RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 HIP1O00291 1037 aa21.24■□□□□ 0.99
UPK3BP1-201ENST00000428678 UPP2O95045 317 aa21.24■□□□□ 0.99
UPK3BP1-201ENST00000428678 CTSHP09668 335 aa21.24■□□□□ 0.99
UPK3BP1-201ENST00000428678 SMIM10L2AP0DMW4 78 aa21.24■□□□□ 0.99
UPK3BP1-201ENST00000428678 SMIM10L2BP0DMW5 78 aa21.24■□□□□ 0.99
UPK3BP1-201ENST00000428678 FCHSD1Q86WN1 690 aa21.24■□□□□ 0.99
UPK3BP1-201ENST00000428678 PLEKHM2Q8IWE5 1019 aa21.24■□□□□ 0.99
UPK3BP1-201ENST00000428678 SAMD3Q8N6K7 520 aa21.24■□□□□ 0.99
UPK3BP1-201ENST00000428678 SAMD11Q96NU1 681 aa21.24■□□□□ 0.99
UPK3BP1-201ENST00000428678 MAD2L2Q9UI95 211 aa21.24■□□□□ 0.99
UPK3BP1-201ENST00000428678 H3BQ06 376 aaPredicted RBP21.23■□□□□ 0.99
UPK3BP1-201ENST00000428678 GCOM1H8Y6P7 765 aaPredicted RBP21.23■□□□□ 0.99
UPK3BP1-201ENST00000428678 NOP56O00567 594 aaKnown RBP21.23■□□□□ 0.99
UPK3BP1-201ENST00000428678 TREHO43280 583 aa21.23■□□□□ 0.99
UPK3BP1-201ENST00000428678 LGALS2P05162 132 aa21.23■□□□□ 0.99
UPK3BP1-201ENST00000428678 POLR2MP0CAP2 368 aa21.23■□□□□ 0.99
UPK3BP1-201ENST00000428678 TIGD5Q53EQ6 642 aa21.23■□□□□ 0.99
UPK3BP1-201ENST00000428678 EP400NLQ6ZTU2 488 aa21.23■□□□□ 0.99
UPK3BP1-201ENST00000428678 CHD1LQ86WJ1 897 aa21.23■□□□□ 0.99
UPK3BP1-201ENST00000428678 GPM6BQ13491 265 aa21.22■□□□□ 0.99
UPK3BP1-201ENST00000428678 SEC23AQ15436 765 aa21.22■□□□□ 0.99
UPK3BP1-201ENST00000428678 SMC5Q8IY18 1101 aa21.22■□□□□ 0.99
UPK3BP1-201ENST00000428678 BANK1Q8NDB2 785 aa21.22■□□□□ 0.99
UPK3BP1-201ENST00000428678 RNPEPQ9H4A4 650 aa21.22■□□□□ 0.99
UPK3BP1-201ENST00000428678 OSBPL3Q9H4L5 887 aa21.22■□□□□ 0.99
UPK3BP1-201ENST00000428678 BCAS3Q9H6U6 928 aa21.22■□□□□ 0.99
UPK3BP1-201ENST00000428678 NLRC5Q86WI3 1866 aa21.22■□□□□ 0.99
UPK3BP1-201ENST00000428678 PALM3A6NDB9 673 aaPredicted RBP21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 GRXCR2A6NFK2 248 aa21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 HOXC8P31273 242 aa21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 TRAF1Q13077 416 aa21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 PUS10Q3MIT2 529 aaKnown RBP21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 GNPTABQ3T906 1256 aa21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 CYB5R4Q7L1T6 521 aa21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 TOP1MTQ969P6 601 aa21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 UIMC1Q96RL1 719 aa21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 PIGSQ96S52 555 aa21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 IFIH1Q9BYX4 1025 aaKnown RBP21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 OSBPL7Q9BZF2 842 aa21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 RWDD1Q9H446 243 aaPredicted RBP21.21■□□□□ 0.99
UPK3BP1-201ENST00000428678 DOCK5Q9H7D0 1870 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 TRIOO75962 3097 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 PRR33A8MZF0 331 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 H3BNC9 293 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 CAND2O75155 1236 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 GNAT1P11488 350 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 ALADP13716 330 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 TCEAL5Q5H9L2 206 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 TMEM192Q8IY95 271 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 NEK9Q8TD19 979 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 USP26Q9BXU7 913 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 SETD4Q9NVD3 440 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 C5orf42Q9H799 3197 aa21.2■□□□□ 0.98
UPK3BP1-201ENST00000428678 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.19■□□□□ 0.98
UPK3BP1-201ENST00000428678 SLC35G1Q2M3R5 365 aa21.19■□□□□ 0.98
UPK3BP1-201ENST00000428678 CYFIP1Q7L576 1253 aa21.19■□□□□ 0.98
UPK3BP1-201ENST00000428678 KAT6AQ92794 2004 aa21.19■□□□□ 0.98
UPK3BP1-201ENST00000428678 NUCB1Q02818 461 aa21.18■□□□□ 0.98
UPK3BP1-201ENST00000428678 NEDD9Q14511 834 aa21.18■□□□□ 0.98
UPK3BP1-201ENST00000428678 GRM4Q14833 912 aa21.18■□□□□ 0.98
UPK3BP1-201ENST00000428678 CSPP1Q1MSJ5 1256 aa21.18■□□□□ 0.98
UPK3BP1-201ENST00000428678 METTL7BQ6UX53 244 aa21.18■□□□□ 0.98
UPK3BP1-201ENST00000428678 TRIM50Q86XT4 487 aa21.18■□□□□ 0.98
UPK3BP1-201ENST00000428678 PABPC5Q96DU9 382 aaKnown RBP21.18■□□□□ 0.98
UPK3BP1-201ENST00000428678 NSUN3Q9H649 340 aaKnown RBP21.18■□□□□ 0.98
UPK3BP1-201ENST00000428678 RIOX1Q9H6W3 641 aa21.18■□□□□ 0.98
UPK3BP1-201ENST00000428678 RALGAPA2Q2PPJ7 1873 aa21.18■□□□□ 0.98
UPK3BP1-201ENST00000428678 MRPS9P82933 396 aaKnown RBP21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 ARHGAP4P98171 946 aa21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 TRDNQ13061 729 aa21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 UTP14CQ5TAP6 766 aaKnown RBP21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 APBB2Q92870 758 aa21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 INPP4AQ96PE3 977 aaPredicted RBP21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 GPR20Q99678 358 aa21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 RTEL1Q9NZ71 1219 aa21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 ZNF215Q9UL58 517 aaPredicted RBP21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 FAM50BQ9Y247 325 aa21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 COL4A6Q14031 1691 aa21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 WDFY4Q6ZS81 3184 aa21.17■□□□□ 0.98
UPK3BP1-201ENST00000428678 PNMA6FA0A0J9YX94 578 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 SPATA31C2B4DYI2 1134 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 IFIT3O14879 490 aaKnown RBP21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 STAM2O75886 525 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 ICAM3P32942 547 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 CTNNB1P35222 781 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 SP4Q02446 784 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 SEMA3FQ13275 785 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 FIBCD1Q8N539 461 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 PIBF1Q8WXW3 757 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 IL17RAQ96F46 866 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 IL25Q9H293 177 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 CLDND1Q9NY35 253 aa21.16■□□□□ 0.98
UPK3BP1-201ENST00000428678 FRMPD4Q14CM0 1322 aa21.15■□□□□ 0.98
UPK3BP1-201ENST00000428678 ERICH2A1L162 156 aa21.15■□□□□ 0.98
UPK3BP1-201ENST00000428678 FIBPO43427 364 aa21.15■□□□□ 0.98
UPK3BP1-201ENST00000428678 DCXO43602 365 aa21.15■□□□□ 0.98
UPK3BP1-201ENST00000428678 CYTH3O43739 400 aa21.15■□□□□ 0.98
UPK3BP1-201ENST00000428678 AAMPQ13685 434 aa21.15■□□□□ 0.98
UPK3BP1-201ENST00000428678 LMBR1Q8WVP7 490 aa21.15■□□□□ 0.98
UPK3BP1-201ENST00000428678 IGHDP01880 384 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms