RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	SWI3	P32591	825 aa		2.54	□□□□□ -2
RSA1	YPL193W	FRE1	P32791	686 aa		2.54	□□□□□ -2
RSA1	YPL193W	YKL097C	P34245	136 aa		2.54	□□□□□ -2
RSA1	YPL193W	RRN3	P36070	627 aa		2.54	□□□□□ -2
RSA1	YPL193W	ELO1	P39540	310 aa		2.54	□□□□□ -2
RSA1	YPL193W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.54	□□□□□ -2	not detected
RSA1	YPL193W	RPS7B	P48164	190 aa	Known RBP	2.54	□□□□□ -2
RSA1	YPL193W	ERG26	P53199	349 aa	Known RBP	2.54	□□□□□ -2
RSA1	YPL193W	ARK1	P53974	638 aa		2.54	□□□□□ -2
RSA1	YPL193W	MRPL51	Q06090	140 aa	Predicted RBP	2.54	□□□□□ -2
RSA1	YPL193W	SUE1	Q06524	206 aa		2.54	□□□□□ -2
RSA1	YPL193W	TSR2	Q06672	205 aa	Known RBP	2.54	□□□□□ -2
RSA1	YPL193W	LAA1	P39526	2014 aa		2.54	□□□□□ -2
RSA1	YPL193W	FOB1	O13329	566 aa		2.53	□□□□□ -2
RSA1	YPL193W	HHF1	P02309	103 aa	Known RBP	2.53	□□□□□ -2
RSA1	YPL193W	GFD2	P25370	566 aa	Known RBP	2.53	□□□□□ -2
RSA1	YPL193W	MRP4	P32902	394 aa		2.53	□□□□□ -2
RSA1	YPL193W	MUM2	P38236	366 aa		2.53	□□□□□ -2
RSA1	YPL193W	DIA4	P38705	446 aa	Predicted RBP	2.53	□□□□□ -2
RSA1	YPL193W	YMR147W	P40218	223 aa	Known RBP	2.53	□□□□□ -2
RSA1	YPL193W	BUD32	P53323	261 aa		2.53	□□□□□ -2
RSA1	YPL193W	CWC22	P53333	577 aa	Known RBP	2.53	□□□□□ -2
RSA1	YPL193W	ARC35	P53731	342 aa	Known RBP	2.53	□□□□□ -2
RSA1	YPL193W	SXM1	Q04175	944 aa	Known RBP	2.53	□□□□□ -2
RSA1	YPL193W	YDL144C	Q07589	356 aa		2.53	□□□□□ -2
RSA1	YPL193W	TEN1	Q07921	160 aa		2.53	□□□□□ -2
RSA1	YPL193W	SDH5	Q08230	162 aa		2.53	□□□□□ -2
RSA1	YPL193W	RBD2	Q12270	262 aa		2.53	□□□□□ -2
RSA1	YPL193W	CDC31	P06704	161 aa	Known RBP	2.52	□□□□□ -2.01
RSA1	YPL193W	MTF2	P10849	440 aa		2.52	□□□□□ -2.01
RSA1	YPL193W	RNA14	P25298	677 aa	Known RBP	2.52	□□□□□ -2.01
RSA1	YPL193W	MTR2	P34232	184 aa	Known RBP	2.52	□□□□□ -2.01
RSA1	YPL193W	HAT2	P39984	401 aa		2.52	□□□□□ -2.01
RSA1	YPL193W	SHR3	Q02774	210 aa		2.52	□□□□□ -2.01
RSA1	YPL193W	RNY1	Q02933	434 aa	Known RBP	2.52	□□□□□ -2.01
RSA1	YPL193W	MUB1	Q03162	620 aa		2.52	□□□□□ -2.01
RSA1	YPL193W	PSR1	Q07800	427 aa		2.52	□□□□□ -2.01
RSA1	YPL193W	ERV2	Q12284	196 aa		2.52	□□□□□ -2.01
RSA1	YPL193W	RAD61	Q99359	647 aa		2.52	□□□□□ -2.01
RSA1	YPL193W	ADH2	P00331	348 aa	Known RBP	2.51	□□□□□ -2.01
RSA1	YPL193W	HSP82	P02829	709 aa	Known RBP	2.51	□□□□□ -2.01
RSA1	YPL193W	SNF1	P06782	633 aa	Known RBP	2.51	□□□□□ -2.01
RSA1	YPL193W	RPS19A	P07280	144 aa	Known RBP	2.51	□□□□□ -2.01
RSA1	YPL193W	RPS19B	P07281	144 aa	Predicted RBP	2.51	□□□□□ -2.01
RSA1	YPL193W	COQ1	P18900	473 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	VMA16	P23968	213 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	PUP3	P25451	205 aa	Known RBP	2.51	□□□□□ -2.01
RSA1	YPL193W	ADK2	P26364	225 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	SAS3	P34218	831 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	PEX5	P35056	612 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	DRE2	P36152	348 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	YFL067W	P43537	175 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	PTR3	P43606	678 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	DIA3	P52290	468 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	RCF1	Q03713	159 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	MFB1	Q04922	465 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	MMR1	Q06324	491 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	MRPL35	Q06678	367 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	OPY2	Q06810	360 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	RRD2	Q12461	358 aa		2.51	□□□□□ -2.01
RSA1	YPL193W	DAL5	P15365	543 aa		2.5	□□□□□ -2.01
RSA1	YPL193W	SUI2	P20459	304 aa	Known RBP	2.5	□□□□□ -2.01
RSA1	YPL193W	IMP2'	P32351	346 aa		2.5	□□□□□ -2.01
RSA1	YPL193W	UTH1	P36135	365 aa		2.5	□□□□□ -2.01
RSA1	YPL193W	TMA108	P40462	946 aa		2.5	□□□□□ -2.01
RSA1	YPL193W	MOB1	P40484	314 aa		2.5	□□□□□ -2.01
RSA1	YPL193W	PIB2	P53191	635 aa		2.5	□□□□□ -2.01
RSA1	YPL193W	BNA5	Q05979	453 aa		2.5	□□□□□ -2.01
RSA1	YPL193W	MRD1	Q06106	887 aa	Known RBP	2.5	□□□□□ -2.01
RSA1	YPL193W	VIP1	Q06685	1146 aa	Known RBP	2.5	□□□□□ -2.01
RSA1	YPL193W	LEU9	Q12166	604 aa	Known RBP	2.5	□□□□□ -2.01
RSA1	YPL193W	PEP5	P12868	1029 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	VPS45	P38932	577 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	SAP185	P40856	1058 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	VTC2	P43585	828 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	FMS1	P50264	508 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	LIF1	P53150	421 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	YGR127W	P53275	312 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	IRC15	Q02733	499 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	YML131W	Q03102	365 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	RRN11	Q04712	507 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	TCO89	Q08921	799 aa		2.49	□□□□□ -2.01
RSA1	YPL193W	ADH7	P25377	361 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	SLC1	P33333	303 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	PXA2	P34230	853 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	COY1	P34237	679 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	YKL100C	P34248	587 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	YNG2	P38806	282 aa	Known RBP	2.48	□□□□□ -2.01
RSA1	YPL193W	APE4	P38821	490 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	KAP123	P40069	1113 aa	Known RBP	2.48	□□□□□ -2.01
RSA1	YPL193W	NDE1	P40215	560 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	ALT2	P52892	507 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	RCO1	Q04779	684 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	MED1	Q12321	566 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	YOL087C	Q99247	1116 aa		2.48	□□□□□ -2.01
RSA1	YPL193W	MSB2	P32334	1306 aa		2.47	□□□□□ -2.01
RSA1	YPL193W	TY1B-A	O13527	1196 aa	Known RBP	2.47	□□□□□ -2.01
RSA1	YPL193W	RVS161	P25343	265 aa	Known RBP	2.47	□□□□□ -2.01
RSA1	YPL193W	SGF29	P25554	259 aa		2.47	□□□□□ -2.01
RSA1	YPL193W	KRR1	P25586	316 aa	Predicted RBP	2.47	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms