RNA–Protein interactions for RNA: YPR124W

CTR1, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR1, Length 1,221 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR1	YPR124W	MES1	P00958	751 aa	Known RBP	4.94	□□□□□ -1.62
CTR1	YPR124W	CPR3	P25719	182 aa		4.94	□□□□□ -1.62
CTR1	YPR124W	AGA1	P32323	725 aa		4.94	□□□□□ -1.62
CTR1	YPR124W	CMC1	P36064	111 aa		4.94	□□□□□ -1.62
CTR1	YPR124W	YHR218W	P38899	603 aa		4.94	□□□□□ -1.62
CTR1	YPR124W	YMR147W	P40218	223 aa	Known RBP	4.94	□□□□□ -1.62
CTR1	YPR124W	ELP2	P42935	788 aa		4.94	□□□□□ -1.62
CTR1	YPR124W	TAP42	Q04372	366 aa		4.94	□□□□□ -1.62
CTR1	YPR124W	COG4	Q06096	861 aa		4.94	□□□□□ -1.62
CTR1	YPR124W	RKM5	Q12367	367 aa		4.94	□□□□□ -1.62
CTR1	YPR124W	RNA14	P25298	677 aa	Known RBP	4.93	□□□□□ -1.62
CTR1	YPR124W	PUT3	P25502	979 aa	Predicted RBP	4.93	□□□□□ -1.62
CTR1	YPR124W	RPN12	P32496	274 aa		4.93	□□□□□ -1.62
CTR1	YPR124W	FAU1	P40099	211 aa		4.93	□□□□□ -1.62
CTR1	YPR124W	NDE1	P40215	560 aa		4.93	□□□□□ -1.62
CTR1	YPR124W	GWT1	P47026	490 aa		4.93	□□□□□ -1.62
CTR1	YPR124W	RIM20	Q12033	661 aa		4.93	□□□□□ -1.62
CTR1	YPR124W	GRX6	Q12438	231 aa		4.93	□□□□□ -1.62
CTR1	YPR124W	RTP1	Q12751	981 aa		4.93	□□□□□ -1.62
CTR1	YPR124W	GPI10	P30777	616 aa		4.92	□□□□□ -1.62
CTR1	YPR124W	TUL1	P36096	758 aa		4.92	□□□□□ -1.62
CTR1	YPR124W	SYG1	P40528	902 aa		4.92	□□□□□ -1.62
CTR1	YPR124W	URB2	P47108	1174 aa		4.92	□□□□□ -1.62
CTR1	YPR124W	YGL108C	P53139	140 aa		4.92	□□□□□ -1.62
CTR1	YPR124W	RQC1	Q05468	723 aa	Known RBP	4.92	□□□□□ -1.62
CTR1	YPR124W	TSR2	Q06672	205 aa	Known RBP	4.92	□□□□□ -1.62
CTR1	YPR124W	ROX1	P25042	368 aa		4.91	□□□□□ -1.62
CTR1	YPR124W	HXT14	P42833	540 aa		4.91	□□□□□ -1.62
CTR1	YPR124W	YJL132W	P47014	750 aa		4.91	□□□□□ -1.62
CTR1	YPR124W	OCA1	P50946	238 aa	Predicted RBP	4.91	□□□□□ -1.62
CTR1	YPR124W	SCW10	Q04951	389 aa		4.91	□□□□□ -1.62
CTR1	YPR124W	TLG2	Q08144	397 aa		4.91	□□□□□ -1.62
CTR1	YPR124W	CKA1	P15790	372 aa		4.9	□□□□□ -1.63
CTR1	YPR124W	BUB3	P26449	341 aa		4.9	□□□□□ -1.63
CTR1	YPR124W	PMT1	P33775	817 aa		4.9	□□□□□ -1.63
CTR1	YPR124W	TIF5	P38431	405 aa	Known RBP	4.9	□□□□□ -1.63
CTR1	YPR124W	IDP2	P41939	412 aa		4.9	□□□□□ -1.63
CTR1	YPR124W	EAF6	P47128	113 aa		4.9	□□□□□ -1.63
CTR1	YPR124W	RRD2	Q12461	358 aa		4.9	□□□□□ -1.63
CTR1	YPR124W	CTF3	Q12748	733 aa		4.9	□□□□□ -1.63
CTR1	YPR124W	AUS1	Q08409	1394 aa		4.9	□□□□□ -1.63
CTR1	YPR124W	SMF1	P38925	575 aa		4.89	□□□□□ -1.63
CTR1	YPR124W	VMA13	P41807	478 aa	Known RBP	4.89	□□□□□ -1.63
CTR1	YPR124W	MRPL19	P53875	158 aa		4.89	□□□□□ -1.63
CTR1	YPR124W	ARK1	P53974	638 aa		4.89	□□□□□ -1.63
CTR1	YPR124W	VPS72	Q03388	795 aa		4.89	□□□□□ -1.63
CTR1	YPR124W	TAF11	Q04226	346 aa		4.89	□□□□□ -1.63
CTR1	YPR124W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
CTR1	YPR124W	MLP1	Q02455	1875 aa	Known RBP	4.88	□□□□□ -1.63
CTR1	YPR124W	MET17	P06106	444 aa		4.88	□□□□□ -1.63
CTR1	YPR124W	CDC31	P06704	161 aa	Known RBP	4.88	□□□□□ -1.63
CTR1	YPR124W	LPD1	P09624	499 aa	Known RBP	4.88	□□□□□ -1.63
CTR1	YPR124W	SPB1	P25582	841 aa	Predicted RBP	4.88	□□□□□ -1.63
CTR1	YPR124W	POP1	P41812	875 aa		4.88	□□□□□ -1.63
CTR1	YPR124W	MSO1	P53604	210 aa	Known RBP	4.88	□□□□□ -1.63
CTR1	YPR124W	BOR1	P53838	576 aa		4.88	□□□□□ -1.63
CTR1	YPR124W	RPO41	P13433	1351 aa	Known RBP	4.88	□□□□□ -1.63
CTR1	YPR124W	RHO2	P06781	192 aa		4.87	□□□□□ -1.63
CTR1	YPR124W	GCD10	P41814	478 aa		4.87	□□□□□ -1.63
CTR1	YPR124W	SOV1	Q04748	898 aa		4.87	□□□□□ -1.63
CTR1	YPR124W	YLL056C	Q12177	298 aa		4.87	□□□□□ -1.63
CTR1	YPR124W	PMR1	P13586	950 aa		4.86	□□□□□ -1.63
CTR1	YPR124W	RAD14	P28519	371 aa		4.86	□□□□□ -1.63
CTR1	YPR124W	FRE2	P36033	711 aa		4.86	□□□□□ -1.63
CTR1	YPR124W	CBP4	P37267	147 aa		4.86	□□□□□ -1.63
CTR1	YPR124W	AVT5	P38176	459 aa		4.86	□□□□□ -1.63
CTR1	YPR124W	YBP1	P38315	674 aa		4.86	□□□□□ -1.63
CTR1	YPR124W	PCA1	P38360	1216 aa		4.86	□□□□□ -1.63
CTR1	YPR124W	OGG1	P53397	376 aa	Predicted RBP	4.86	□□□□□ -1.63
CTR1	YPR124W	MDM1	Q01846	1127 aa		4.86	□□□□□ -1.63
CTR1	YPR124W	RTN2	Q12443	393 aa		4.86	□□□□□ -1.63
CTR1	YPR124W	PGA3	Q12746	312 aa	Known RBP	4.86	□□□□□ -1.63
CTR1	YPR124W	YCL021W-A	Q96VH3	125 aa		4.86	□□□□□ -1.63
CTR1	YPR124W	LEU4	P06208	619 aa	Known RBP	4.85	□□□□□ -1.63
CTR1	YPR124W	CBS2	P14905	389 aa		4.85	□□□□□ -1.63
CTR1	YPR124W	FUN19	P28003	413 aa	Predicted RBP	4.85	□□□□□ -1.63
CTR1	YPR124W	GYP6	P32806	458 aa		4.85	□□□□□ -1.63
CTR1	YPR124W	OTU2	P38747	307 aa	Known RBP	4.85	□□□□□ -1.63
CTR1	YPR124W	YGR149W	P48236	432 aa		4.85	□□□□□ -1.63
CTR1	YPR124W	WSC2	P53832	503 aa		4.85	□□□□□ -1.63
CTR1	YPR124W	SIR4	P11978	1358 aa		4.84	□□□□□ -1.63
CTR1	YPR124W	SPS4	P09937	338 aa		4.84	□□□□□ -1.63
CTR1	YPR124W	RED1	P14291	827 aa		4.84	□□□□□ -1.63
CTR1	YPR124W	ATP10	P18496	279 aa		4.84	□□□□□ -1.63
CTR1	YPR124W	AFG1	P32317	509 aa		4.84	□□□□□ -1.63
CTR1	YPR124W	ERG3	P32353	365 aa		4.84	□□□□□ -1.63
CTR1	YPR124W	TFG2	P41896	400 aa	Predicted RBP	4.84	□□□□□ -1.63
CTR1	YPR124W	RRT5	P43607	289 aa		4.84	□□□□□ -1.63
CTR1	YPR124W	HNT3	Q08702	217 aa		4.84	□□□□□ -1.63
CTR1	YPR124W	CRM1	P30822	1084 aa	Known RBP	4.83	□□□□□ -1.64
CTR1	YPR124W	NDI1	P32340	513 aa		4.83	□□□□□ -1.64
CTR1	YPR124W	RSM22	P36056	628 aa		4.83	□□□□□ -1.64
CTR1	YPR124W	CAF40	P53829	373 aa		4.83	□□□□□ -1.64
CTR1	YPR124W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
CTR1	YPR124W	KTR5	P53966	522 aa	Predicted RBP	4.83	□□□□□ -1.64
CTR1	YPR124W	HIP1	P06775	603 aa		4.82	□□□□□ -1.64
CTR1	YPR124W	OSM1	P21375	501 aa	Known RBP	4.82	□□□□□ -1.64
CTR1	YPR124W	HXT3	P32466	567 aa	Known RBP	4.82	□□□□□ -1.64
CTR1	YPR124W	NPL6	P32832	435 aa		4.82	□□□□□ -1.64
CTR1	YPR124W	THI2	P38141	450 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms