RNA–Protein interactions for RNA: ENST00000455904.5

HDAC11-215, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-215ENST00000455904 NEK9Q8TD19 979 aa20.7■□□□□ 0.9
HDAC11-215ENST00000455904 GPKOWQ92917 476 aaPredicted RBP eCLIP20.7■□□□□ 0.9
HDAC11-215ENST00000455904 ATP6V0A1Q93050 837 aa20.7■□□□□ 0.9
HDAC11-215ENST00000455904 DSCC1Q9BVC3 393 aa20.7■□□□□ 0.9
HDAC11-215ENST00000455904 KRT23Q9C075 422 aa20.7■□□□□ 0.9
HDAC11-215ENST00000455904 PCDHA1Q9Y5I3 950 aa20.7■□□□□ 0.9
HDAC11-215ENST00000455904 GRXCR2A6NFK2 248 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 KLRF2D3W0D1 207 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 CAND2O75155 1236 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 LGALS2P05162 132 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 SMIM10L2AP0DMW4 78 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 SMIM10L2BP0DMW5 78 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 CCND2P30279 289 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 SSTR3P32745 418 aaPredicted RBP20.69■□□□□ 0.9
HDAC11-215ENST00000455904 PUS10Q3MIT2 529 aaKnown RBP20.69■□□□□ 0.9
HDAC11-215ENST00000455904 IFIT1BQ5T764 474 aaKnown RBP20.69■□□□□ 0.9
HDAC11-215ENST00000455904 SEPT8Q92599 483 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 YME1L1Q96TA2 773 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 CNNM2Q9H8M5 875 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 TTC3P53804 2025 aa20.69■□□□□ 0.9
HDAC11-215ENST00000455904 H3BRB1 525 aa20.68■□□□□ 0.9
HDAC11-215ENST00000455904 TREHO43280 583 aa20.68■□□□□ 0.9
HDAC11-215ENST00000455904 SEC23AQ15436 765 aa20.68■□□□□ 0.9
HDAC11-215ENST00000455904 OSBPL3Q9H4L5 887 aa20.68■□□□□ 0.9
HDAC11-215ENST00000455904 TUT1Q9H6E5 874 aaKnown RBP20.68■□□□□ 0.9
HDAC11-215ENST00000455904 MLXIPQ9HAP2 919 aa20.68■□□□□ 0.9
HDAC11-215ENST00000455904 MAD2L2Q9UI95 211 aa20.68■□□□□ 0.9
HDAC11-215ENST00000455904 TRIOO75962 3097 aa20.68■□□□□ 0.9
HDAC11-215ENST00000455904 H3BNC9 293 aa20.67■□□□□ 0.9
HDAC11-215ENST00000455904 H3BQ06 376 aaPredicted RBP20.67■□□□□ 0.9
HDAC11-215ENST00000455904 CTSHP09668 335 aa20.67■□□□□ 0.9
HDAC11-215ENST00000455904 COL19A1Q14993 1142 aa20.67■□□□□ 0.9
HDAC11-215ENST00000455904 PLEKHM2Q8IWE5 1019 aa20.67■□□□□ 0.9
HDAC11-215ENST00000455904 SMC5Q8IY18 1101 aa20.67■□□□□ 0.9
HDAC11-215ENST00000455904 BANK1Q8NDB2 785 aa20.67■□□□□ 0.9
HDAC11-215ENST00000455904 TOP1MTQ969P6 601 aa20.67■□□□□ 0.9
HDAC11-215ENST00000455904 ZFP91Q96JP5 570 aaPredicted RBP20.67■□□□□ 0.9
HDAC11-215ENST00000455904 OSBPL7Q9BZF2 842 aa20.67■□□□□ 0.9
HDAC11-215ENST00000455904 FRMPD4Q14CM0 1322 aa20.67■□□□□ 0.9
HDAC11-215ENST00000455904 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.66■□□□□ 0.9
HDAC11-215ENST00000455904 PALM3A6NDB9 673 aaPredicted RBP20.66■□□□□ 0.9
HDAC11-215ENST00000455904 GCOM1H8Y6P7 765 aaPredicted RBP20.66■□□□□ 0.9
HDAC11-215ENST00000455904 HIP1O00291 1037 aa20.66■□□□□ 0.9
HDAC11-215ENST00000455904 POLR2MP0CAP2 368 aa20.66■□□□□ 0.9
HDAC11-215ENST00000455904 ALADP13716 330 aa20.66■□□□□ 0.9
HDAC11-215ENST00000455904 GPM6BQ13491 265 aa20.66■□□□□ 0.9
HDAC11-215ENST00000455904 SLC35G1Q2M3R5 365 aa20.66■□□□□ 0.9
HDAC11-215ENST00000455904 TCEAL5Q5H9L2 206 aa20.66■□□□□ 0.9
HDAC11-215ENST00000455904 B4GALNT3Q6L9W6 998 aa20.66■□□□□ 0.9
HDAC11-215ENST00000455904 HOMER1Q86YM7 354 aa20.66■□□□□ 0.9
HDAC11-215ENST00000455904 PABPC5Q96DU9 382 aaKnown RBP20.66■□□□□ 0.9
HDAC11-215ENST00000455904 WDFY4Q6ZS81 3184 aa20.65■□□□□ 0.9
HDAC11-215ENST00000455904 NOP56O00567 594 aaKnown RBP20.65■□□□□ 0.9
HDAC11-215ENST00000455904 FCHSD1Q86WN1 690 aa20.65■□□□□ 0.9
HDAC11-215ENST00000455904 TMEM192Q8IY95 271 aa20.65■□□□□ 0.9
HDAC11-215ENST00000455904 IFIH1Q9BYX4 1025 aaKnown RBP20.65■□□□□ 0.9
HDAC11-215ENST00000455904 RNPEPQ9H4A4 650 aa20.65■□□□□ 0.9
HDAC11-215ENST00000455904 NSUN3Q9H649 340 aaKnown RBP20.65■□□□□ 0.9
HDAC11-215ENST00000455904 BCAS3Q9H6U6 928 aa20.65■□□□□ 0.9
HDAC11-215ENST00000455904 UPP2O95045 317 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 TRAF1Q13077 416 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 GRM4Q14833 912 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 GNPTABQ3T906 1256 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 METTL7BQ6UX53 244 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 CYB5R4Q7L1T6 521 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 CHD1LQ86WJ1 897 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 EXOC6Q8TAG9 804 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 APBB2Q92870 758 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 INPP4AQ96PE3 977 aaPredicted RBP20.64■□□□□ 0.89
HDAC11-215ENST00000455904 USP26Q9BXU7 913 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 RIOX1Q9H6W3 641 aa20.64■□□□□ 0.89
HDAC11-215ENST00000455904 ICAM3P32942 547 aa20.63■□□□□ 0.89
HDAC11-215ENST00000455904 MRPS9P82933 396 aaKnown RBP20.63■□□□□ 0.89
HDAC11-215ENST00000455904 ZP2Q05996 745 aa20.63■□□□□ 0.89
HDAC11-215ENST00000455904 SEMA3FQ13275 785 aa20.63■□□□□ 0.89
HDAC11-215ENST00000455904 TRIM50Q86XT4 487 aa20.63■□□□□ 0.89
HDAC11-215ENST00000455904 PIGSQ96S52 555 aa20.63■□□□□ 0.89
HDAC11-215ENST00000455904 GPR20Q99678 358 aa20.63■□□□□ 0.89
HDAC11-215ENST00000455904 SETD4Q9NVD3 440 aa20.63■□□□□ 0.89
HDAC11-215ENST00000455904 FAM50BQ9Y247 325 aa20.63■□□□□ 0.89
HDAC11-215ENST00000455904 TECTAO75443 2155 aa20.63■□□□□ 0.89
HDAC11-215ENST00000455904 DCXO43602 365 aa20.62■□□□□ 0.89
HDAC11-215ENST00000455904 STAM2O75886 525 aa20.62■□□□□ 0.89
HDAC11-215ENST00000455904 GNAT1P11488 350 aa20.62■□□□□ 0.89
HDAC11-215ENST00000455904 NEDD9Q14511 834 aa20.62■□□□□ 0.89
HDAC11-215ENST00000455904 FAM26DQ5JW98 314 aa20.62■□□□□ 0.89
HDAC11-215ENST00000455904 LMBR1Q8WVP7 490 aa20.62■□□□□ 0.89
HDAC11-215ENST00000455904 IL25Q9H293 177 aa20.62■□□□□ 0.89
HDAC11-215ENST00000455904 PRKAG3Q9UGI9 489 aa20.62■□□□□ 0.89
HDAC11-215ENST00000455904 ZNF215Q9UL58 517 aaPredicted RBP20.62■□□□□ 0.89
HDAC11-215ENST00000455904 SPATA31C2B4DYI2 1134 aa20.61■□□□□ 0.89
HDAC11-215ENST00000455904 CYTH3O43739 400 aa20.61■□□□□ 0.89
HDAC11-215ENST00000455904 CTNNB1P35222 781 aa20.61■□□□□ 0.89
HDAC11-215ENST00000455904 ADAM17P78536 824 aa20.61■□□□□ 0.89
HDAC11-215ENST00000455904 NUCB1Q02818 461 aa20.61■□□□□ 0.89
HDAC11-215ENST00000455904 CSPP1Q1MSJ5 1256 aa20.61■□□□□ 0.89
HDAC11-215ENST00000455904 EP400NLQ6ZTU2 488 aa20.61■□□□□ 0.89
HDAC11-215ENST00000455904 CYFIP1Q7L576 1253 aa20.61■□□□□ 0.89
HDAC11-215ENST00000455904 UIMC1Q96RL1 719 aa20.61■□□□□ 0.89
HDAC11-215ENST00000455904 PNMA6FA0A0J9YX94 578 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms