RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeast

Gene YPT6, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT6	YLR262C	UTP9	P38882	575 aa	Known RBP	3.16	□□□□□ -1.9
YPT6	YLR262C	LAM5	P43560	674 aa		3.16	□□□□□ -1.9
YPT6	YLR262C	TOF1	P53840	1238 aa		3.16	□□□□□ -1.9
YPT6	YLR262C	RPA49	Q01080	415 aa	Predicted RBP	3.16	□□□□□ -1.9
YPT6	YLR262C	MRP51	Q02950	344 aa		3.16	□□□□□ -1.9
YPT6	YLR262C	ERV2	Q12284	196 aa		3.16	□□□□□ -1.9
YPT6	YLR262C	RRP12	Q12754	1228 aa	Known RBP	3.16	□□□□□ -1.9
YPT6	YLR262C	HHF1	P02309	103 aa	Known RBP	3.15	□□□□□ -1.91
YPT6	YLR262C	CLN3	P13365	580 aa		3.15	□□□□□ -1.91
YPT6	YLR262C	ECM25	P32525	599 aa		3.15	□□□□□ -1.91
YPT6	YLR262C	VHC1	P38329	1120 aa		3.15	□□□□□ -1.91
YPT6	YLR262C	OTU2	P38747	307 aa	Known RBP	3.15	□□□□□ -1.91
YPT6	YLR262C	GPD2	P41911	440 aa	Known RBP	3.15	□□□□□ -1.91
YPT6	YLR262C	MDM1	Q01846	1127 aa		3.15	□□□□□ -1.91
YPT6	YLR262C	HSP31	Q04432	237 aa		3.15	□□□□□ -1.91
YPT6	YLR262C	ITR1	P30605	584 aa		3.14	□□□□□ -1.91
YPT6	YLR262C	ERG3	P32353	365 aa		3.14	□□□□□ -1.91
YPT6	YLR262C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
YPT6	YLR262C	SWD3	P38123	315 aa		3.14	□□□□□ -1.91
YPT6	YLR262C	RIB5	P38145	238 aa		3.14	□□□□□ -1.91
YPT6	YLR262C	PTH1	P38876	190 aa	Known RBP	3.14	□□□□□ -1.91
YPT6	YLR262C	FRE4	P53746	719 aa		3.14	□□□□□ -1.91
YPT6	YLR262C	IBD2	P53892	351 aa		3.14	□□□□□ -1.91
YPT6	YLR262C	SYF1	Q04048	859 aa	Predicted RBP	3.14	□□□□□ -1.91
YPT6	YLR262C	HEL2	Q05580	639 aa	Known RBP	3.14	□□□□□ -1.91
YPT6	YLR262C	MUM3	Q08750	479 aa		3.14	□□□□□ -1.91
YPT6	YLR262C	YLR108C	Q12259	485 aa		3.14	□□□□□ -1.91
YPT6	YLR262C	PGA3	Q12746	312 aa	Known RBP	3.14	□□□□□ -1.91
YPT6	YLR262C	TIP1	P27654	210 aa	Predicted RBP	3.13	□□□□□ -1.91
YPT6	YLR262C	YEL045C	P32616	141 aa		3.13	□□□□□ -1.91
YPT6	YLR262C	ARA1	P38115	344 aa		3.13	□□□□□ -1.91
YPT6	YLR262C	MIX23	P38162	196 aa		3.13	□□□□□ -1.91
YPT6	YLR262C	MST28	P39552	234 aa		3.13	□□□□□ -1.91
YPT6	YLR262C	SAS2	P40963	338 aa		3.13	□□□□□ -1.91
YPT6	YLR262C	DLD2	P46681	530 aa	Known RBP	3.13	□□□□□ -1.91
YPT6	YLR262C	RRN11	Q04712	507 aa		3.13	□□□□□ -1.91
YPT6	YLR262C	RIP1	P08067	215 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	SLY1	P22213	666 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	CLB3	P24870	427 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	GYP6	P32806	458 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	YHR054C	P38780	354 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	PRM5	P40476	318 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	YGR210C	P42942	411 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	ECM27	P47144	725 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	GIR2	Q03768	265 aa	Predicted RBP	3.12	□□□□□ -1.91
YPT6	YLR262C	ARX1	Q03862	593 aa	Known RBP	3.12	□□□□□ -1.91
YPT6	YLR262C	VTA1	Q06263	330 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	TMC1	Q08422	150 aa	Predicted RBP	3.12	□□□□□ -1.91
YPT6	YLR262C	TIM18	Q08749	192 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	PKH2	Q12236	1081 aa	Known RBP	3.12	□□□□□ -1.91
YPT6	YLR262C	YRF1-4	O13559	1382 aa		3.12	□□□□□ -1.91
YPT6	YLR262C	CDC31	P06704	161 aa	Known RBP	3.11	□□□□□ -1.91
YPT6	YLR262C	GPH1	P06738	902 aa	Known RBP	3.11	□□□□□ -1.91
YPT6	YLR262C	SEC63	P14906	663 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	BEM1	P29366	551 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	RML2	P32611	393 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	HCS1	P34243	683 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	STB6	P36085	766 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	PIM1	P36775	1133 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	YBR137W	P38276	179 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	PRE5	P40302	234 aa	Known RBP	3.11	□□□□□ -1.91
YPT6	YLR262C	PHB2	P50085	310 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	HXT11	P54862	567 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	YMR155W	Q03795	547 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	PPM1	Q04081	328 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	YLR287C	Q05881	355 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	HRT3	Q12347	344 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	RAD61	Q99359	647 aa		3.11	□□□□□ -1.91
YPT6	YLR262C	ADH2	P00331	348 aa	Known RBP	3.1	□□□□□ -1.91
YPT6	YLR262C	HIS4	P00815	799 aa	Known RBP	3.1	□□□□□ -1.91
YPT6	YLR262C	TRP1	P00912	224 aa		3.1	□□□□□ -1.91
YPT6	YLR262C	MTC6	P38849	526 aa		3.1	□□□□□ -1.91
YPT6	YLR262C	LYS1	P38998	373 aa	RIP-Chip data	3.1	□□□□□ -1.91	not detected
YPT6	YLR262C	RPS0B	P46654	252 aa	Known RBP	3.1	□□□□□ -1.91
YPT6	YLR262C	HMS2	P47175	358 aa		3.1	□□□□□ -1.91
YPT6	YLR262C	SSN8	P47821	323 aa		3.1	□□□□□ -1.91
YPT6	YLR262C	RRG7	Q08774	242 aa	Predicted RBP	3.1	□□□□□ -1.91
YPT6	YLR262C	SNX3	Q08826	162 aa	Known RBP	3.1	□□□□□ -1.91
YPT6	YLR262C	TEF1	P02994	458 aa	Known RBP	3.09	□□□□□ -1.91
YPT6	YLR262C	ILV5	P06168	395 aa	Known RBP	3.09	□□□□□ -1.91
YPT6	YLR262C	PET123	P17558	318 aa		3.09	□□□□□ -1.91
YPT6	YLR262C	RHB1	P25378	209 aa		3.09	□□□□□ -1.91
YPT6	YLR262C	CDC60	P26637	1090 aa	Known RBP	3.09	□□□□□ -1.91
YPT6	YLR262C	PAL1	Q05518	499 aa	Known RBP	3.09	□□□□□ -1.91
YPT6	YLR262C	MDM30	Q05930	598 aa		3.09	□□□□□ -1.91
YPT6	YLR262C	RRG1	Q12167	365 aa	Predicted RBP	3.09	□□□□□ -1.91
YPT6	YLR262C	VAM3	Q12241	283 aa		3.09	□□□□□ -1.91
YPT6	YLR262C	RTP1	Q12751	981 aa		3.09	□□□□□ -1.91
YPT6	YLR262C	RPS8A	P0CX39	200 aa	Known RBP	3.08	□□□□□ -1.92
YPT6	YLR262C	RPS8B	P0CX40	200 aa	Known RBP	3.08	□□□□□ -1.92
YPT6	YLR262C	SRV2	P17555	526 aa	Known RBP	3.08	□□□□□ -1.92
YPT6	YLR262C	FUR1	P18562	216 aa	Known RBP	3.08	□□□□□ -1.92
YPT6	YLR262C	ISY1	P21374	235 aa	Predicted RBP	3.08	□□□□□ -1.92
YPT6	YLR262C	SPS22	P25380	463 aa		3.08	□□□□□ -1.92
YPT6	YLR262C	ARO2	P28777	376 aa	Known RBP	3.08	□□□□□ -1.92
YPT6	YLR262C	SIN4	P32259	974 aa		3.08	□□□□□ -1.92
YPT6	YLR262C	SDH3	P33421	198 aa		3.08	□□□□□ -1.92
YPT6	YLR262C	MSG5	P38590	489 aa		3.08	□□□□□ -1.92
YPT6	YLR262C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
YPT6	YLR262C	REE1	P40893	198 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms