RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 MSH4O15457 936 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 KPNA6O60684 536 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 PPFIA4O75335 1185 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 FARP2O94887 1054 aaPredicted RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 BAG4O95429 457 aaKnown RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 C6orf222P0C671 652 aaPredicted RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 ZSCAN22P10073 491 aaPredicted RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 ATP2B1P20020 1258 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 TOB1P50616 345 aaPredicted RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 RESTQ13127 1097 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 GNASQ5JWF2 1037 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 GJC2Q5T442 439 aaPredicted RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 CYFIP1Q7L576 1253 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 FERMT3Q86UX7 667 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 SLFN12Q8IYM2 578 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 PPTC7Q8NI37 304 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 LENG1Q96BZ8 264 aaPredicted RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 SPATA33Q96N06 139 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 KCNMB3Q9NPA1 279 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 LRRC37A2A6NM11 1700 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 CTAGE5O15320 804 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 DHX15O43143 795 aaKnown RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 MARCH6O60337 910 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 NEMFO60524 1076 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 LRRC41Q15345 812 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 FSCN1Q16658 493 aaKnown RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 CCSAPQ6IQ19 270 aaPredicted RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 ETNPPLQ8TBG4 499 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 SLC5A5Q92911 643 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 JPH1Q9HDC5 661 aaPredicted RBP17.4■□□□□ 0.38
SEC13-201ENST00000337354 TCEAL9Q9UHQ7 104 aa17.4■□□□□ 0.38
SEC13-201ENST00000337354 MOXD2PA6NHM9 499 aa17.39■□□□□ 0.37
SEC13-201ENST00000337354 KBTBD13C9JR72 458 aa17.39■□□□□ 0.37
SEC13-201ENST00000337354 LAD1O00515 517 aa17.39■□□□□ 0.37
SEC13-201ENST00000337354 NOP56O00567 594 aaKnown RBP17.39■□□□□ 0.37
SEC13-201ENST00000337354 SLC37A4O43826 429 aa17.39■□□□□ 0.37
SEC13-201ENST00000337354 MCM7P33993 719 aa17.39■□□□□ 0.37
SEC13-201ENST00000337354 ITGB3BPQ13352 177 aaPredicted RBP17.39■□□□□ 0.37
SEC13-201ENST00000337354 ZNF174Q15697 407 aa17.39■□□□□ 0.37
SEC13-201ENST00000337354 HSDL1Q3SXM5 330 aa17.39■□□□□ 0.37
SEC13-201ENST00000337354 AFG1LQ8WV93 481 aa17.39■□□□□ 0.37
SEC13-201ENST00000337354 PKD2L1Q9P0L9 805 aa17.39■□□□□ 0.37
SEC13-201ENST00000337354 SLC9A2Q9UBY0 812 aa17.39■□□□□ 0.37
SEC13-201ENST00000337354 BRCA2P51587 3418 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 GAS7O60861 476 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 BRD1O95696 1058 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 BMP15O95972 392 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 NUCB2P80303 420 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 KRT76Q01546 638 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 KCNA10Q16322 511 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 CALCRLQ16602 461 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 DGKDQ16760 1214 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 LRCH2Q5VUJ6 765 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 ZNF746Q6NUN9 644 aaPredicted RBP17.38■□□□□ 0.37
SEC13-201ENST00000337354 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 SEPT1Q8WYJ6 367 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 HAS1Q92839 578 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 MTMR9Q96QG7 549 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 GPR20Q99678 358 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 TEKT3Q9BXF9 490 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 BCAS3Q9H6U6 928 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.38■□□□□ 0.37
SEC13-201ENST00000337354 POLR3EQ9NVU0 708 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 PCDHB6Q9Y5E3 794 aa17.38■□□□□ 0.37
SEC13-201ENST00000337354 WNT7AO00755 349 aa17.37■□□□□ 0.37
SEC13-201ENST00000337354 PSMD10O75832 226 aa17.37■□□□□ 0.37
SEC13-201ENST00000337354 CABYRO75952 493 aa17.37■□□□□ 0.37
SEC13-201ENST00000337354 ATG7O95352 703 aa17.37■□□□□ 0.37
SEC13-201ENST00000337354 F13A1P00488 732 aa17.37■□□□□ 0.37
SEC13-201ENST00000337354 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
SEC13-201ENST00000337354 MMP3P08254 477 aa17.37■□□□□ 0.37
SEC13-201ENST00000337354 HOXD8P13378 290 aaPredicted RBP17.37■□□□□ 0.37
SEC13-201ENST00000337354 PTGS1P23219 599 aa17.37■□□□□ 0.37
SEC13-201ENST00000337354 DDIT3P35638 169 aa17.37■□□□□ 0.37
SEC13-201ENST00000337354 SMAP1Q8IYB5 467 aaPredicted RBP17.37■□□□□ 0.37
SEC13-201ENST00000337354 PCDHA12Q9UN75 941 aa17.37■□□□□ 0.37
SEC13-201ENST00000337354 CEP131Q9UPN4 1083 aa17.37■□□□□ 0.37
SEC13-201ENST00000337354 PDE4DIPQ5VU43 2346 aa17.36■□□□□ 0.37
SEC13-201ENST00000337354 MYADML2A6NDP7 307 aa17.36■□□□□ 0.37
SEC13-201ENST00000337354 ASGR1P07306 291 aa17.36■□□□□ 0.37
SEC13-201ENST00000337354 ACLYP53396 1101 aa17.36■□□□□ 0.37
SEC13-201ENST00000337354 BEX3Q00994 111 aa17.36■□□□□ 0.37
SEC13-201ENST00000337354 PKP1Q13835 747 aa17.36■□□□□ 0.37
SEC13-201ENST00000337354 ATL3Q6DD88 541 aa17.36■□□□□ 0.37
SEC13-201ENST00000337354 PHF24Q9UPV7 400 aa17.36■□□□□ 0.37
SEC13-201ENST00000337354 ATP6V1DQ9Y5K8 247 aa17.36■□□□□ 0.37
SEC13-201ENST00000337354 OR52Z1P0C646 297 aa17.35■□□□□ 0.37
SEC13-201ENST00000337354 SFNP31947 248 aa17.35■□□□□ 0.37
SEC13-201ENST00000337354 ACTR2P61160 394 aa17.35■□□□□ 0.37
SEC13-201ENST00000337354 PTGDRQ13258 359 aa17.35■□□□□ 0.37
SEC13-201ENST00000337354 PPP2R5CQ13362 524 aa17.35■□□□□ 0.37
SEC13-201ENST00000337354 B3GNT9Q6UX72 402 aa17.35■□□□□ 0.37
SEC13-201ENST00000337354 C4orf32Q8N8J7 132 aa17.35■□□□□ 0.37
SEC13-201ENST00000337354 RDM1Q8NG50 284 aa17.35■□□□□ 0.37
SEC13-201ENST00000337354 GLT1D1Q96MS3 346 aa17.35■□□□□ 0.37
SEC13-201ENST00000337354 ZNF396Q96N95 335 aaPredicted RBP17.35■□□□□ 0.37
SEC13-201ENST00000337354 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
SEC13-201ENST00000337354 CIZ1Q9ULV3 898 aaPredicted RBP17.35■□□□□ 0.37
SEC13-201ENST00000337354 ELP1O95163 1332 aa17.35■□□□□ 0.37
SEC13-201ENST00000337354 ALPK3Q96L96 1907 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms