RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W YGL108CP53139 140 aa3.69□□□□□ -1.82
ROD1YOR018W PRP38Q00723 242 aaPredicted RBP3.69□□□□□ -1.82
ROD1YOR018W HPF1Q05164 967 aa3.69□□□□□ -1.82
ROD1YOR018W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
ROD1YOR018W YOL019WQ08157 551 aa3.69□□□□□ -1.82
ROD1YOR018W SEN1Q00416 2231 aaKnown RBP3.69□□□□□ -1.82
ROD1YOR018W ATP6P00854 259 aa3.69□□□□□ -1.82
ROD1YOR018W INH1P01097 85 aa3.69□□□□□ -1.82
ROD1YOR018W RPS21AP0C0V8 87 aaKnown RBP3.69□□□□□ -1.82
ROD1YOR018W HOM2P13663 365 aaKnown RBP3.69□□□□□ -1.82
ROD1YOR018W NAR1P23503 491 aaKnown RBP3.69□□□□□ -1.82
ROD1YOR018W FPS1P23900 669 aa3.69□□□□□ -1.82
ROD1YOR018W SEC17P32602 292 aa3.69□□□□□ -1.82
ROD1YOR018W UGP1P32861 499 aaKnown RBP3.69□□□□□ -1.82
ROD1YOR018W CAF4P36130 643 aa3.69□□□□□ -1.82
ROD1YOR018W ROT2P38138 954 aa3.69□□□□□ -1.82
ROD1YOR018W FAD1P38913 306 aa3.69□□□□□ -1.82
ROD1YOR018W SWD1P39706 426 aa3.69□□□□□ -1.82
ROD1YOR018W LTP1P40347 161 aa3.69□□□□□ -1.82
ROD1YOR018W MIG2P53035 382 aa3.69□□□□□ -1.82
ROD1YOR018W RTS3P53289 263 aa3.69□□□□□ -1.82
ROD1YOR018W YPL113CQ02961 396 aa3.69□□□□□ -1.82
ROD1YOR018W YMR034CQ05131 434 aaPredicted RBP3.69□□□□□ -1.82
ROD1YOR018W BCP1Q06338 283 aa3.69□□□□□ -1.82
ROD1YOR018W SWA2Q06677 668 aa3.69□□□□□ -1.82
ROD1YOR018W PLB3Q08108 686 aa3.69□□□□□ -1.82
ROD1YOR018W YPR022CQ12139 1133 aa3.69□□□□□ -1.82
ROD1YOR018W RRP36Q12481 300 aaPredicted RBP3.69□□□□□ -1.82
ROD1YOR018W HSH49Q99181 213 aaPredicted RBP3.69□□□□□ -1.82
ROD1YOR018W SAS5Q99314 248 aa3.69□□□□□ -1.82
ROD1YOR018W HFA1P32874 2273 aa3.68□□□□□ -1.82
ROD1YOR018W YAK1P14680 807 aa3.68□□□□□ -1.82
ROD1YOR018W UGA1P17649 471 aa3.68□□□□□ -1.82
ROD1YOR018W HCM1P25364 564 aa3.68□□□□□ -1.82
ROD1YOR018W HBS1P32769 611 aaKnown RBP3.68□□□□□ -1.82
ROD1YOR018W COX13P32799 129 aa3.68□□□□□ -1.82
ROD1YOR018W IST2P38250 946 aa3.68□□□□□ -1.82
ROD1YOR018W BAT1P38891 393 aaKnown RBP3.68□□□□□ -1.82
ROD1YOR018W MBP1P39678 833 aa3.68□□□□□ -1.82
ROD1YOR018W MTW1P39731 289 aa3.68□□□□□ -1.82
ROD1YOR018W RGI1P40043 161 aaPredicted RBP3.68□□□□□ -1.82
ROD1YOR018W CAB2P40506 365 aa3.68□□□□□ -1.82
ROD1YOR018W YFL066CP43538 392 aa3.68□□□□□ -1.82
ROD1YOR018W BIR1P47134 954 aa3.68□□□□□ -1.82
ROD1YOR018W SUN4P53616 420 aa3.68□□□□□ -1.82
ROD1YOR018W CAF120P53836 1060 aa3.68□□□□□ -1.82
ROD1YOR018W YNL260CP53846 198 aa3.68□□□□□ -1.82
ROD1YOR018W ASI2P53895 289 aa3.68□□□□□ -1.82
ROD1YOR018W YNL058CP53947 316 aa3.68□□□□□ -1.82
ROD1YOR018W YNL033WP53964 284 aa3.68□□□□□ -1.82
ROD1YOR018W YNL019CP53975 284 aa3.68□□□□□ -1.82
ROD1YOR018W SKI8Q02793 397 aaPredicted RBP3.68□□□□□ -1.82
ROD1YOR018W HSP31Q04432 237 aa3.68□□□□□ -1.82
ROD1YOR018W RRP45Q05636 305 aaKnown RBP3.68□□□□□ -1.82
ROD1YOR018W YDL176WQ12027 708 aa3.68□□□□□ -1.82
ROD1YOR018W RKM5Q12367 367 aa3.68□□□□□ -1.82
ROD1YOR018W RPP1AP05318 106 aaPredicted RBP3.68□□□□□ -1.82
ROD1YOR018W SNF5P18480 905 aa3.68□□□□□ -1.82
ROD1YOR018W GBP2P25555 427 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
ROD1YOR018W SYP1P25623 870 aaKnown RBP3.68□□□□□ -1.82
ROD1YOR018W LYS1P38998 373 aaRIP-Chip data3.68□□□□□ -1.82not detected
ROD1YOR018W GTO1P48239 356 aa3.68□□□□□ -1.82
ROD1YOR018W MDM34P53083 459 aa3.68□□□□□ -1.82
ROD1YOR018W MPS2P53159 387 aa3.68□□□□□ -1.82
ROD1YOR018W ART5P53244 586 aaKnown RBP3.68□□□□□ -1.82
ROD1YOR018W ARE2P53629 642 aaKnown RBP3.68□□□□□ -1.82
ROD1YOR018W ARC35P53731 342 aaKnown RBP3.68□□□□□ -1.82
ROD1YOR018W YMR265CQ03508 461 aaKnown RBP3.68□□□□□ -1.82
ROD1YOR018W CLU1Q03690 1277 aaKnown RBP3.68□□□□□ -1.82
ROD1YOR018W YML096WQ04489 525 aa3.68□□□□□ -1.82
ROD1YOR018W BCH1Q05029 724 aa3.68□□□□□ -1.82
ROD1YOR018W MCH5Q08777 521 aa3.68□□□□□ -1.82
ROD1YOR018W TPK2P06245 380 aa3.67□□□□□ -1.82
ROD1YOR018W PHO84P25297 587 aaKnown RBP3.67□□□□□ -1.82
ROD1YOR018W PET309P32522 965 aaPredicted RBP3.67□□□□□ -1.82
ROD1YOR018W TFB1P32776 642 aa3.67□□□□□ -1.82
ROD1YOR018W AST1P35183 429 aa3.67□□□□□ -1.82
ROD1YOR018W SLM4P38247 162 aa3.67□□□□□ -1.82
ROD1YOR018W ERV46P39727 415 aa3.67□□□□□ -1.82
ROD1YOR018W JEM1P40358 645 aa3.67□□□□□ -1.82
ROD1YOR018W APQ12P40532 138 aa3.67□□□□□ -1.82
ROD1YOR018W IMA1P53051 589 aa3.67□□□□□ -1.82
ROD1YOR018W ZRG17P53735 605 aa3.67□□□□□ -1.82
ROD1YOR018W SWS2P53937 143 aa3.67□□□□□ -1.82
ROD1YOR018W YML053CQ04978 212 aa3.67□□□□□ -1.82
ROD1YOR018W YLR346CQ06139 101 aa3.67□□□□□ -1.82
ROD1YOR018W ATG29Q12092 213 aa3.67□□□□□ -1.82
ROD1YOR018W GTT2Q12390 233 aa3.67□□□□□ -1.82
ROD1YOR018W YPR064WQ12492 139 aa3.67□□□□□ -1.82
ROD1YOR018W ADF1Q2V2Q1 113 aa3.67□□□□□ -1.82
ROD1YOR018W UNG1P12887 359 aa3.67□□□□□ -1.82
ROD1YOR018W MSS116P15424 664 aaKnown RBP3.67□□□□□ -1.82
ROD1YOR018W ERS1P17261 260 aa3.67□□□□□ -1.82
ROD1YOR018W KKQ8P36004 724 aa3.67□□□□□ -1.82
ROD1YOR018W YPT52P36018 234 aaKnown RBP3.67□□□□□ -1.82
ROD1YOR018W FRE2P36033 711 aa3.67□□□□□ -1.82
ROD1YOR018W APT2P36973 181 aa3.67□□□□□ -1.82
ROD1YOR018W TRM7P38238 310 aaKnown RBP3.67□□□□□ -1.82
ROD1YOR018W NDE1P40215 560 aa3.67□□□□□ -1.82
ROD1YOR018W IMA5P40884 581 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms