RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 PGBD1Q96JS3 809 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 INPP4AQ96PE3 977 aaPredicted RBP16.45■□□□□ 0.22
UBXN11-207ENST00000374223 TSPYL2Q9H2G4 693 aaPredicted RBP16.45■□□□□ 0.22
UBXN11-207ENST00000374223 MLXIPQ9HAP2 919 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 FAM217BQ9NTX9 383 aaPredicted RBP16.45■□□□□ 0.22
UBXN11-207ENST00000374223 PCDHA11Q9Y5I1 949 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 SELPP16109 830 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 COL9A1P20849 921 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 ICAM3P32942 547 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 FUT2Q10981 343 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 BFSP2Q13515 415 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 FANCBQ8NB91 859 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 SMARCC2Q8TAQ2 1214 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 GPR20Q99678 358 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 PKD2L1Q9P0L9 805 aa16.45■□□□□ 0.22
UBXN11-207ENST00000374223 CNTNAP5Q8WYK1 1306 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 TREHO43280 583 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 PPFIA4O75335 1185 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 ITGB5P18084 799 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 CDC27P30260 824 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 WDR5P61964 334 aaKnown RBP16.44■□□□□ 0.22
UBXN11-207ENST00000374223 UTP14CQ5TAP6 766 aaKnown RBP16.44■□□□□ 0.22
UBXN11-207ENST00000374223 WWC2Q6AWC2 1192 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 APOA5Q6Q788 366 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 SAMD3Q8N6K7 520 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 ZBTB10Q96DT7 871 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 NEK1Q96PY6 1258 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 UHRF1Q96T88 793 aaPredicted RBP16.44■□□□□ 0.22
UBXN11-207ENST00000374223 RNPEPQ9H4A4 650 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 SLC12A7Q9Y666 1083 aa16.44■□□□□ 0.22
UBXN11-207ENST00000374223 PIK3CDO00329 1044 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 SMIM10L2AP0DMW4 78 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 SMIM10L2BP0DMW5 78 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 SMARCA1P28370 1054 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 KIF5BP33176 963 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 RBL2Q08999 1139 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 PCNX4Q63HM2 1172 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.43■□□□□ 0.224e-7■■■■■ 26.8
UBXN11-207ENST00000374223 SGMS1Q86VZ5 419 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 HERC6Q8IVU3 1022 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 CYP2W1Q8TAV3 490 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 AFAP1L1Q8TED9 768 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 MTA3Q9BTC8 594 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 TMEM260Q9NX78 707 aa16.43■□□□□ 0.22
UBXN11-207ENST00000374223 WDR81Q562E7 1941 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 H3BRB1 525 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 PPFIA3O75145 1194 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 CXCL10P02778 98 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 TGFB3P10600 412 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 HOXC8P31273 242 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 RFC2P35250 354 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 TAP1Q03518 808 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 PTK7Q13308 1070 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 KCNV1Q6PIU1 500 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 HEATR3Q7Z4Q2 680 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 CAGE1Q8TC20 777 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 UIMC1Q96RL1 719 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 TUT1Q9H6E5 874 aaKnown RBP16.42■□□□□ 0.22
UBXN11-207ENST00000374223 PSTPIP2Q9H939 334 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 SETD4Q9NVD3 440 aa16.42■□□□□ 0.22
UBXN11-207ENST00000374223 SEC63Q9UGP8 760 aaKnown RBP16.42■□□□□ 0.22
UBXN11-207ENST00000374223 GSTTP1A0A1W2PQM5 241 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 FIBPO43427 364 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 CDC45O75419 566 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 ACTN1P12814 892 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 KCNA2P16389 499 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 AAK1Q2M2I8 961 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 FAM117BQ6P1L5 589 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 METTL7BQ6UX53 244 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 SERINC5Q86VE9 423 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 TMTC2Q8N394 836 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 MICALL1Q8N3F8 863 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 LZTS2Q9BRK4 669 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 KATNAL1Q9BW62 490 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 PCDHA6Q9UN73 950 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 PCDHA8Q9Y5H6 950 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 UBIAD1Q9Y5Z9 338 aa16.41■□□□□ 0.22
UBXN11-207ENST00000374223 ATG2AQ2TAZ0 1938 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 CTSHP09668 335 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 POU3F3P20264 500 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-207ENST00000374223 THPOP40225 353 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 GNAQP50148 359 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 RUFY4Q6ZNE9 571 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 DHX32Q7L7V1 743 aaKnown RBP16.4■□□□□ 0.22
UBXN11-207ENST00000374223 PHOSPHO2Q8TCD6 241 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 CUL5Q93034 780 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 ATP6V0A1Q93050 837 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 SLC9A7Q96T83 725 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 SNX14Q9Y5W7 946 aa16.4■□□□□ 0.22
UBXN11-207ENST00000374223 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-207ENST00000374223 EVPLQ92817 2033 aa16.39■□□□□ 0.21
UBXN11-207ENST00000374223 KLF18A0A0U1RQI7 1052 aa16.39■□□□□ 0.21
UBXN11-207ENST00000374223 C17orf102A2RUQ5 167 aa16.39■□□□□ 0.21
UBXN11-207ENST00000374223 NOP56O00567 594 aaKnown RBP16.39■□□□□ 0.21
UBXN11-207ENST00000374223 GTPBP6O43824 516 aaPredicted RBP16.39■□□□□ 0.21
UBXN11-207ENST00000374223 ADD1P35611 737 aaKnown RBP16.39■□□□□ 0.21
UBXN11-207ENST00000374223 ADAM17P78536 824 aa16.39■□□□□ 0.21
UBXN11-207ENST00000374223 TRAF1Q13077 416 aa16.39■□□□□ 0.21
UBXN11-207ENST00000374223 MKRN4PQ13434 485 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms