RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 KRT10P13645 584 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 CTRB1P17538 263 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 ACADVLP49748 655 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 TTC39AQ5SRH9 613 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 IL23RQ5VWK5 629 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 FCRLBQ6BAA4 426 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 CTRB2Q6GPI1 263 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 RSRC2Q7L4I2 434 aaKnown RBP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 TEX19Q8NA77 164 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 NXPE3Q969Y0 559 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 INTS12Q96CB8 462 aaKnown RBP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 RBM18Q96H35 190 aaKnown RBP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 CATSPER2Q96P56 530 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 TRIM8Q9BZR9 551 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 MTRF1LQ9UGC7 380 aaKnown RBP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 SCAF8Q9UPN6 1271 aaKnown RBP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 PA2G4Q9UQ80 394 aaKnown RBP9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 PRKAB1Q9Y478 270 aa9.43□□□□□ -0.9
MCF2L2-203ENST00000447025 TONSLQ96HA7 1378 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CDHR2Q9BYE9 1310 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 GOLGA8IPA6NC78 632 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 GOLGA8CPA6NN73 597 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 LACTBL1A8MY62 500 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 NCK2O43639 380 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 KRT4P19013 534 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 IL32P24001 234 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CDC25BP30305 580 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CSTF2P33240 577 aaKnown RBP eCLIP9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CCNG1P51959 295 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 AP3M2P53677 418 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 PIP4K2BP78356 416 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CETN1Q12798 172 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 TRIM28Q13263 835 aaKnown RBP9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CNBD1Q8NA66 436 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 LINS1Q8NG48 757 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 BCL7CQ8WUZ0 217 aaPredicted RBP9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 IFT43Q96FT9 208 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 SETDB2Q96T68 719 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 BPIFA3Q9BQP9 254 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 FUCA2Q9BTY2 467 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 NAA15Q9BXJ9 866 aaKnown RBP9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 BRINP2Q9C0B6 783 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 DSEQ9UL01 958 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 L1RE1Q9UN81 338 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 A0A0J9YVX5 310 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 POTEB2H3BUK9 544 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 HNRNPRO43390 633 aaKnown RBP9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 IDH3BO43837 385 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CBFA2T3O75081 653 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 YEATS4O95619 227 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 SERPINB6P35237 376 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 TBL3Q12788 808 aaKnown RBP9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 PPFIA1Q13136 1202 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 SEMA3AQ14563 771 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 PSMD6Q15008 389 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 SKIDA1Q1XH10 827 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CAVIN4Q5BKX8 364 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 LRRC8AQ8IWT6 810 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 FAM186BQ8IYM0 893 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 TSR2Q969E8 191 aaKnown RBP9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 AZIN2Q96A70 460 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 L3MBTL3Q96JM7 780 aaPredicted RBP9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CIB1Q99828 191 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 SEPT11Q9NVA2 429 aaKnown RBP9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CHMP2BQ9UQN3 213 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 GIT1Q9Y2X7 761 aa9.42□□□□□ -0.9
MCF2L2-203ENST00000447025 CAMSAP2Q08AD1 1489 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 OR5K4A6NMS3 321 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 HDAC3O15379 428 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 MAP3K13O43283 966 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 ADAMTS4O75173 837 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 TSPAN9O75954 239 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 ZFYP08048 801 aaPredicted RBP9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 ZKSCAN1P17029 563 aaPredicted RBP9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 NAGAP17050 411 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 PTPN2P17706 415 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 LSP1P33241 339 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 EPS15P42566 896 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 CASP2P42575 452 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 MARSP56192 900 aaKnown RBP9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 GABREP78334 506 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 NFIAQ12857 509 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 NR1D2Q14995 579 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 FAM133BQ5BKY9 247 aaKnown RBP9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 CMPK2Q5EBM0 449 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 C6orf183Q5T699 404 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 SYDE2Q5VT97 1194 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 PLBD1Q6P4A8 553 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 DDX42Q86XP3 938 aaKnown RBP eCLIP9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 OSCP1Q8WVF1 389 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 CCDC127Q96BQ5 260 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 ITPKCQ96DU7 683 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 NSMCE3Q96MG7 304 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 MXD3Q9BW11 206 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 KLHL4Q9C0H6 718 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 VIPAS39Q9H9C1 493 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 PPCSQ9HAB8 311 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 PLCB1Q9NQ66 1216 aa9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 AGO2Q9UKV8 859 aaKnown RBP9.41□□□□□ -0.9
MCF2L2-203ENST00000447025 PCDHB6Q9Y5E3 794 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms