RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C KTR3P38130 404 aaPredicted RBP3.28□□□□□ -1.88
RPN13YLR421C DIA4P38705 446 aaPredicted RBP3.28□□□□□ -1.88
RPN13YLR421C OTU2P38747 307 aaKnown RBP3.28□□□□□ -1.88
RPN13YLR421C MEP1P40260 492 aa3.28□□□□□ -1.88
RPN13YLR421C AIM20P40451 204 aa3.28□□□□□ -1.88
RPN13YLR421C EFM4P40516 257 aa3.28□□□□□ -1.88
RPN13YLR421C LCB2P40970 561 aa3.28□□□□□ -1.88
RPN13YLR421C GCN20P43535 752 aaKnown RBP3.28□□□□□ -1.88
RPN13YLR421C DLD2P46681 530 aaKnown RBP3.28□□□□□ -1.88
RPN13YLR421C PET130P47065 347 aa3.28□□□□□ -1.88
RPN13YLR421C OCA1P50946 238 aaPredicted RBP3.28□□□□□ -1.88
RPN13YLR421C CUL3P53202 744 aa3.28□□□□□ -1.88
RPN13YLR421C ORM1P53224 222 aa3.28□□□□□ -1.88
RPN13YLR421C OGG1P53397 376 aaPredicted RBP3.28□□□□□ -1.88
RPN13YLR421C RPC11Q04307 110 aaPredicted RBP3.28□□□□□ -1.88
RPN13YLR421C CRN1Q06440 651 aa3.28□□□□□ -1.88
RPN13YLR421C ARR1Q06596 294 aa3.28□□□□□ -1.88
RPN13YLR421C LUC7Q07508 261 aaPredicted RBP3.28□□□□□ -1.88
RPN13YLR421C CUE5Q08412 411 aaKnown RBP3.28□□□□□ -1.88
RPN13YLR421C JIP3O13555 125 aa3.27□□□□□ -1.89
RPN13YLR421C TYR1P20049 452 aa3.27□□□□□ -1.89
RPN13YLR421C REC107P21651 314 aa3.27□□□□□ -1.89
RPN13YLR421C RAD57P25301 460 aa3.27□□□□□ -1.89
RPN13YLR421C ADH7P25377 361 aa3.27□□□□□ -1.89
RPN13YLR421C MGR1P25573 417 aa3.27□□□□□ -1.89
RPN13YLR421C TCD2P36101 447 aaKnown RBP3.27□□□□□ -1.89
RPN13YLR421C PIM1P36775 1133 aa3.27□□□□□ -1.89
RPN13YLR421C UIP3P39547 235 aa3.27□□□□□ -1.89
RPN13YLR421C GVP36P40531 326 aaKnown RBP3.27□□□□□ -1.89
RPN13YLR421C ZIM17P42844 174 aa3.27□□□□□ -1.89
RPN13YLR421C SHE10P53075 577 aa3.27□□□□□ -1.89
RPN13YLR421C LCL3P53153 274 aa3.27□□□□□ -1.89
RPN13YLR421C ART5P53244 586 aaKnown RBP3.27□□□□□ -1.89
RPN13YLR421C DCP2P53550 970 aaKnown RBP3.27□□□□□ -1.89
RPN13YLR421C IST1P53843 298 aaPredicted RBP3.27□□□□□ -1.89
RPN13YLR421C YNL247WP53852 767 aaKnown RBP3.27□□□□□ -1.89
RPN13YLR421C EFM6P53970 246 aa3.27□□□□□ -1.89
RPN13YLR421C ADE16P54113 591 aaKnown RBP3.27□□□□□ -1.89
RPN13YLR421C SMA1Q02651 245 aa3.27□□□□□ -1.89
RPN13YLR421C ROY1Q04847 553 aa3.27□□□□□ -1.89
RPN13YLR421C RSF1Q05043 376 aa3.27□□□□□ -1.89
RPN13YLR421C RBS1Q05672 457 aaKnown RBP3.27□□□□□ -1.89
RPN13YLR421C VTA1Q06263 330 aa3.27□□□□□ -1.89
RPN13YLR421C GGA1Q06336 557 aa3.27□□□□□ -1.89
RPN13YLR421C FMP45Q07651 309 aa3.27□□□□□ -1.89
RPN13YLR421C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
RPN13YLR421C FMP40Q08968 688 aaPredicted RBP3.27□□□□□ -1.89
RPN13YLR421C KEL3Q08979 651 aaPredicted RBP3.27□□□□□ -1.89
RPN13YLR421C SPE3Q12074 293 aaKnown RBP3.27□□□□□ -1.89
RPN13YLR421C YLR049CQ12110 428 aa3.27□□□□□ -1.89
RPN13YLR421C HSP42Q12329 375 aa3.27□□□□□ -1.89
RPN13YLR421C OCA6Q12454 224 aa3.27□□□□□ -1.89
RPN13YLR421C CDC8P00572 216 aa3.26□□□□□ -1.89
RPN13YLR421C MF(ALPHA)1P01149 165 aa3.26□□□□□ -1.89
RPN13YLR421C ARG4P04076 463 aaPredicted RBP3.26□□□□□ -1.89
RPN13YLR421C RPL22AP05749 121 aaKnown RBP3.26□□□□□ -1.89
RPN13YLR421C SPB1P25582 841 aaPredicted RBP3.26□□□□□ -1.89
RPN13YLR421C ERV1P27882 189 aa3.26□□□□□ -1.89
RPN13YLR421C SSE2P32590 693 aaKnown RBP3.26□□□□□ -1.89
RPN13YLR421C PMT1P33775 817 aa3.26□□□□□ -1.89
RPN13YLR421C SNU114P36048 1008 aaKnown RBP3.26□□□□□ -1.89
RPN13YLR421C ADE17P38009 592 aaKnown RBP3.26□□□□□ -1.89
RPN13YLR421C LEU5P38702 357 aa3.26□□□□□ -1.89
RPN13YLR421C SHQ1P40486 507 aaPredicted RBP3.26□□□□□ -1.89
RPN13YLR421C NAS2P40555 220 aa3.26□□□□□ -1.89
RPN13YLR421C CAK1P43568 368 aaPredicted RBP3.26□□□□□ -1.89
RPN13YLR421C YJL055WP47044 245 aa3.26□□□□□ -1.89
RPN13YLR421C MLC1P53141 149 aa3.26□□□□□ -1.89
RPN13YLR421C ZPR1P53303 486 aaKnown RBP3.26□□□□□ -1.89
RPN13YLR421C YNL181WP53878 407 aa3.26□□□□□ -1.89
RPN13YLR421C EOS1P53938 366 aa3.26□□□□□ -1.89
RPN13YLR421C ASI1P54074 624 aa3.26□□□□□ -1.89
RPN13YLR421C YPL107WQ02873 248 aa3.26□□□□□ -1.89
RPN13YLR421C KAP120Q02932 1032 aa3.26□□□□□ -1.89
RPN13YLR421C BUD22Q04347 519 aaKnown RBP3.26□□□□□ -1.89
RPN13YLR421C SPC24Q04477 213 aa3.26□□□□□ -1.89
RPN13YLR421C YLR455WQ06188 304 aa3.26□□□□□ -1.89
RPN13YLR421C MMR1Q06324 491 aa3.26□□□□□ -1.89
RPN13YLR421C TSR1Q07381 788 aaKnown RBP3.26□□□□□ -1.89
RPN13YLR421C GAL80P04387 435 aa3.25□□□□□ -1.89
RPN13YLR421C LPD1P09624 499 aaKnown RBP3.25□□□□□ -1.89
RPN13YLR421C YML002WP0CF17 737 aa3.25□□□□□ -1.89
RPN13YLR421C BAR1P12630 587 aa3.25□□□□□ -1.89
RPN13YLR421C CKI1P20485 582 aa3.25□□□□□ -1.89
RPN13YLR421C PUP3P25451 205 aaKnown RBP3.25□□□□□ -1.89
RPN13YLR421C RPC19P28000 142 aaKnown RBP3.25□□□□□ -1.89
RPN13YLR421C IDH2P28241 369 aaKnown RBP3.25□□□□□ -1.89
RPN13YLR421C HXT3P32466 567 aaKnown RBP3.25□□□□□ -1.89
RPN13YLR421C NIP1P32497 812 aaKnown RBP3.25□□□□□ -1.89
RPN13YLR421C RML2P32611 393 aa3.25□□□□□ -1.89
RPN13YLR421C YET1P35723 206 aa3.25□□□□□ -1.89
RPN13YLR421C APE3P37302 537 aaKnown RBP3.25□□□□□ -1.89
RPN13YLR421C HEK2P38199 381 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89 RIP-Chip
RPN13YLR421C DED81P38707 554 aaKnown RBP3.25□□□□□ -1.89
RPN13YLR421C TDA11P38854 504 aa3.25□□□□□ -1.89
RPN13YLR421C POP2P39008 433 aa3.25□□□□□ -1.89
RPN13YLR421C PKP1P40530 394 aa3.25□□□□□ -1.89
RPN13YLR421C INA22P40576 216 aa3.25□□□□□ -1.89
RPN13YLR421C HXT14P42833 540 aa3.25□□□□□ -1.89
RPN13YLR421C STB1P42845 420 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms