RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene SWS2, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWS2YNL081C HSP31Q04432 237 aa2.64□□□□□ -1.99
SWS2YNL081C MRD1Q06106 887 aaKnown RBP2.64□□□□□ -1.99
SWS2YNL081C TIM18Q08749 192 aa2.64□□□□□ -1.99
SWS2YNL081C ADH2P00331 348 aaKnown RBP2.63□□□□□ -1.99
SWS2YNL081C HIS4P00815 799 aaKnown RBP2.63□□□□□ -1.99
SWS2YNL081C TOP1P04786 769 aa2.63□□□□□ -1.99
SWS2YNL081C TIP1P27654 210 aaPredicted RBP2.63□□□□□ -1.99
SWS2YNL081C SPR1P32603 445 aa2.63□□□□□ -1.99
SWS2YNL081C PRS1P32895 427 aaKnown RBP2.63□□□□□ -1.99
SWS2YNL081C MNS1P32906 549 aa2.63□□□□□ -1.99
SWS2YNL081C OTU2P38747 307 aaKnown RBP2.63□□□□□ -1.99
SWS2YNL081C PAN6P40459 309 aa2.63□□□□□ -1.99
SWS2YNL081C TFG2P41896 400 aaPredicted RBP2.63□□□□□ -1.99
SWS2YNL081C NCA3P46955 337 aa2.63□□□□□ -1.99
SWS2YNL081C SHY1P53266 389 aa2.63□□□□□ -1.99
SWS2YNL081C SVL3Q03088 825 aaKnown RBP2.63□□□□□ -1.99
SWS2YNL081C YMR181CQ03231 154 aa2.63□□□□□ -1.99
SWS2YNL081C YDR387CQ04162 555 aa2.63□□□□□ -1.99
SWS2YNL081C RQC1Q05468 723 aaKnown RBP2.63□□□□□ -1.99
SWS2YNL081C MRPL35Q06678 367 aa2.63□□□□□ -1.99
SWS2YNL081C WTM1Q12363 437 aaKnown RBP2.63□□□□□ -1.99
SWS2YNL081C CDC60P26637 1090 aaKnown RBP2.62□□□□□ -1.99
SWS2YNL081C ECM25P32525 599 aa2.62□□□□□ -1.99
SWS2YNL081C VTC2P43585 828 aa2.62□□□□□ -1.99
SWS2YNL081C ARG4P04076 463 aaPredicted RBP2.61□□□□□ -1.99
SWS2YNL081C ARG3P05150 338 aa2.61□□□□□ -1.99
SWS2YNL081C GPH1P06738 902 aaKnown RBP2.61□□□□□ -1.99
SWS2YNL081C MET8P15807 274 aa2.61□□□□□ -1.99
SWS2YNL081C APE2P32454 952 aaKnown RBP2.61□□□□□ -1.99
SWS2YNL081C PRP21P32524 280 aaPredicted RBP2.61□□□□□ -1.99
SWS2YNL081C MET18P40469 1032 aa2.61□□□□□ -1.99
SWS2YNL081C YIF1P53845 314 aaKnown RBP2.61□□□□□ -1.99
SWS2YNL081C CWC25P53854 179 aaKnown RBP2.61□□□□□ -1.99
SWS2YNL081C JJJ1P53863 590 aa2.61□□□□□ -1.99
SWS2YNL081C HXT11P54862 567 aa2.61□□□□□ -1.99
SWS2YNL081C RSN1Q03516 953 aa2.61□□□□□ -1.99
SWS2YNL081C PPM1Q04081 328 aa2.61□□□□□ -1.99
SWS2YNL081C REX4Q08237 289 aa2.61□□□□□ -1.99
SWS2YNL081C YPR022CQ12139 1133 aa2.61□□□□□ -1.99
SWS2YNL081C RBD2Q12270 262 aa2.61□□□□□ -1.99
SWS2YNL081C MRP7P12687 371 aa2.6□□□□□ -1.99
SWS2YNL081C NAT1P12945 854 aaKnown RBP2.6□□□□□ -1.99
SWS2YNL081C NIP100P33420 868 aa2.6□□□□□ -1.99
SWS2YNL081C VHC1P38329 1120 aa2.6□□□□□ -1.99
SWS2YNL081C LYS1P38998 373 aaRIP-Chip data2.6□□□□□ -1.99not detected
SWS2YNL081C ESL1P40456 1118 aa2.6□□□□□ -1.99
SWS2YNL081C TIS11P47977 285 aa2.6□□□□□ -1.99
SWS2YNL081C YNR048WP53740 393 aa2.6□□□□□ -1.99
SWS2YNL081C VTA1Q06263 330 aa2.6□□□□□ -1.99
SWS2YNL081C SGT1Q08446 395 aa2.6□□□□□ -1.99
SWS2YNL081C MED1Q12321 566 aa2.6□□□□□ -1.99
SWS2YNL081C RRD2Q12461 358 aa2.6□□□□□ -1.99
SWS2YNL081C TEF1P02994 458 aaKnown RBP2.59□□□□□ -1.99
SWS2YNL081C RPI1P23250 407 aaKnown RBP2.59□□□□□ -1.99
SWS2YNL081C GPI10P30777 616 aa2.59□□□□□ -1.99
SWS2YNL081C CCT2P39076 527 aaKnown RBP2.59□□□□□ -1.99
SWS2YNL081C FRE4P53746 719 aa2.59□□□□□ -1.99
SWS2YNL081C HSP42Q12329 375 aa2.59□□□□□ -1.99
SWS2YNL081C CLC1P17891 233 aa2.58□□□□□ -2
SWS2YNL081C SLY1P22213 666 aa2.58□□□□□ -2
SWS2YNL081C MUD1P32605 298 aaKnown RBP2.58□□□□□ -2
SWS2YNL081C YHR054CP38780 354 aa2.58□□□□□ -2
SWS2YNL081C FMS1P50264 508 aa2.58□□□□□ -2
SWS2YNL081C MTM1P53320 366 aa2.58□□□□□ -2
SWS2YNL081C IRC25Q07951 179 aa2.58□□□□□ -2
SWS2YNL081C SNX3Q08826 162 aaKnown RBP2.58□□□□□ -2
SWS2YNL081C RRI2Q12348 645 aa2.58□□□□□ -2
SWS2YNL081C SOD1P00445 154 aaKnown RBP2.57□□□□□ -2
SWS2YNL081C RIP1P08067 215 aa2.57□□□□□ -2
SWS2YNL081C HCS1P34243 683 aa2.57□□□□□ -2
SWS2YNL081C KKQ8P36004 724 aa2.57□□□□□ -2
SWS2YNL081C SMF1P38925 575 aa2.57□□□□□ -2
SWS2YNL081C YJR011CP47086 261 aaPredicted RBP2.57□□□□□ -2
SWS2YNL081C MNP1P53163 194 aaPredicted RBP2.57□□□□□ -2
SWS2YNL081C YDL121CQ07541 149 aa2.57□□□□□ -2
SWS2YNL081C NFT1P0CE68 1218 aa2.56□□□□□ -2
SWS2YNL081C RPS8AP0CX39 200 aaKnown RBP2.56□□□□□ -2
SWS2YNL081C RPS8BP0CX40 200 aaKnown RBP2.56□□□□□ -2
SWS2YNL081C CKA1P15790 372 aa2.56□□□□□ -2
SWS2YNL081C PPH22P23595 377 aa2.56□□□□□ -2
SWS2YNL081C SNT1P25357 1226 aa2.56□□□□□ -2
SWS2YNL081C LSB5P25369 354 aa2.56□□□□□ -2
SWS2YNL081C MSG5P38590 489 aa2.56□□□□□ -2
SWS2YNL081C SAS2P40963 338 aa2.56□□□□□ -2
SWS2YNL081C VMA13P41807 478 aaKnown RBP2.56□□□□□ -2
SWS2YNL081C HAL1Q01766 294 aa2.56□□□□□ -2
SWS2YNL081C BET5Q03630 159 aa2.56□□□□□ -2
SWS2YNL081C GRX6Q12438 231 aa2.56□□□□□ -2
SWS2YNL081C YLR278CQ05854 1341 aa2.56□□□□□ -2
SWS2YNL081C RPL3P14126 387 aaKnown RBP2.55□□□□□ -2
SWS2YNL081C SPO7P18410 259 aa2.55□□□□□ -2
SWS2YNL081C POP5P28005 173 aa2.55□□□□□ -2
SWS2YNL081C ITR1P30605 584 aa2.55□□□□□ -2
SWS2YNL081C PCF11P39081 626 aaPredicted RBP2.55□□□□□ -2
SWS2YNL081C HMS2P47175 358 aa2.55□□□□□ -2
SWS2YNL081C TIM10P87108 93 aa2.55□□□□□ -2
SWS2YNL081C SKI7Q08491 747 aaPredicted RBP2.55□□□□□ -2
SWS2YNL081C FDH1Q08911 376 aa2.55□□□□□ -2
SWS2YNL081C ORT1Q12375 292 aa2.55□□□□□ -2
SWS2YNL081C TRP1P00912 224 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms