RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 GLI3P10071 1580 aa16.46■□□□□ 0.23
UBE2D4-201ENST00000222402 RGL2O15211 777 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 FXR2P51116 673 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 CETN1Q12798 172 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 RPS6KA1Q15418 735 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 CDC42EP5Q6NZY7 148 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 CRAMP1Q96RY5 1269 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 NUDT12Q9BQG2 462 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 ARHGEF10LQ9HCE6 1279 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 AFF2P51816 1311 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 H0YHG0 523 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 MMP10P09238 476 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 RHBDL3P58872 404 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 ARHGAP4P98171 946 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 BEND6Q5SZJ8 279 aaPredicted RBP16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 PPP1R18Q6NYC8 613 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 BHMT2Q9H2M3 363 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 TSKSQ9UJT2 592 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 KCNK3O14649 394 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 IL1R1P14778 569 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 NPR1P16066 1061 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 NFIAQ12857 509 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 AMIGO3Q86WK7 504 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 IFT20Q8IY31 132 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 CSRNP1Q96S65 589 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 DHX36Q9H2U1 1008 aaKnown RBP16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 RABGAP1Q9Y3P9 1069 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 SFI1A8K8P3 1242 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 KRT13P13646 458 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 CYP2C19P33261 490 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 PPARDQ03181 441 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 CENPPQ6IPU0 288 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 PROM2Q8N271 834 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 HDAC9Q9UKV0 1011 aa16.45■□□□□ 0.22
UBE2D4-201ENST00000222402 TOGARAM1Q9Y4F4 1720 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 FLOT1O75955 427 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 APBA3O96018 575 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 CYP2J2P51589 502 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 GUCY2FP51841 1108 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 FAM107BQ9H098 131 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 FRMD4BQ9Y2L6 1034 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 GAS7O60861 476 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 N4BP1O75113 896 aaKnown RBP16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 FOSP01100 380 aaPredicted RBP16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 GH2P01242 217 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 SLURP2P0DP57 97 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 BMP3P12645 472 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 CDR1P51861 262 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 LMBR1Q8WVP7 490 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 TSPYL1Q9H0U9 437 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 GOPCQ9HD26 462 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 ITGB4P16144 1822 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 DUOX1Q9NRD9 1551 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 BCL9LQ86UU0 1499 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 F5H6K3 240 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 ZEB2O60315 1214 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 SERPING1P05155 500 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 KLRC3Q07444 240 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 ZFYVE27Q5T4F4 411 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 DDX4Q9NQI0 724 aaKnown RBP16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 BLOC1S4Q9NUP1 217 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 MKRN1Q9UHC7 482 aaKnown RBP16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 FAM184BQ9ULE4 1060 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 ATP6V0A2Q9Y487 856 aa16.44■□□□□ 0.22
UBE2D4-201ENST00000222402 CLRN2A0PK11 232 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 SLC35G1Q2M3R5 365 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 SYDE2Q5VT97 1194 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 TRAPPC11Q7Z392 1133 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 SFR1Q86XK3 245 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 ZNF507Q8TCN5 953 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 PNMA5Q96PV4 448 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 TDRD3Q9H7E2 651 aaKnown RBP16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 PPP1R1BQ9UD71 204 aaPredicted RBP16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 PLAGL2Q9UPG8 496 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 KIAA0754O94854 1291 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 GUCY2DQ02846 1103 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 GBP6Q6ZN66 633 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 U2AF1L4Q8WU68 220 aaKnown RBP16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 OSBPL9Q96SU4 736 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 SMARCAL1Q9NZC9 954 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 ARHGEF35A5YM69 484 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 PPIP5K2O43314 1243 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 IFFO1Q0D2I5 559 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 KCNH2Q12809 1159 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 PDXDC1Q6P996 788 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 WDR59Q6PJI9 974 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 MSANTD4Q8NCY6 345 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 PIGOQ8TEQ8 1089 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 CEP72Q9P209 647 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 SNX12Q9UMY4 172 aa16.43■□□□□ 0.22
UBE2D4-201ENST00000222402 ACTN2P35609 894 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 ARHGAP44Q17R89 818 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 PEX26Q7Z412 305 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 KCNK18Q7Z418 384 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 MYH6P13533 1939 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 EXOC3O60645 756 aa16.42■□□□□ 0.22
UBE2D4-201ENST00000222402 AFPP02771 609 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms