RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 USP17L17D6RBQ6 530 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 USP17L19D6RCP7 530 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 USP17L20D6RJB6 530 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 hCG_1984214I3L0E3 225 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 USO1O60763 962 aaKnown RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 ALDH1B1P30837 517 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 PDE6BP35913 854 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 MATR3P43243 847 aaKnown RBP eCLIP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 LRRC63Q05C16 580 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 GFPT1Q06210 699 aaPredicted RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 USP17L24Q0WX57 530 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 USP17L6PQ6QN14 398 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 FAM43BQ6ZT52 329 aaPredicted RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 CREG2Q8IUH2 290 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 SUGP1Q8IWZ8 645 aaKnown RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 ZNF713Q8N859 430 aaPredicted RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 RIN2Q8WYP3 895 aaPredicted RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 COA1Q9GZY4 146 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 SALL4Q9UJQ4 1053 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 PCDHA12Q9UN75 941 aa16.9■□□□□ 0.3
TGFB1-201ENST00000221930 RRP15Q9Y3B9 282 aaKnown RBP16.9■□□□□ 0.3
TGFB1-201ENST00000221930 IGKV6D-41A0A0C4DH26 115 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 NPHP3-ACAD11A0A0J9YXS1 232 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 E9PMD0 336 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 TRAF5O00463 557 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 EHHADHQ08426 723 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 COASYQ13057 564 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 EZH2Q15910 746 aaKnown RBP16.89■□□□□ 0.3
TGFB1-201ENST00000221930 TMEM119Q4V9L6 283 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 CACNA2D4Q7Z3S7 1137 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 NELFCDQ8IXH7 590 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 TRIM58Q8NG06 486 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 BAP1Q92560 729 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 DNAJC19Q96DA6 116 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 CRACR2AQ9BSW2 395 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 TSGA10Q9BZW7 698 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 USP40Q9NVE5 1235 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 EHD2Q9NZN4 543 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 SNX12Q9UMY4 172 aa16.89■□□□□ 0.3
TGFB1-201ENST00000221930 NFRKBQ6P4R8 1299 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 MYOCDQ8IZQ8 938 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 HDAC7Q8WUI4 952 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 CUL5Q93034 780 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 PSTPIP2Q9H939 334 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 NCK2O43639 380 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 TACC1O75410 805 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 FGFR1OPO95684 399 aaKnown RBP16.89■□□□□ 0.29
TGFB1-201ENST00000221930 SHMT1P34896 483 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 KCNMA1Q12791 1236 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 SHROOM1Q2M3G4 852 aaPredicted RBP16.89■□□□□ 0.29
TGFB1-201ENST00000221930 PPP4R3AQ6IN85 833 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 RPGRIP1Q96KN7 1286 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 PANK4Q9NVE7 773 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 KIAA1024Q9UPX6 916 aa16.89■□□□□ 0.29
TGFB1-201ENST00000221930 CCDC189A1A4V9 331 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 FAM196BA6NMK8 535 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 PPEF1O14829 653 aaPredicted RBP16.88■□□□□ 0.29
TGFB1-201ENST00000221930 MAGEA9P43362 315 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 CLK2P49760 499 aaKnown RBP16.88■□□□□ 0.29
TGFB1-201ENST00000221930 RASSF7Q02833 373 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 DOK7Q18PE1 504 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 MSL3Q8N5Y2 521 aaKnown RBP16.88■□□□□ 0.29
TGFB1-201ENST00000221930 GOLGA5Q8TBA6 731 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 TSG101Q99816 390 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 PSD3Q9NYI0 1048 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 BUB1O43683 1085 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 MAGEA1P43355 309 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 NFIAQ12857 509 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 CCDC40Q4G0X9 1142 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 TDRD12Q587J7 1177 aaKnown RBP16.88■□□□□ 0.29
TGFB1-201ENST00000221930 FAM71BQ8TC56 605 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 FAM204AQ9H8W3 233 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 HPCAL4Q9UM19 191 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
TGFB1-201ENST00000221930 ZBTB5O15062 677 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 SYF2O95926 243 aaKnown RBP16.87■□□□□ 0.29
TGFB1-201ENST00000221930 MRPL12P52815 198 aaKnown RBP16.87■□□□□ 0.29
TGFB1-201ENST00000221930 FAM26FQ5R3K3 315 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 POTEB3A0JP26 581 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 TARSL2A2RTX5 802 aaKnown RBP16.87■□□□□ 0.29
TGFB1-201ENST00000221930 POTECB2RU33 542 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 IRF6O14896 467 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 RNF40O75150 1001 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 STAT3P40763 770 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 SLC1A4P43007 532 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 FKBP1AP62942 108 aaKnown RBP16.87■□□□□ 0.29
TGFB1-201ENST00000221930 FKBP3Q00688 224 aaKnown RBP16.87■□□□□ 0.29
TGFB1-201ENST00000221930 SLC7A5Q01650 507 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 ENOX2Q16206 610 aaKnown RBP16.87■□□□□ 0.29
TGFB1-201ENST00000221930 MAP9Q49MG5 647 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 POTEBQ6S5H4 581 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.87■□□□□ 0.29
TGFB1-201ENST00000221930 PACS2Q86VP3 889 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 ZFPM1Q8IX07 1006 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 RNF217Q8TC41 542 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 LRRC1Q9BTT6 524 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 COL4A3BPQ9Y5P4 624 aa16.87■□□□□ 0.29
TGFB1-201ENST00000221930 CACNB3P54284 484 aa16.86■□□□□ 0.29
TGFB1-201ENST00000221930 NAP1L1P55209 391 aaKnown RBP16.86■□□□□ 0.29
TGFB1-201ENST00000221930 ARID5AQ03989 594 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms