RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeast

Gene DDI3, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDI3	YNL335W	SHO1	P40073	367 aa		4.07	□□□□□ -1.76
DDI3	YNL335W	TFG2	P41896	400 aa	Predicted RBP	4.07	□□□□□ -1.76
DDI3	YNL335W	MEP2	P41948	499 aa		4.07	□□□□□ -1.76
DDI3	YNL335W	GWT1	P47026	490 aa		4.07	□□□□□ -1.76
DDI3	YNL335W	SCS3	P53012	380 aa		4.07	□□□□□ -1.76
DDI3	YNL335W	RMT2	Q03305	412 aa		4.07	□□□□□ -1.76
DDI3	YNL335W	ERP1	Q05359	219 aa	Known RBP	4.07	□□□□□ -1.76
DDI3	YNL335W	RPO21	P04050	1733 aa	Known RBP	4.07	□□□□□ -1.76
DDI3	YNL335W	TSC11	P40061	1430 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	RPL15A	P05748	204 aa	Known RBP	4.06	□□□□□ -1.76
DDI3	YNL335W	MTC4	P38335	694 aa	Known RBP	4.06	□□□□□ -1.76
DDI3	YNL335W	MDM31	P38880	579 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	ALG8	P40351	577 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	YGL260W	P53056	76 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	YGL138C	P53122	345 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	DSL1	P53847	754 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	YDR131C	Q03899	556 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	ERB1	Q04660	807 aa	Known RBP	4.06	□□□□□ -1.76
DDI3	YNL335W	ROY1	Q04847	553 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	DON1	Q05610	365 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	ISA2	Q12425	185 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	SET6	Q12529	373 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	AFI1	Q99222	893 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	DNF1	P32660	1571 aa		4.06	□□□□□ -1.76
DDI3	YNL335W	RPL20A	P0CX23	172 aa	Known RBP	4.05	□□□□□ -1.76
DDI3	YNL335W	RPL20B	P0CX24	172 aa	Predicted RBP	4.05	□□□□□ -1.76
DDI3	YNL335W	TFB1	P32776	642 aa		4.05	□□□□□ -1.76
DDI3	YNL335W	FRE2	P36033	711 aa		4.05	□□□□□ -1.76
DDI3	YNL335W	RPH1	P39956	796 aa		4.05	□□□□□ -1.76
DDI3	YNL335W	ISC1	P40015	477 aa	Known RBP	4.05	□□□□□ -1.76
DDI3	YNL335W	COS5	P47187	383 aa		4.05	□□□□□ -1.76
DDI3	YNL335W	OGG1	P53397	376 aa	Predicted RBP	4.05	□□□□□ -1.76
DDI3	YNL335W	BNI5	P53890	448 aa	Known RBP	4.05	□□□□□ -1.76
DDI3	YNL335W	HSP31	Q04432	237 aa		4.05	□□□□□ -1.76
DDI3	YNL335W	COS7	Q07788	383 aa		4.05	□□□□□ -1.76
DDI3	YNL335W	HSP42	Q12329	375 aa		4.05	□□□□□ -1.76
DDI3	YNL335W	RRD2	Q12461	358 aa		4.05	□□□□□ -1.76
DDI3	YNL335W	GCN2	P15442	1659 aa		4.05	□□□□□ -1.76
DDI3	YNL335W	IRC20	Q06554	1556 aa		4.05	□□□□□ -1.76
DDI3	YNL335W	YLR278C	Q05854	1341 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	RIP1	P08067	215 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	ATR1	P13090	542 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	YCR022C	P25620	114 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	PRP21	P32524	280 aa	Predicted RBP	4.04	□□□□□ -1.76
DDI3	YNL335W	PXA2	P34230	853 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	PMU1	P36069	295 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	FMP46	P36141	133 aa	Known RBP	4.04	□□□□□ -1.76
DDI3	YNL335W	DHH1	P39517	506 aa	Known RBP	4.04	□□□□□ -1.76
DDI3	YNL335W	HAT2	P39984	401 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	RPR2	P40571	144 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	YFR016C	P43597	1233 aa	Known RBP	4.04	□□□□□ -1.76
DDI3	YNL335W	SKO1	Q02100	647 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	PPT2	Q12036	173 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	AYT1	Q12226	474 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	ISN1	Q99312	450 aa		4.04	□□□□□ -1.76
DDI3	YNL335W	YAR066W	P0CX18	203 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	YHR214W	P0CX19	203 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	CLB1	P24868	471 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	SNT1	P25357	1226 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	YUR1	P26725	428 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	CRM1	P30822	1084 aa	Known RBP	4.03	□□□□□ -1.76
DDI3	YNL335W	ATS1	P31386	333 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	VMA8	P32610	256 aa	Known RBP	4.03	□□□□□ -1.76
DDI3	YNL335W	PIM1	P36775	1133 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	SRP72	P38688	640 aa	Known RBP	4.03	□□□□□ -1.76
DDI3	YNL335W	CCT2	P39076	527 aa	Known RBP	4.03	□□□□□ -1.76
DDI3	YNL335W	YJL213W	P40896	331 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	PNG1	Q02890	363 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	VAM3	Q12241	283 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	ERP4	Q12450	207 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	SMC6	Q12749	1114 aa		4.03	□□□□□ -1.76
DDI3	YNL335W	RPA190	P10964	1664 aa	Known RBP	4.03	□□□□□ -1.76
DDI3	YNL335W	RPI1	P23250	407 aa	Known RBP	4.02	□□□□□ -1.77
DDI3	YNL335W	YCR100C	P25606	316 aa		4.02	□□□□□ -1.77
DDI3	YNL335W	URA7	P28274	579 aa	Known RBP	4.02	□□□□□ -1.77
DDI3	YNL335W	NDI1	P32340	513 aa		4.02	□□□□□ -1.77
DDI3	YNL335W	APE2	P32454	952 aa	Known RBP	4.02	□□□□□ -1.77
DDI3	YNL335W	CAK1	P43568	368 aa	Predicted RBP	4.02	□□□□□ -1.77
DDI3	YNL335W	RPS0B	P46654	252 aa	Known RBP	4.02	□□□□□ -1.77
DDI3	YNL335W	PCP1	P53259	346 aa		4.02	□□□□□ -1.77
DDI3	YNL335W	KTR5	P53966	522 aa	Predicted RBP	4.02	□□□□□ -1.77
DDI3	YNL335W	YDR387C	Q04162	555 aa		4.02	□□□□□ -1.77
DDI3	YNL335W	VPS15	P22219	1454 aa		4.02	□□□□□ -1.77
DDI3	YNL335W	GDH1	P07262	454 aa	Known RBP	4.01	□□□□□ -1.77
DDI3	YNL335W	PUT3	P25502	979 aa	Predicted RBP	4.01	□□□□□ -1.77
DDI3	YNL335W	HIR2	P32480	875 aa		4.01	□□□□□ -1.77
DDI3	YNL335W	APE3	P37302	537 aa	Known RBP	4.01	□□□□□ -1.77
DDI3	YNL335W	MMS4	P38257	691 aa		4.01	□□□□□ -1.77
DDI3	YNL335W	YHR054C	P38780	354 aa		4.01	□□□□□ -1.77
DDI3	YNL335W	ZIM17	P42844	174 aa		4.01	□□□□□ -1.77
DDI3	YNL335W	ECM27	P47144	725 aa		4.01	□□□□□ -1.77
DDI3	YNL335W	YDL186W	P48568	277 aa		4.01	□□□□□ -1.77
DDI3	YNL335W	YIF1	P53845	314 aa	Known RBP	4.01	□□□□□ -1.77
DDI3	YNL335W	ODC1	Q03028	310 aa		4.01	□□□□□ -1.77
DDI3	YNL335W	GEA2	P39993	1459 aa	Known RBP	4	□□□□□ -1.77
DDI3	YNL335W	HIS4	P00815	799 aa	Known RBP	4	□□□□□ -1.77
DDI3	YNL335W	HEM2	P05373	342 aa		4	□□□□□ -1.77
DDI3	YNL335W	URA4	P20051	364 aa		4	□□□□□ -1.77
DDI3	YNL335W	MCK1	P21965	375 aa	Known RBP	4	□□□□□ -1.77
DDI3	YNL335W	KRE2	P27809	442 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms