RNA–Protein interactions for RNA: snR80

snR80, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR80, Length 171 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR80	snR80	APE2	P32454	952 aa	Known RBP	0.91	□□□□□ -2.26
snR80	snR80	MAL33	P38157	468 aa		0.91	□□□□□ -2.26
snR80	snR80	CPR7	P47103	393 aa		0.91	□□□□□ -2.26
snR80	snR80	RRT6	P53117	311 aa	Predicted RBP	0.91	□□□□□ -2.26
snR80	snR80	COQ9	Q05779	260 aa		0.91	□□□□□ -2.26
snR80	snR80	CMS1	Q07897	291 aa	Known RBP	0.91	□□□□□ -2.26
snR80	snR80	YPR096C	O13587	100 aa		0.9	□□□□□ -2.27
snR80	snR80	CDC50	P25656	391 aa		0.9	□□□□□ -2.27
snR80	snR80	HIR2	P32480	875 aa		0.9	□□□□□ -2.27
snR80	snR80	YCR041W	P37265	110 aa		0.9	□□□□□ -2.27
snR80	snR80	MBB1	P39534	108 aa		0.9	□□□□□ -2.27
snR80	snR80	FRT2	P39734	528 aa		0.9	□□□□□ -2.27
snR80	snR80	OXA1	P39952	402 aa		0.9	□□□□□ -2.27
snR80	snR80	SYG1	P40528	902 aa		0.9	□□□□□ -2.27
snR80	snR80	YFR057W	P43625	151 aa		0.9	□□□□□ -2.27
snR80	snR80	AIM22	P47051	409 aa		0.9	□□□□□ -2.27
snR80	snR80	YIP1	P53039	248 aa		0.9	□□□□□ -2.27
snR80	snR80	PEX8	P53248	589 aa		0.9	□□□□□ -2.27
snR80	snR80	TRM8	Q12009	286 aa		0.9	□□□□□ -2.27
snR80	snR80	COR1	P07256	457 aa		0.89	□□□□□ -2.27
snR80	snR80	MSR1	P38714	643 aa		0.89	□□□□□ -2.27
snR80	snR80	GAT2	P40209	560 aa		0.89	□□□□□ -2.27
snR80	snR80	YIR035C	P40579	254 aa		0.89	□□□□□ -2.27
snR80	snR80	AHC1	Q12433	566 aa		0.89	□□□□□ -2.27
snR80	snR80	YOL087C	Q99247	1116 aa		0.89	□□□□□ -2.27
snR80	snR80	GYP6	P32806	458 aa		0.88	□□□□□ -2.27
snR80	snR80	WSS1	P38838	269 aa		0.88	□□□□□ -2.27
snR80	snR80	ARC1	P46672	376 aa	Known RBP	0.88	□□□□□ -2.27
snR80	snR80	BIR1	P47134	954 aa		0.88	□□□□□ -2.27
snR80	snR80	PGU1	P47180	361 aa		0.88	□□□□□ -2.27
snR80	snR80	YNR048W	P53740	393 aa		0.88	□□□□□ -2.27
snR80	snR80	YET2	Q04210	160 aa		0.88	□□□□□ -2.27
snR80	snR80	MFB1	Q04922	465 aa		0.88	□□□□□ -2.27
snR80	snR80	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
snR80	snR80	RAV1	P47104	1357 aa		0.87	□□□□□ -2.27
snR80	snR80	ATP4	P05626	244 aa		0.87	□□□□□ -2.27
snR80	snR80	ELO2	P25358	347 aa		0.87	□□□□□ -2.27
snR80	snR80	ITR1	P30605	584 aa		0.87	□□□□□ -2.27
snR80	snR80	BAT1	P38891	393 aa	Known RBP	0.87	□□□□□ -2.27
snR80	snR80	AFG3	P39925	761 aa		0.87	□□□□□ -2.27
snR80	snR80	ALG5	P40350	334 aa		0.87	□□□□□ -2.27
snR80	snR80	UPF3	P48412	387 aa	Known RBP	0.87	□□□□□ -2.27
snR80	snR80	NCS2	P53923	493 aa	Predicted RBP	0.87	□□□□□ -2.27
snR80	snR80	VID22	Q05934	901 aa		0.87	□□□□□ -2.27
snR80	snR80	YPR022C	Q12139	1133 aa		0.87	□□□□□ -2.27
snR80	snR80	TPI1	P00942	248 aa	Known RBP	0.86	□□□□□ -2.27
snR80	snR80	ARG4	P04076	463 aa	Predicted RBP	0.86	□□□□□ -2.27
snR80	snR80	SNF1	P06782	633 aa	Known RBP	0.86	□□□□□ -2.27
snR80	snR80	PEP3	P27801	918 aa		0.86	□□□□□ -2.27
snR80	snR80	UTR5	P32630	166 aa		0.86	□□□□□ -2.27
snR80	snR80	ECT1	P33412	323 aa		0.86	□□□□□ -2.27
snR80	snR80	MRPL27	P36526	146 aa	Predicted RBP	0.86	□□□□□ -2.27
snR80	snR80	YJL144W	P47009	104 aa		0.86	□□□□□ -2.27
snR80	snR80	YGR067C	P53243	804 aa		0.86	□□□□□ -2.27
snR80	snR80	RIF2	Q06208	395 aa		0.86	□□□□□ -2.27
snR80	snR80	SSB1	P11484	613 aa	Known RBP	0.85	□□□□□ -2.27
snR80	snR80	MSI1	P13712	422 aa		0.85	□□□□□ -2.27
snR80	snR80	SGS1	P35187	1447 aa		0.85	□□□□□ -2.27
snR80	snR80	YER010C	P40011	234 aa		0.85	□□□□□ -2.27
snR80	snR80	SSB2	P40150	613 aa	Known RBP	0.85	□□□□□ -2.27
snR80	snR80	SIP4	P46954	829 aa		0.85	□□□□□ -2.27
snR80	snR80	ECM27	P47144	725 aa		0.85	□□□□□ -2.27
snR80	snR80	SLG1	P54867	378 aa		0.85	□□□□□ -2.27
snR80	snR80	SGT1	Q08446	395 aa		0.85	□□□□□ -2.27
snR80	snR80	SMF3	Q12078	473 aa	Predicted RBP	0.85	□□□□□ -2.27
snR80	snR80	YDR061W	Q12298	539 aa		0.85	□□□□□ -2.27
snR80	snR80	AGA2	P32781	87 aa		0.84	□□□□□ -2.27
snR80	snR80	SKN1	P33336	771 aa		0.84	□□□□□ -2.27
snR80	snR80	MUM2	P38236	366 aa		0.84	□□□□□ -2.27
snR80	snR80	LCL3	P53153	274 aa		0.84	□□□□□ -2.27
snR80	snR80	NRM1	P53718	249 aa		0.84	□□□□□ -2.27
snR80	snR80	IPI3	P53877	555 aa		0.84	□□□□□ -2.27
snR80	snR80	RHO5	P53879	331 aa	Known RBP	0.84	□□□□□ -2.27
snR80	snR80	YML037C	Q03703	340 aa		0.84	□□□□□ -2.27
snR80	snR80	CDC24	P11433	854 aa	Predicted RBP	0.83	□□□□□ -2.28
snR80	snR80	STP2	P38704	541 aa		0.83	□□□□□ -2.28
snR80	snR80	CHL4	P38907	458 aa		0.83	□□□□□ -2.28
snR80	snR80	JLP2	P40206	208 aa		0.83	□□□□□ -2.28
snR80	snR80	BNA1	P47096	177 aa		0.83	□□□□□ -2.28
snR80	snR80	OCA1	P50946	238 aa	Predicted RBP	0.83	□□□□□ -2.28
snR80	snR80	VID30	P53076	958 aa		0.83	□□□□□ -2.28
snR80	snR80	FRE4	P53746	719 aa		0.83	□□□□□ -2.28
snR80	snR80	FIN1	Q03898	291 aa		0.83	□□□□□ -2.28
snR80	snR80	RAD30	Q04049	632 aa		0.83	□□□□□ -2.28
snR80	snR80	VPS38	Q05919	439 aa		0.83	□□□□□ -2.28
snR80	snR80	SNU66	Q12420	587 aa	Predicted RBP	0.83	□□□□□ -2.28
snR80	snR80	RTP1	Q12751	981 aa		0.83	□□□□□ -2.28
snR80	snR80	RPS19A	P07280	144 aa	Known RBP	0.82	□□□□□ -2.28
snR80	snR80	RPS19B	P07281	144 aa	Predicted RBP	0.82	□□□□□ -2.28
snR80	snR80	ECM25	P32525	599 aa		0.82	□□□□□ -2.28
snR80	snR80	DSL1	P53847	754 aa		0.82	□□□□□ -2.28
snR80	snR80	NUP116	Q02630	1113 aa		0.82	□□□□□ -2.28
snR80	snR80	SNO4	Q04902	237 aa		0.82	□□□□□ -2.28
snR80	snR80	HSP33	Q08914	237 aa	Known RBP	0.82	□□□□□ -2.28
snR80	snR80	HSP32	Q08992	237 aa		0.82	□□□□□ -2.28
snR80	snR80	HIS4	P00815	799 aa	Known RBP	0.81	□□□□□ -2.28
snR80	snR80	ZRC1	P20107	442 aa		0.81	□□□□□ -2.28
snR80	snR80	SAG1	P20840	650 aa		0.81	□□□□□ -2.28
snR80	snR80	SCC4	P40090	624 aa		0.81	□□□□□ -2.28
snR80	snR80	YIL029C	P40538	142 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms