 589 aa16.18■□□□□ 0.18
CCDC78-209ENST00000474647 SETD4Q9NVD3 440 aa16.18■□□□□ 0.18
CCDC78-209ENST00000474647 RTEL1Q9NZ71 1219 aa16.18■□□□□ 0.18
CCDC78-209ENST00000474647 ZNF215Q9UL58 517 aaPredicted RBP16.18■□□□□ 0.18
CCDC78-209ENST00000474647 PNMA6FA0A0J9YX94 578 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 H3BNC9 293 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 GNAT1P11488 350 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 HOXC8P31273 242 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 MRPS9P82933 396 aaKnown RBP16.17■□□□□ 0.18
CCDC78-209ENST00000474647 ARHGAP4P98171 946 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 NEDD9Q14511 834 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 WTAPQ15007 396 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 METTL7BQ6UX53 244 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 RALYLQ86SE5 291 aaKnown RBP16.17■□□□□ 0.18
CCDC78-209ENST00000474647 TMEM192Q8IY95 271 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 BANK1Q8NDB2 785 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 TOP1MTQ969P6 601 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 GPR20Q99678 358 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 WDR81Q562E7 1941 aa16.17■□□□□ 0.18
CCDC78-209ENST00000474647 MYH9P35579 1960 aaKnown RBP16.17■□□□□ 0.18
CCDC78-209ENST00000474647 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.16■□□□□ 0.18
CCDC78-209ENST00000474647 GRXCR2A6NFK2 248 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 FIBPO43427 364 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 CYTH3O43739 400 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 CAND2O75155 1236 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 STAM2O75886 525 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 CTNNB1P35222 781 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 SART3Q15020 963 aaKnown RBP16.16■□□□□ 0.18
CCDC78-209ENST00000474647 TCEAL5Q5H9L2 206 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 LMBR1Q8WVP7 490 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 APBB2Q92870 758 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 UIMC1Q96RL1 719 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 TELO2Q9Y4R8 837 aa16.16■□□□□ 0.18
CCDC78-209ENST00000474647 ARIH1Q9Y4X5 557 aaPredicted RBP16.16■□□□□ 0.18
CCDC78-209ENST00000474647 SUPT16HQ9Y5B9 1047 aaKnown RBP16.16■□□□□ 0.18
CCDC78-209ENST00000474647 FNDC1Q4ZHG4 1894 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms