RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C SGN1P40561 250 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
LCB4YOR171C DSN1P40568 576 aa3.13□□□□□ -1.91
LCB4YOR171C ERG10P41338 398 aaKnown RBP3.13□□□□□ -1.91
LCB4YOR171C RPA34P47006 233 aaPredicted RBP3.13□□□□□ -1.91
LCB4YOR171C APS3P47064 194 aa3.13□□□□□ -1.91
LCB4YOR171C IBA57P47158 497 aa3.13□□□□□ -1.91
LCB4YOR171C AAD10P47182 288 aa3.13□□□□□ -1.91
LCB4YOR171C TAM41P53230 385 aa3.13□□□□□ -1.91
LCB4YOR171C YGR066CP53242 292 aa3.13□□□□□ -1.91
LCB4YOR171C PXR1P53335 271 aaPredicted RBP3.13□□□□□ -1.91
LCB4YOR171C CUS2P53830 285 aaPredicted RBP3.13□□□□□ -1.91
LCB4YOR171C MRS2Q01926 470 aa3.13□□□□□ -1.91
LCB4YOR171C ENT5Q03769 411 aaKnown RBP3.13□□□□□ -1.91
LCB4YOR171C CTS2Q06350 511 aa3.13□□□□□ -1.91
LCB4YOR171C YEH1Q07804 573 aa3.13□□□□□ -1.91
LCB4YOR171C SIL1Q08199 421 aa3.13□□□□□ -1.91
LCB4YOR171C BSC6Q08280 497 aa3.13□□□□□ -1.91
LCB4YOR171C NRT1Q08485 598 aa3.13□□□□□ -1.91
LCB4YOR171C SUL2Q12325 893 aa3.13□□□□□ -1.91
LCB4YOR171C NCB2Q92317 146 aa3.13□□□□□ -1.91
LCB4YOR171C PAB1P04147 577 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
LCB4YOR171C AAC1P04710 309 aa3.12□□□□□ -1.91
LCB4YOR171C TY2A-LR1P0C2J4 438 aa3.12□□□□□ -1.91
LCB4YOR171C TY2A-FP0CX61 438 aa3.12□□□□□ -1.91
LCB4YOR171C TY2A-GR2P0CX62 438 aa3.12□□□□□ -1.91
LCB4YOR171C RPL35AP0CX84 120 aaKnown RBP3.12□□□□□ -1.91
LCB4YOR171C RPL35BP0CX85 120 aaKnown RBP3.12□□□□□ -1.91
LCB4YOR171C WHI2P12611 486 aa3.12□□□□□ -1.91
LCB4YOR171C AMD2P22580 549 aa3.12□□□□□ -1.91
LCB4YOR171C GIT1P25346 518 aa3.12□□□□□ -1.91
LCB4YOR171C YCP4P25349 247 aaKnown RBP3.12□□□□□ -1.91
LCB4YOR171C TY2A-CP25383 438 aa3.12□□□□□ -1.91
LCB4YOR171C MEI4P29467 408 aa3.12□□□□□ -1.91
LCB4YOR171C SIN4P32259 974 aa3.12□□□□□ -1.91
LCB4YOR171C CSE1P33307 960 aa3.12□□□□□ -1.91
LCB4YOR171C AUR1P36107 401 aaPredicted RBP3.12□□□□□ -1.91
LCB4YOR171C SLM4P38247 162 aa3.12□□□□□ -1.91
LCB4YOR171C OSH3P38713 996 aaKnown RBP3.12□□□□□ -1.91
LCB4YOR171C VMA22P38784 181 aa3.12□□□□□ -1.91
LCB4YOR171C SEC72P39742 193 aaKnown RBP3.12□□□□□ -1.91
LCB4YOR171C SER3P40054 469 aa3.12□□□□□ -1.91
LCB4YOR171C PHB1P40961 287 aa3.12□□□□□ -1.91
LCB4YOR171C NMD5P46970 1048 aa3.12□□□□□ -1.91
LCB4YOR171C ECM27P47144 725 aa3.12□□□□□ -1.91
LCB4YOR171C VMA10P48836 114 aaKnown RBP3.12□□□□□ -1.91
LCB4YOR171C LIF1P53150 421 aa3.12□□□□□ -1.91
LCB4YOR171C VAC7P53950 1165 aa3.12□□□□□ -1.91
LCB4YOR171C UTP6Q02354 440 aaKnown RBP3.12□□□□□ -1.91
LCB4YOR171C TY2A-DR2Q03483 438 aa3.12□□□□□ -1.91
LCB4YOR171C SMA2Q04658 369 aa3.12□□□□□ -1.91
LCB4YOR171C ECM30Q06673 1274 aa3.12□□□□□ -1.91
LCB4YOR171C YFH1Q07540 174 aa3.12□□□□□ -1.91
LCB4YOR171C REX4Q08237 289 aa3.12□□□□□ -1.91
LCB4YOR171C RDR1Q08904 546 aa3.12□□□□□ -1.91
LCB4YOR171C TY2A-BQ12260 438 aa3.12□□□□□ -1.91
LCB4YOR171C TY2A-OR2Q12293 438 aa3.12□□□□□ -1.91
LCB4YOR171C TY2A-DR1Q12392 438 aa3.12□□□□□ -1.91
LCB4YOR171C TY2A-OR1Q12439 438 aa3.12□□□□□ -1.91
LCB4YOR171C SPE4Q12455 300 aa3.12□□□□□ -1.91
LCB4YOR171C SFG1Q12507 346 aa3.12□□□□□ -1.91
LCB4YOR171C LSO2Q3E772 92 aaKnown RBP3.12□□□□□ -1.91
LCB4YOR171C TY2A-DR3Q99303 438 aa3.12□□□□□ -1.91
LCB4YOR171C Q0010Q9ZZX9 128 aa3.12□□□□□ -1.91
LCB4YOR171C RPL24AP04449 155 aaKnown RBP3.11□□□□□ -1.91
LCB4YOR171C ILV5P06168 395 aaKnown RBP3.11□□□□□ -1.91
LCB4YOR171C MSF1P08425 469 aa3.11□□□□□ -1.91
LCB4YOR171C COQ1P18900 473 aa3.11□□□□□ -1.91
LCB4YOR171C ISY1P21374 235 aaPredicted RBP3.11□□□□□ -1.91
LCB4YOR171C VPS1P21576 704 aaKnown RBP3.11□□□□□ -1.91
LCB4YOR171C ERG8P24521 451 aa3.11□□□□□ -1.91
LCB4YOR171C ZUO1P32527 433 aaKnown RBP3.11□□□□□ -1.91
LCB4YOR171C CMC1P36064 111 aa3.11□□□□□ -1.91
LCB4YOR171C ALY1P36117 915 aa3.11□□□□□ -1.91
LCB4YOR171C BMT2P38278 337 aa3.11□□□□□ -1.91
LCB4YOR171C RCY1P39531 840 aa3.11□□□□□ -1.91
LCB4YOR171C GIM4P40005 111 aaKnown RBP3.11□□□□□ -1.91
LCB4YOR171C RFC4P40339 323 aaKnown RBP3.11□□□□□ -1.91
LCB4YOR171C FMS1P50264 508 aa3.11□□□□□ -1.91
LCB4YOR171C DIA3P52290 468 aa3.11□□□□□ -1.91
LCB4YOR171C YGL114WP53134 725 aa3.11□□□□□ -1.91
LCB4YOR171C ZPR1P53303 486 aaKnown RBP3.11□□□□□ -1.91
LCB4YOR171C RPT4P53549 437 aaKnown RBP3.11□□□□□ -1.91
LCB4YOR171C MRP51Q02950 344 aa3.11□□□□□ -1.91
LCB4YOR171C DCR2Q05924 578 aa3.11□□□□□ -1.91
LCB4YOR171C THI7Q05998 598 aa3.11□□□□□ -1.91
LCB4YOR171C STE23Q06010 1027 aa3.11□□□□□ -1.91
LCB4YOR171C CDD1Q06549 142 aa3.11□□□□□ -1.91
LCB4YOR171C VAM6Q07468 1049 aa3.11□□□□□ -1.91
LCB4YOR171C YDL114WQ07530 308 aa3.11□□□□□ -1.91
LCB4YOR171C GPN2Q08726 347 aaPredicted RBP3.11□□□□□ -1.91
LCB4YOR171C BUD7Q08754 746 aa3.11□□□□□ -1.91
LCB4YOR171C INP53Q12271 1107 aa3.11□□□□□ -1.91
LCB4YOR171C ATG31Q12421 196 aa3.11□□□□□ -1.91
LCB4YOR171C RRP12Q12754 1228 aaKnown RBP3.11□□□□□ -1.91
LCB4YOR171C YPT6Q99260 215 aa3.11□□□□□ -1.91
LCB4YOR171C RPL7AP05737 244 aaKnown RBP3.11□□□□□ -1.91
LCB4YOR171C HIP1P06775 603 aa3.11□□□□□ -1.91
LCB4YOR171C GAL3P13045 520 aa3.11□□□□□ -1.91
LCB4YOR171C SAG1P20840 650 aa3.11□□□□□ -1.91
LCB4YOR171C SAT4P25333 603 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms