RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 EPHX3Q9H6B9 360 aa17.72■□□□□ 0.43
CMSS1-202ENST00000463526 TUT1Q9H6E5 874 aaKnown RBP17.72■□□□□ 0.43
CMSS1-202ENST00000463526 BDP1A6H8Y1 2624 aa17.72■□□□□ 0.43
CMSS1-202ENST00000463526 TRANK1O15050 2925 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 PTPRSQ13332 1948 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 MRPS9P82933 396 aaKnown RBP17.71■□□□□ 0.43
CMSS1-202ENST00000463526 SP4Q02446 784 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 UTP14CQ5TAP6 766 aaKnown RBP17.71■□□□□ 0.43
CMSS1-202ENST00000463526 NCOA7Q8NI08 942 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 RUFY2Q8WXA3 655 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 C1QTNF1Q9BXJ1 281 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 OSBPL7Q9BZF2 842 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 RNPEPQ9H4A4 650 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 SETD4Q9NVD3 440 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 LMCD1Q9NZU5 365 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 INSL6Q9Y581 213 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 XIRP2A4UGR9 3374 aa17.71■□□□□ 0.43
CMSS1-202ENST00000463526 EMSYQ7Z589 1322 aa17.71■□□□□ 0.42
CMSS1-202ENST00000463526 E7EWF7 191 aa17.7■□□□□ 0.42
CMSS1-202ENST00000463526 UPP2O95045 317 aa17.7■□□□□ 0.42
CMSS1-202ENST00000463526 CHMLP26374 656 aa17.7■□□□□ 0.42
CMSS1-202ENST00000463526 TROAPQ12815 778 aa17.7■□□□□ 0.42
CMSS1-202ENST00000463526 SART3Q15020 963 aaKnown RBP17.7■□□□□ 0.42
CMSS1-202ENST00000463526 GNPTABQ3T906 1256 aa17.7■□□□□ 0.42
CMSS1-202ENST00000463526 CATIPQ7Z7H3 387 aa17.7■□□□□ 0.42
CMSS1-202ENST00000463526 FBXO22Q8NEZ5 403 aa17.7■□□□□ 0.42
CMSS1-202ENST00000463526 TELO2Q9Y4R8 837 aa17.7■□□□□ 0.42
CMSS1-202ENST00000463526 NEDD9Q14511 834 aa17.69■□□□□ 0.42
CMSS1-202ENST00000463526 PLEKHG4Q58EX7 1191 aa17.69■□□□□ 0.42
CMSS1-202ENST00000463526 USP17L6PQ6QN14 398 aa17.69■□□□□ 0.42
CMSS1-202ENST00000463526 TRIM50Q86XT4 487 aa17.69■□□□□ 0.42
CMSS1-202ENST00000463526 SMARCC2Q8TAQ2 1214 aa17.69■□□□□ 0.42
CMSS1-202ENST00000463526 SEPT8Q92599 483 aa17.69■□□□□ 0.42
CMSS1-202ENST00000463526 MYL10Q9BUA6 226 aa17.69■□□□□ 0.42
CMSS1-202ENST00000463526 SPATA31C2B4DYI2 1134 aa17.68■□□□□ 0.42
CMSS1-202ENST00000463526 ANTXR2P58335 489 aa17.68■□□□□ 0.42
CMSS1-202ENST00000463526 SEMA3FQ13275 785 aa17.68■□□□□ 0.42
CMSS1-202ENST00000463526 METTL7BQ6UX53 244 aa17.68■□□□□ 0.42
CMSS1-202ENST00000463526 CUL5Q93034 780 aa17.68■□□□□ 0.42
CMSS1-202ENST00000463526 YME1L1Q96TA2 773 aa17.68■□□□□ 0.42
CMSS1-202ENST00000463526 GPR20Q99678 358 aa17.68■□□□□ 0.42
CMSS1-202ENST00000463526 USP26Q9BXU7 913 aa17.68■□□□□ 0.42
CMSS1-202ENST00000463526 UBE2ZQ9H832 354 aaPredicted RBP17.68■□□□□ 0.42
CMSS1-202ENST00000463526 FIBPO43427 364 aa17.67■□□□□ 0.42
CMSS1-202ENST00000463526 KCNA5P22460 613 aa17.67■□□□□ 0.42
CMSS1-202ENST00000463526 ICAM3P32942 547 aa17.67■□□□□ 0.42
CMSS1-202ENST00000463526 ARHGAP4P98171 946 aa17.67■□□□□ 0.42
CMSS1-202ENST00000463526 IGDCC4Q8TDY8 1250 aa17.67■□□□□ 0.42
CMSS1-202ENST00000463526 KHSRPQ92945 711 aaKnown RBP eCLIP17.67■□□□□ 0.422e-6■■■■□ 21
CMSS1-202ENST00000463526 RRP36Q96EU6 259 aaKnown RBP17.67■□□□□ 0.42
CMSS1-202ENST00000463526 INPP4AQ96PE3 977 aaPredicted RBP17.67■□□□□ 0.42
CMSS1-202ENST00000463526 SUPT16HQ9Y5B9 1047 aaKnown RBP17.67■□□□□ 0.42
CMSS1-202ENST00000463526 COL4A4P53420 1690 aaPredicted RBP17.67■□□□□ 0.42
CMSS1-202ENST00000463526 STAM2O75886 525 aa17.66■□□□□ 0.42
CMSS1-202ENST00000463526 GNAT1P11488 350 aa17.66■□□□□ 0.42
CMSS1-202ENST00000463526 HOXC8P31273 242 aa17.66■□□□□ 0.42
CMSS1-202ENST00000463526 HTRA4P83105 476 aaPredicted RBP17.66■□□□□ 0.42
CMSS1-202ENST00000463526 MKRN4PQ13434 485 aaPredicted RBP17.66■□□□□ 0.42
CMSS1-202ENST00000463526 CTCFLQ8NI51 663 aaPredicted RBP17.66■□□□□ 0.42
CMSS1-202ENST00000463526 LRFN3Q9BTN0 628 aa17.66■□□□□ 0.42
CMSS1-202ENST00000463526 ZNF215Q9UL58 517 aaPredicted RBP17.66■□□□□ 0.42
CMSS1-202ENST00000463526 BRWD1Q9NSI6 2320 aa17.66■□□□□ 0.42
CMSS1-202ENST00000463526 SGSM2O43147 1006 aa17.65■□□□□ 0.42
CMSS1-202ENST00000463526 EPC2Q52LR7 807 aa17.65■□□□□ 0.42
CMSS1-202ENST00000463526 NFXL1Q6ZNB6 911 aa17.65■□□□□ 0.42
CMSS1-202ENST00000463526 EP400NLQ6ZTU2 488 aa17.65■□□□□ 0.42
CMSS1-202ENST00000463526 MB21D2Q8IYB1 491 aaPredicted RBP17.65■□□□□ 0.42
CMSS1-202ENST00000463526 ZNF654Q8IZM8 581 aa17.65■□□□□ 0.42
CMSS1-202ENST00000463526 CMTR1Q8N1G2 835 aaKnown RBP17.65■□□□□ 0.42
CMSS1-202ENST00000463526 TOP1MTQ969P6 601 aa17.65■□□□□ 0.42
CMSS1-202ENST00000463526 FAM122AQ96E09 287 aa17.65■□□□□ 0.42
CMSS1-202ENST00000463526 CD320Q9NPF0 282 aa17.65■□□□□ 0.42
CMSS1-202ENST00000463526 SEC63Q9UGP8 760 aaKnown RBP17.65■□□□□ 0.42
CMSS1-202ENST00000463526 FRMPD4Q14CM0 1322 aa17.65■□□□□ 0.42
CMSS1-202ENST00000463526 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.64■□□□□ 0.41
CMSS1-202ENST00000463526 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.64■□□□□ 0.41
CMSS1-202ENST00000463526 FAM86C2PA6NEL3 165 aa17.64■□□□□ 0.41
CMSS1-202ENST00000463526 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
CMSS1-202ENST00000463526 GPM6BQ13491 265 aa17.64■□□□□ 0.41
CMSS1-202ENST00000463526 TMEM31Q5JXX7 168 aa17.64■□□□□ 0.41
CMSS1-202ENST00000463526 PCNX4Q63HM2 1172 aa17.64■□□□□ 0.41
CMSS1-202ENST00000463526 CASC1Q6TDU7 716 aa17.64■□□□□ 0.41
CMSS1-202ENST00000463526 NLRX1Q86UT6 975 aa17.64■□□□□ 0.41
CMSS1-202ENST00000463526 RAB11FIP4Q86YS3 637 aa17.64■□□□□ 0.41
CMSS1-202ENST00000463526 SP7Q8TDD2 431 aaPredicted RBP17.64■□□□□ 0.41
CMSS1-202ENST00000463526 LMBR1Q8WVP7 490 aa17.64■□□□□ 0.41
CMSS1-202ENST00000463526 IFIH1Q9BYX4 1025 aaKnown RBP17.64■□□□□ 0.41
CMSS1-202ENST00000463526 LY9Q9HBG7 655 aa17.64■□□□□ 0.41
CMSS1-202ENST00000463526 PKD2L1Q9P0L9 805 aa17.64■□□□□ 0.41
CMSS1-202ENST00000463526 RBM8AQ9Y5S9 174 aaKnown RBP17.64■□□□□ 0.41
CMSS1-202ENST00000463526 MEIS2O14770 477 aa17.63■□□□□ 0.41
CMSS1-202ENST00000463526 CAND2O75155 1236 aa17.63■□□□□ 0.41
CMSS1-202ENST00000463526 PLEKHA8P1O95397 391 aa17.63■□□□□ 0.41
CMSS1-202ENST00000463526 RXRAP19793 462 aa17.63■□□□□ 0.41
CMSS1-202ENST00000463526 KIF5BP33176 963 aa17.63■□□□□ 0.41
CMSS1-202ENST00000463526 PLA2G5P39877 138 aa17.63■□□□□ 0.41
CMSS1-202ENST00000463526 PTPROQ16827 1216 aa17.63■□□□□ 0.41
CMSS1-202ENST00000463526 LEXMQ3ZCV2 418 aa17.63■□□□□ 0.41
CMSS1-202ENST00000463526 RUFY4Q6ZNE9 571 aa17.63■□□□□ 0.41
CMSS1-202ENST00000463526 TMEM192Q8IY95 271 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms