RNA–Protein interactions for RNA: ENST00000451405.1

RPUSD3-209, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-209ENST00000451405 KIF28PB7ZC32 967 aa18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 ICAM3P32942 547 aa18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 GNAQP50148 359 aa18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 EXOSC10Q01780 885 aaKnown RBP18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 FANCBQ8NB91 859 aa18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 SMARCC2Q8TAQ2 1214 aa18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 WNT8BQ93098 351 aa18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 INPP4AQ96PE3 977 aaPredicted RBP18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 C16orf70Q9BSU1 422 aa18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 FTOQ9C0B1 505 aaKnown RBP eCLIP18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 SLC12A7Q9Y666 1083 aa18.94■□□□□ 0.62
RPUSD3-209ENST00000451405 FAM86C2PA6NEL3 165 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 PIK3CDO00329 1044 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 GPR37L1O60883 481 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 CALM1P0DP23 149 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 CALM2P0DP24 149 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 CALM3P0DP25 149 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 TRIM71Q2Q1W2 868 aaKnown RBP18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 ADCK5Q3MIX3 580 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 KRT40Q6A162 431 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 SGMS1Q86VZ5 419 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 CAGE1Q8TC20 777 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 AFAP1L1Q8TED9 768 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 TCEANC2Q96MN5 208 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 NEK1Q96PY6 1258 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 KATNAL1Q9BW62 490 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 SEC63Q9UGP8 760 aaKnown RBP18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 TRANK1O15050 2925 aa18.93■□□□□ 0.62
RPUSD3-209ENST00000451405 TANC1Q9C0D5 1861 aa18.92■□□□□ 0.62
RPUSD3-209ENST00000451405 DOCK5Q9H7D0 1870 aa18.92■□□□□ 0.62
RPUSD3-209ENST00000451405 CKBP12277 381 aa18.92■□□□□ 0.62
RPUSD3-209ENST00000451405 SELPP16109 830 aa18.92■□□□□ 0.62
RPUSD3-209ENST00000451405 TCTN1Q2MV58 587 aa18.92■□□□□ 0.62
RPUSD3-209ENST00000451405 TMTC3Q6ZXV5 915 aa18.92■□□□□ 0.62
RPUSD3-209ENST00000451405 CYFIP1Q7L576 1253 aa18.92■□□□□ 0.62
RPUSD3-209ENST00000451405 ALYREFQ86V81 257 aaKnown RBP18.92■□□□□ 0.62
RPUSD3-209ENST00000451405 CUL5Q93034 780 aa18.92■□□□□ 0.62
RPUSD3-209ENST00000451405 BRPF3Q9ULD4 1205 aa18.92■□□□□ 0.62
RPUSD3-209ENST00000451405 NBNO60934 754 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 STAM2O75886 525 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 RBL2Q08999 1139 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 PTK7Q13308 1070 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 GNPTABQ3T906 1256 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 PCNX4Q63HM2 1172 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 TRAF7Q6Q0C0 670 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 LRRC8DQ7L1W4 858 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 CCDC155Q8N6L0 562 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 SLC9A7Q96T83 725 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 PSTPIP2Q9H939 334 aa18.91■□□□□ 0.62
RPUSD3-209ENST00000451405 EPOPA6NHQ4 379 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 H3BRB1 525 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 LGALS2P05162 132 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 UBE2SQ16763 222 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 TSGA10IPQ3SY00 556 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 ZNF618Q5T7W0 954 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 RNF20Q5VTR2 975 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 APOA5Q6Q788 366 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 MICU3Q86XE3 530 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 PHOSPHO2Q8TCD6 241 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 GPR20Q99678 358 aa18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 TUT1Q9H6E5 874 aaKnown RBP18.9■□□□□ 0.62
RPUSD3-209ENST00000451405 FIBPO43427 364 aa18.89■□□□□ 0.61
RPUSD3-209ENST00000451405 ATP9AO75110 1047 aa18.89■□□□□ 0.61
RPUSD3-209ENST00000451405 CDC45O75419 566 aa18.89■□□□□ 0.61
RPUSD3-209ENST00000451405 ARHGEF15O94989 841 aa18.89■□□□□ 0.61
RPUSD3-209ENST00000451405 CXCL10P02778 98 aa18.89■□□□□ 0.61
RPUSD3-209ENST00000451405 TAP1Q03518 808 aa18.89■□□□□ 0.61
RPUSD3-209ENST00000451405 NEDD9Q14511 834 aa18.89■□□□□ 0.61
RPUSD3-209ENST00000451405 MBTPS1Q14703 1052 aa18.89■□□□□ 0.61
RPUSD3-209ENST00000451405 METTL7BQ6UX53 244 aa18.89■□□□□ 0.61
RPUSD3-209ENST00000451405 DHX32Q7L7V1 743 aaKnown RBP18.89■□□□□ 0.61
RPUSD3-209ENST00000451405 FUT2Q10981 343 aa18.88■□□□□ 0.61
RPUSD3-209ENST00000451405 GRB10Q13322 594 aa18.88■□□□□ 0.61
RPUSD3-209ENST00000451405 XRRA1Q6P2D8 792 aa18.88■□□□□ 0.61
RPUSD3-209ENST00000451405 SYNE3Q6ZMZ3 975 aa18.88■□□□□ 0.61
RPUSD3-209ENST00000451405 TMCO2Q7Z6W1 182 aaPredicted RBP18.88■□□□□ 0.61
RPUSD3-209ENST00000451405 HERC6Q8IVU3 1022 aa18.88■□□□□ 0.61
RPUSD3-209ENST00000451405 UIMC1Q96RL1 719 aa18.88■□□□□ 0.61
RPUSD3-209ENST00000451405 RNPEPQ9H4A4 650 aa18.88■□□□□ 0.61
RPUSD3-209ENST00000451405 PTPRSQ13332 1948 aa18.88■□□□□ 0.61
RPUSD3-209ENST00000451405 PRRC2BQ5JSZ5 2229 aaKnown RBP18.88■□□□□ 0.61
RPUSD3-209ENST00000451405 PI4K2BG5E9Z4 385 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 NOP56O00567 594 aaKnown RBP18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 BAIAP3O94812 1187 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 SMIM10L2AP0DMW4 78 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 SMIM10L2BP0DMW5 78 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 CPA1P15085 419 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 ITGB5P18084 799 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 HOXC8P31273 242 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 SP4Q02446 784 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 TYW1BQ6NUM6 668 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 HEATR3Q7Z4Q2 680 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 SERINC5Q86VE9 423 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 TRIM50Q86XT4 487 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 KHSRPQ92945 711 aaKnown RBP eCLIP18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 SENP7Q9BQF6 1050 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 USP26Q9BXU7 913 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 FAM217BQ9NTX9 383 aaPredicted RBP18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 PCDHA6Q9UN73 950 aa18.87■□□□□ 0.61
RPUSD3-209ENST00000451405 PCDHA8Q9Y5H6 950 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms