RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C RLI1Q03195 608 aaKnown RBP2.1□□□□□ -2.07
SOK2YMR016C YLR352WQ06479 807 aa2.1□□□□□ -2.07
SOK2YMR016C POS5Q06892 414 aa2.1□□□□□ -2.07
SOK2YMR016C MLH2Q07980 695 aa2.1□□□□□ -2.07
SOK2YMR016C TYR1P20049 452 aa2.09□□□□□ -2.07
SOK2YMR016C EBP2P36049 427 aaKnown RBP2.09□□□□□ -2.07
SOK2YMR016C PHD1P36093 366 aa2.09□□□□□ -2.07
SOK2YMR016C ASC1P38011 319 aaKnown RBP2.09□□□□□ -2.07
SOK2YMR016C ROT2P38138 954 aa2.09□□□□□ -2.07
SOK2YMR016C SLM4P38247 162 aa2.09□□□□□ -2.07
SOK2YMR016C OSH3P38713 996 aaKnown RBP2.09□□□□□ -2.07
SOK2YMR016C NAS2P40555 220 aa2.09□□□□□ -2.07
SOK2YMR016C KAP120Q02932 1032 aa2.09□□□□□ -2.07
SOK2YMR016C CTL1Q03220 320 aaKnown RBP2.09□□□□□ -2.07
SOK2YMR016C YDR286CQ05530 114 aa2.09□□□□□ -2.07
SOK2YMR016C VTA1Q06263 330 aa2.09□□□□□ -2.07
SOK2YMR016C PAR32Q12515 295 aaKnown RBP2.09□□□□□ -2.07
SOK2YMR016C ILV5P06168 395 aaKnown RBP2.09□□□□□ -2.08
SOK2YMR016C CDC23P16522 626 aa2.09□□□□□ -2.08
SOK2YMR016C GLK1P17709 500 aaKnown RBP2.09□□□□□ -2.08
SOK2YMR016C SPE2P21182 396 aa2.09□□□□□ -2.08
SOK2YMR016C RNA14P25298 677 aaKnown RBP2.09□□□□□ -2.08
SOK2YMR016C POT1P27796 417 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
SOK2YMR016C MDL1P33310 695 aa2.09□□□□□ -2.08
SOK2YMR016C YPK3P38070 525 aa2.09□□□□□ -2.08
SOK2YMR016C RXT2P38255 430 aa2.09□□□□□ -2.08
SOK2YMR016C ERG7P38604 731 aa2.09□□□□□ -2.08
SOK2YMR016C LAG1P38703 411 aa2.09□□□□□ -2.08
SOK2YMR016C RPM2Q02773 1202 aa2.09□□□□□ -2.08
SOK2YMR016C SHR3Q02774 210 aa2.09□□□□□ -2.08
SOK2YMR016C DIG1Q03063 452 aaKnown RBP2.09□□□□□ -2.08
SOK2YMR016C YMR254CQ04838 102 aa2.09□□□□□ -2.08
SOK2YMR016C RPN5Q12250 445 aaKnown RBP2.09□□□□□ -2.08
SOK2YMR016C YSP2Q06681 1438 aa2.08□□□□□ -2.08
SOK2YMR016C TY1B-AO13527 1196 aaKnown RBP2.08□□□□□ -2.08
SOK2YMR016C RPL1AP0CX43 217 aaKnown RBP2.08□□□□□ -2.08
SOK2YMR016C RPL1BP0CX44 217 aaKnown RBP2.08□□□□□ -2.08
SOK2YMR016C BUB3P26449 341 aa2.08□□□□□ -2.08
SOK2YMR016C ACH1P32316 526 aa2.08□□□□□ -2.08
SOK2YMR016C HIR2P32480 875 aa2.08□□□□□ -2.08
SOK2YMR016C YKL023WP36103 277 aaKnown RBP2.08□□□□□ -2.08
SOK2YMR016C ARC40P38328 384 aaKnown RBP2.08□□□□□ -2.08
SOK2YMR016C OTU2P38747 307 aaKnown RBP2.08□□□□□ -2.08
SOK2YMR016C FAU1P40099 211 aa2.08□□□□□ -2.08
SOK2YMR016C CHS6P40955 746 aa2.08□□□□□ -2.08
SOK2YMR016C SAS2P40963 338 aa2.08□□□□□ -2.08
SOK2YMR016C TFG2P41896 400 aaPredicted RBP2.08□□□□□ -2.08
SOK2YMR016C SSU1P41930 458 aa2.08□□□□□ -2.08
SOK2YMR016C RRT5P43607 289 aa2.08□□□□□ -2.08
SOK2YMR016C COS5P47187 383 aa2.08□□□□□ -2.08
SOK2YMR016C SXM1Q04175 944 aaKnown RBP2.08□□□□□ -2.08
SOK2YMR016C YMR034CQ05131 434 aaPredicted RBP2.08□□□□□ -2.08
SOK2YMR016C COS7Q07788 383 aa2.08□□□□□ -2.08
SOK2YMR016C RDR1Q08904 546 aa2.08□□□□□ -2.08
SOK2YMR016C MDH1P17505 334 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
SOK2YMR016C MNE1P24720 663 aa2.08□□□□□ -2.08
SOK2YMR016C YCR043CP25361 127 aa2.08□□□□□ -2.08
SOK2YMR016C SNC1P31109 117 aa2.08□□□□□ -2.08
SOK2YMR016C AFG1P32317 509 aa2.08□□□□□ -2.08
SOK2YMR016C DBF4P32325 704 aa2.08□□□□□ -2.08
SOK2YMR016C SPC110P32380 944 aa2.08□□□□□ -2.08
SOK2YMR016C BLI1P35727 113 aa2.08□□□□□ -2.08
SOK2YMR016C SCO2P38072 301 aa2.08□□□□□ -2.08
SOK2YMR016C ADH5P38113 351 aaKnown RBP2.08□□□□□ -2.08
SOK2YMR016C STP2P38704 541 aa2.08□□□□□ -2.08
SOK2YMR016C ALK1P43633 760 aaKnown RBP2.08□□□□□ -2.08
SOK2YMR016C VPS25P47142 202 aa2.08□□□□□ -2.08
SOK2YMR016C YGR016WP53209 190 aa2.08□□□□□ -2.08
SOK2YMR016C OCA2P53949 197 aa2.08□□□□□ -2.08
SOK2YMR016C HOT1Q03213 719 aa2.08□□□□□ -2.08
SOK2YMR016C HEL2Q05580 639 aaKnown RBP2.08□□□□□ -2.08
SOK2YMR016C DON1Q05610 365 aa2.08□□□□□ -2.08
SOK2YMR016C MCP2Q06567 569 aa2.08□□□□□ -2.08
SOK2YMR016C SYO1Q07395 620 aa2.08□□□□□ -2.08
SOK2YMR016C NRT1Q08485 598 aa2.08□□□□□ -2.08
SOK2YMR016C VAM3Q12241 283 aa2.08□□□□□ -2.08
SOK2YMR016C RAV1P47104 1357 aa2.08□□□□□ -2.08
SOK2YMR016C FUN19P28003 413 aaPredicted RBP2.07□□□□□ -2.08
SOK2YMR016C MCM4P30665 933 aaKnown RBP2.07□□□□□ -2.08
SOK2YMR016C FRE1P32791 686 aa2.07□□□□□ -2.08
SOK2YMR016C SDS24P38314 527 aa2.07□□□□□ -2.08
SOK2YMR016C MLH1P38920 769 aa2.07□□□□□ -2.08
SOK2YMR016C DHH1P39517 506 aaKnown RBP2.07□□□□□ -2.08
SOK2YMR016C TES1P41903 349 aaKnown RBP2.07□□□□□ -2.08
SOK2YMR016C DUG3P53871 357 aa2.07□□□□□ -2.08
SOK2YMR016C SAM50P53969 484 aa2.07□□□□□ -2.08
SOK2YMR016C HCR1Q05775 265 aaKnown RBP2.07□□□□□ -2.08
SOK2YMR016C SSK1Q07084 712 aa2.07□□□□□ -2.08
SOK2YMR016C ISA2Q12425 185 aa2.07□□□□□ -2.08
SOK2YMR016C GEA1P47102 1408 aaPredicted RBP2.07□□□□□ -2.08
SOK2YMR016C HIP1P06775 603 aa2.07□□□□□ -2.08
SOK2YMR016C HNM1P19807 563 aa2.07□□□□□ -2.08
SOK2YMR016C RPB8P20436 146 aa2.07□□□□□ -2.08
SOK2YMR016C SWI3P32591 825 aa2.07□□□□□ -2.08
SOK2YMR016C SIP2P34164 415 aaKnown RBP2.07□□□□□ -2.08
SOK2YMR016C HCS1P34243 683 aa2.07□□□□□ -2.08
SOK2YMR016C YKL097CP34245 136 aa2.07□□□□□ -2.08
SOK2YMR016C ECM15P35195 104 aa2.07□□□□□ -2.08
SOK2YMR016C RPT4P53549 437 aaKnown RBP2.07□□□□□ -2.08
SOK2YMR016C YPL107WQ02873 248 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms