RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 MDM2Q00987 491 aaPredicted RBP19.9■□□□□ 0.78
CTSD-203ENST00000429746 CPLX2Q6PUV4 134 aaKnown RBP19.9■□□□□ 0.78
CTSD-203ENST00000429746 METTL7BQ6UX53 244 aa19.9■□□□□ 0.78
CTSD-203ENST00000429746 DHX37Q8IY37 1157 aaKnown RBP19.9■□□□□ 0.78
CTSD-203ENST00000429746 C16orf70Q9BSU1 422 aa19.9■□□□□ 0.78
CTSD-203ENST00000429746 KCNH7Q9NS40 1196 aa19.9■□□□□ 0.78
CTSD-203ENST00000429746 ORC3Q9UBD5 711 aaPredicted RBP19.9■□□□□ 0.78
CTSD-203ENST00000429746 KIAA0355O15063 1070 aa19.89■□□□□ 0.77
CTSD-203ENST00000429746 F2P00734 622 aa19.89■□□□□ 0.77
CTSD-203ENST00000429746 CIITAP33076 1130 aa19.89■□□□□ 0.77
CTSD-203ENST00000429746 ITGB3BPQ13352 177 aaPredicted RBP19.89■□□□□ 0.77
CTSD-203ENST00000429746 CEP55Q53EZ4 464 aa19.89■□□□□ 0.77
CTSD-203ENST00000429746 CYFIP1Q7L576 1253 aa19.89■□□□□ 0.77
CTSD-203ENST00000429746 SPATA33Q96N06 139 aa19.89■□□□□ 0.77
CTSD-203ENST00000429746 GPR20Q99678 358 aa19.89■□□□□ 0.77
CTSD-203ENST00000429746 TRIP12Q14669 1992 aaPredicted RBP19.88■□□□□ 0.77
CTSD-203ENST00000429746 KPNA6O60684 536 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 CLTBP09497 229 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 ZNF286BP0CG31 522 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 MTMR1Q13613 665 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 HIC1Q14526 733 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 NBPF20Q3BBV1 942 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 NIPA1Q7RTP0 329 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 NLRX1Q86UT6 975 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 CCDC83Q8IWF9 413 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 BLIDQ8IZY5 108 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 OXER1Q8TDS5 423 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 TNFRSF25Q93038 417 aa19.88■□□□□ 0.77
CTSD-203ENST00000429746 MROH7Q68CQ1 1323 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 WDR81Q562E7 1941 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 SOX1O00570 391 aaPredicted RBP19.87■□□□□ 0.77
CTSD-203ENST00000429746 DHX15O43143 795 aaKnown RBP19.87■□□□□ 0.77
CTSD-203ENST00000429746 B4GALT4O60513 344 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 PPFIA4O75335 1185 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 NLRP5P59047 1200 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 NEDD9Q14511 834 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 DGKDQ16760 1214 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 EARS2Q5JPH6 523 aaKnown RBP19.87■□□□□ 0.77
CTSD-203ENST00000429746 MCTP2Q6DN12 878 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 BICD2Q8TD16 824 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 SEZ6LQ9BYH1 1024 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 TRPV6Q9H1D0 765 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 EHMT1Q9H9B1 1298 aa19.87■□□□□ 0.77
CTSD-203ENST00000429746 AGO4Q9HCK5 861 aaKnown RBP19.87■□□□□ 0.77
CTSD-203ENST00000429746 GSTTP1A0A1W2PQM5 241 aa19.86■□□□□ 0.77
CTSD-203ENST00000429746 MAFGO15525 162 aa19.86■□□□□ 0.77
CTSD-203ENST00000429746 HOXC8P31273 242 aa19.86■□□□□ 0.77
CTSD-203ENST00000429746 SESTD1Q86VW0 696 aa19.86■□□□□ 0.77
CTSD-203ENST00000429746 LRCH3Q96II8 777 aa19.86■□□□□ 0.77
CTSD-203ENST00000429746 ALG1Q9BT22 464 aa19.86■□□□□ 0.77
CTSD-203ENST00000429746 NFASCO94856 1347 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 DCDC2CA8MYV0 355 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 LGALS2P05162 132 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 BRDTQ58F21 947 aaPredicted RBP19.85■□□□□ 0.77
CTSD-203ENST00000429746 GALNT17Q6IS24 598 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 NFRKBQ6P4R8 1299 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 VTI1AQ96AJ9 217 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 VWCEQ96DN2 955 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 CDHR1Q96JP9 859 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 ZSCAN31Q96LW9 406 aaPredicted RBP19.85■□□□□ 0.77
CTSD-203ENST00000429746 MBOAT7Q96N66 472 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 PCYT2Q99447 389 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 MLXIPQ9HAP2 919 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 TRMT13Q9NUP7 481 aaKnown RBP19.85■□□□□ 0.77
CTSD-203ENST00000429746 PKD2L1Q9P0L9 805 aa19.85■□□□□ 0.77
CTSD-203ENST00000429746 TANC1Q9C0D5 1861 aa19.84■□□□□ 0.77
CTSD-203ENST00000429746 UMODL1Q5DID0 1318 aa19.84■□□□□ 0.77
CTSD-203ENST00000429746 FAM205CA6NFA0 338 aa19.84■□□□□ 0.77
CTSD-203ENST00000429746 PSEN2P49810 448 aa19.84■□□□□ 0.77
CTSD-203ENST00000429746 TRIM50Q86XT4 487 aa19.84■□□□□ 0.77
CTSD-203ENST00000429746 TBCKQ8TEA7 893 aa19.84■□□□□ 0.77
CTSD-203ENST00000429746 LLPHQ9BRT6 129 aaKnown RBP19.84■□□□□ 0.77
CTSD-203ENST00000429746 PRDM5Q9NQX1 630 aaPredicted RBP19.84■□□□□ 0.77
CTSD-203ENST00000429746 SH2B1Q9NRF2 756 aaPredicted RBP19.84■□□□□ 0.77
CTSD-203ENST00000429746 CYP3A7-CYP3A51PA0A087WV96 503 aa19.83■□□□□ 0.77
CTSD-203ENST00000429746 CCNE2O96020 404 aa19.83■□□□□ 0.77
CTSD-203ENST00000429746 CYP3A7P24462 503 aa19.83■□□□□ 0.77
CTSD-203ENST00000429746 EPHB4P54760 987 aa19.83■□□□□ 0.77
CTSD-203ENST00000429746 NR5A1Q13285 461 aa19.83■□□□□ 0.77
CTSD-203ENST00000429746 MFSD10Q14728 455 aa19.83■□□□□ 0.77
CTSD-203ENST00000429746 GDF6Q6KF10 455 aaPredicted RBP19.83■□□□□ 0.77
CTSD-203ENST00000429746 UPF2Q9HAU5 1272 aaKnown RBP19.83■□□□□ 0.77
CTSD-203ENST00000429746 SCN5AQ14524 2016 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 RBAK-RBAKDNI3L0D1 243 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 ATG7O95352 703 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 TDP2O95551 362 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 USP11P51784 963 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 PTPN11Q06124 597 aaPredicted RBP19.82■□□□□ 0.76
CTSD-203ENST00000429746 KIAA0753Q2KHM9 967 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 FAM109BQ6ICB4 259 aaPredicted RBP19.82■□□□□ 0.76
CTSD-203ENST00000429746 PLA2G4DQ86XP0 818 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 GIMAP8Q8ND71 665 aaPredicted RBP19.82■□□□□ 0.76
CTSD-203ENST00000429746 DHX38Q92620 1227 aaKnown RBP19.82■□□□□ 0.76
CTSD-203ENST00000429746 BADQ92934 168 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 TMX3Q96JJ7 454 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 NOC4LQ9BVI4 516 aaKnown RBP19.82■□□□□ 0.76
CTSD-203ENST00000429746 TMEM39AQ9NV64 488 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 HDAC6Q9UBN7 1215 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 GTF2IRD1Q9UHL9 959 aa19.82■□□□□ 0.76
CTSD-203ENST00000429746 WNT7AO00755 349 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms