RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W YNR048WP53740 393 aa1.07□□□□□ -2.24
SGF11YPL047W SGT1Q08446 395 aa1.07□□□□□ -2.24
SGF11YPL047W TIM18Q08749 192 aa1.07□□□□□ -2.24
SGF11YPL047W RCN2Q12044 265 aa1.07□□□□□ -2.24
SGF11YPL047W HUA2Q12134 243 aa1.07□□□□□ -2.24
SGF11YPL047W PRM7Q12459 698 aa1.07□□□□□ -2.24
SGF11YPL047W SEC53P07283 254 aaKnown RBP1.06□□□□□ -2.24
SGF11YPL047W POP5P28005 173 aa1.06□□□□□ -2.24
SGF11YPL047W ECM25P32525 599 aa1.06□□□□□ -2.24
SGF11YPL047W NPL6P32832 435 aa1.06□□□□□ -2.24
SGF11YPL047W REC114P32841 428 aa1.06□□□□□ -2.24
SGF11YPL047W YCR041WP37265 110 aa1.06□□□□□ -2.24
SGF11YPL047W YBR137WP38276 179 aa1.06□□□□□ -2.24
SGF11YPL047W CCT2P39076 527 aaKnown RBP1.06□□□□□ -2.24
SGF11YPL047W TIM17P39515 158 aa1.06□□□□□ -2.24
SGF11YPL047W POP1P41812 875 aa1.06□□□□□ -2.24
SGF11YPL047W TFG2P41896 400 aaPredicted RBP1.06□□□□□ -2.24
SGF11YPL047W SSU1P41930 458 aa1.06□□□□□ -2.24
SGF11YPL047W YIP1P53039 248 aa1.06□□□□□ -2.24
SGF11YPL047W YGL108CP53139 140 aa1.06□□□□□ -2.24
SGF11YPL047W LCL3P53153 274 aa1.06□□□□□ -2.24
SGF11YPL047W AIM32Q04689 311 aa1.06□□□□□ -2.24
SGF11YPL047W RFM1Q12192 310 aa1.06□□□□□ -2.24
SGF11YPL047W RTP1Q12751 981 aa1.06□□□□□ -2.24
SGF11YPL047W PSK1P31374 1356 aa1.06□□□□□ -2.24
SGF11YPL047W HIS4P00815 799 aaKnown RBP1.05□□□□□ -2.24
SGF11YPL047W TRP1P00912 224 aa1.05□□□□□ -2.24
SGF11YPL047W CYC3P06182 269 aa1.05□□□□□ -2.24
SGF11YPL047W ATP10P18496 279 aa1.05□□□□□ -2.24
SGF11YPL047W OLE1P21147 510 aaKnown RBP1.05□□□□□ -2.24
SGF11YPL047W DPB3P27344 201 aa1.05□□□□□ -2.24
SGF11YPL047W ITR1P30605 584 aa1.05□□□□□ -2.24
SGF11YPL047W MUD1P32605 298 aaKnown RBP1.05□□□□□ -2.24
SGF11YPL047W AIM10P39965 576 aaKnown RBP1.05□□□□□ -2.24
SGF11YPL047W NOP16P40007 231 aaKnown RBP1.05□□□□□ -2.24
SGF11YPL047W DFG10P40526 253 aa1.05□□□□□ -2.24
SGF11YPL047W SGN1P40561 250 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
SGF11YPL047W LYS14P40971 790 aa1.05□□□□□ -2.24
SGF11YPL047W VMA13P41807 478 aaKnown RBP1.05□□□□□ -2.24
SGF11YPL047W VTC2P43585 828 aa1.05□□□□□ -2.24
SGF11YPL047W ECM27P47144 725 aa1.05□□□□□ -2.24
SGF11YPL047W TWF1P53250 332 aa1.05□□□□□ -2.24
SGF11YPL047W CAF130P53280 1122 aaPredicted RBP1.05□□□□□ -2.24
SGF11YPL047W ARE2P53629 642 aaKnown RBP1.05□□□□□ -2.24
SGF11YPL047W GIR2Q03768 265 aaPredicted RBP1.05□□□□□ -2.24
SGF11YPL047W YDR239CQ03780 787 aa1.05□□□□□ -2.24
SGF11YPL047W PPM1Q04081 328 aa1.05□□□□□ -2.24
SGF11YPL047W JID1Q12350 301 aa1.05□□□□□ -2.24
SGF11YPL047W ARG4P04076 463 aaPredicted RBP1.04□□□□□ -2.24
SGF11YPL047W GAL80P04387 435 aa1.04□□□□□ -2.24
SGF11YPL047W CBS1P14066 229 aa1.04□□□□□ -2.24
SGF11YPL047W RPB5P20434 215 aa1.04□□□□□ -2.24
SGF11YPL047W PRP21P32524 280 aaPredicted RBP1.04□□□□□ -2.24
SGF11YPL047W THI2P38141 450 aa1.04□□□□□ -2.24
SGF11YPL047W FUI1P38196 639 aa1.04□□□□□ -2.24
SGF11YPL047W PET130P47065 347 aa1.04□□□□□ -2.24
SGF11YPL047W RMD9P53140 646 aaKnown RBP1.04□□□□□ -2.24
SGF11YPL047W MKC7P53379 596 aa1.04□□□□□ -2.24
SGF11YPL047W YMR018WQ04364 514 aa1.04□□□□□ -2.24
SGF11YPL047W HSP31Q04432 237 aa1.04□□□□□ -2.24
SGF11YPL047W NDE2Q07500 545 aa1.04□□□□□ -2.24
SGF11YPL047W YPR022CQ12139 1133 aa1.04□□□□□ -2.24
SGF11YPL047W SNU66Q12420 587 aaPredicted RBP1.04□□□□□ -2.24
SGF11YPL047W FOB1O13329 566 aa1.03□□□□□ -2.24
SGF11YPL047W TEF1P02994 458 aaKnown RBP1.03□□□□□ -2.24
SGF11YPL047W TOP1P04786 769 aa1.03□□□□□ -2.24
SGF11YPL047W GPH1P06738 902 aaKnown RBP1.03□□□□□ -2.24
SGF11YPL047W SEC63P14906 663 aa1.03□□□□□ -2.24
SGF11YPL047W RAD14P28519 371 aa1.03□□□□□ -2.24
SGF11YPL047W PRR1P28708 518 aa1.03□□□□□ -2.24
SGF11YPL047W SSH4P32343 579 aa1.03□□□□□ -2.24
SGF11YPL047W MCM10P32354 571 aa1.03□□□□□ -2.24
SGF11YPL047W CSE2P33308 149 aa1.03□□□□□ -2.24
SGF11YPL047W NIP100P33420 868 aa1.03□□□□□ -2.24
SGF11YPL047W MUD2P36084 527 aaKnown RBP1.03□□□□□ -2.24
SGF11YPL047W CST26P38226 397 aa1.03□□□□□ -2.24
SGF11YPL047W REG2P38232 338 aa1.03□□□□□ -2.24
SGF11YPL047W LYS1P38998 373 aaRIP-Chip data1.03□□□□□ -2.24not detected
SGF11YPL047W PCF11P39081 626 aaPredicted RBP1.03□□□□□ -2.24
SGF11YPL047W JLP2P40206 208 aa1.03□□□□□ -2.24
SGF11YPL047W MDE1P47095 244 aa1.03□□□□□ -2.24
SGF11YPL047W UPF3P48412 387 aaKnown RBP1.03□□□□□ -2.24
SGF11YPL047W MRX6P48564 524 aa1.03□□□□□ -2.24
SGF11YPL047W FLC3P53121 802 aa1.03□□□□□ -2.24
SGF11YPL047W PCP1P53259 346 aa1.03□□□□□ -2.24
SGF11YPL047W DSL1P53847 754 aa1.03□□□□□ -2.24
SGF11YPL047W VPS75P53853 264 aa1.03□□□□□ -2.24
SGF11YPL047W CMS1Q07897 291 aaKnown RBP1.03□□□□□ -2.24
SGF11YPL047W SKI7Q08491 747 aaPredicted RBP1.03□□□□□ -2.24
SGF11YPL047W SNX3Q08826 162 aaKnown RBP1.03□□□□□ -2.24
SGF11YPL047W ORT1Q12375 292 aa1.03□□□□□ -2.24
SGF11YPL047W RMD5Q12508 421 aa1.03□□□□□ -2.24
SGF11YPL047W CBP6P07253 162 aaPredicted RBP1.02□□□□□ -2.25
SGF11YPL047W RIP1P08067 215 aa1.02□□□□□ -2.25
SGF11YPL047W SPS4P09937 338 aa1.02□□□□□ -2.25
SGF11YPL047W SLY1P22213 666 aa1.02□□□□□ -2.25
SGF11YPL047W CTR86P25355 563 aa1.02□□□□□ -2.25
SGF11YPL047W SNT1P25357 1226 aa1.02□□□□□ -2.25
SGF11YPL047W OCA4P25366 362 aa1.02□□□□□ -2.25
SGF11YPL047W SPB1P25582 841 aaPredicted RBP1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms