RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W HSP31Q04432 237 aa4.4□□□□□ -1.71
CBF5YLR175W DYN3Q04949 312 aa4.4□□□□□ -1.71
CBF5YLR175W EAF1Q06337 982 aa4.4□□□□□ -1.71
CBF5YLR175W BCP1Q06338 283 aa4.4□□□□□ -1.71
CBF5YLR175W SGT1Q08446 395 aa4.4□□□□□ -1.71
CBF5YLR175W RPN8Q08723 338 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W NMD4Q12129 218 aa4.4□□□□□ -1.71
CBF5YLR175W YPR011CQ12251 326 aa4.4□□□□□ -1.71
CBF5YLR175W JLP1Q12358 412 aa4.4□□□□□ -1.71
CBF5YLR175W TY4A-HQ6Q5P6 413 aa4.4□□□□□ -1.71
CBF5YLR175W SRN2Q99176 213 aa4.4□□□□□ -1.71
CBF5YLR175W HRP1Q99383 534 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W STT4P37297 1900 aa4.4□□□□□ -1.71
CBF5YLR175W TPK2P06245 380 aa4.39□□□□□ -1.71
CBF5YLR175W RPS4AP0CX35 261 aaKnown RBP4.39□□□□□ -1.71
CBF5YLR175W RPS4BP0CX36 261 aaKnown RBP4.39□□□□□ -1.71
CBF5YLR175W LAT1P12695 482 aaKnown RBP4.39□□□□□ -1.71
CBF5YLR175W TOP3P13099 656 aa4.39□□□□□ -1.71
CBF5YLR175W SAC7P17121 654 aa4.39□□□□□ -1.71
CBF5YLR175W SGV1P23293 657 aaKnown RBP4.39□□□□□ -1.71
CBF5YLR175W PPH21P23594 369 aa4.39□□□□□ -1.71
CBF5YLR175W SLM5P25345 492 aaKnown RBP4.39□□□□□ -1.71
CBF5YLR175W GBP2P25555 427 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71 RIP-Chip
CBF5YLR175W ATP7P30902 174 aa4.39□□□□□ -1.71
CBF5YLR175W ZIP1P31111 875 aa4.39□□□□□ -1.71
CBF5YLR175W AAR2P32357 355 aaPredicted RBP4.39□□□□□ -1.71
CBF5YLR175W TFB1P32776 642 aa4.39□□□□□ -1.71
CBF5YLR175W KKQ8P36004 724 aa4.39□□□□□ -1.71
CBF5YLR175W PIM1P36775 1133 aa4.39□□□□□ -1.71
CBF5YLR175W ATG14P38270 344 aa4.39□□□□□ -1.71
CBF5YLR175W YBR184WP38299 523 aa4.39□□□□□ -1.71
CBF5YLR175W ARB1P40024 610 aaKnown RBP4.39□□□□□ -1.71
CBF5YLR175W AIM22P47051 409 aa4.39□□□□□ -1.71
CBF5YLR175W ALG12P53730 551 aa4.39□□□□□ -1.71
CBF5YLR175W SWS2P53937 143 aa4.39□□□□□ -1.71
CBF5YLR175W RHO3Q00245 231 aaKnown RBP4.39□□□□□ -1.71
CBF5YLR175W YDR476CQ03362 224 aa4.39□□□□□ -1.71
CBF5YLR175W HUA2Q12134 243 aa4.39□□□□□ -1.71
CBF5YLR175W YLL054CQ12244 843 aa4.39□□□□□ -1.71
CBF5YLR175W RGT2Q12300 763 aa4.39□□□□□ -1.71
CBF5YLR175W YKL018C-AQ3E7A7 99 aa4.39□□□□□ -1.71
CBF5YLR175W DST1P07273 309 aa4.38□□□□□ -1.71
CBF5YLR175W RAP1P11938 827 aa4.38□□□□□ -1.71
CBF5YLR175W FUR1P18562 216 aaKnown RBP4.38□□□□□ -1.71
CBF5YLR175W SAN1P22470 610 aa4.38□□□□□ -1.71
CBF5YLR175W TFC1P32367 649 aa4.38□□□□□ -1.71
CBF5YLR175W MRP8P35719 219 aa4.38□□□□□ -1.71
CBF5YLR175W ROT2P38138 954 aa4.38□□□□□ -1.71
CBF5YLR175W SEA4P38164 1038 aa4.38□□□□□ -1.71
CBF5YLR175W ALG14P38242 237 aa4.38□□□□□ -1.71
CBF5YLR175W ELO1P39540 310 aa4.38□□□□□ -1.71
CBF5YLR175W TED1P40533 473 aa4.38□□□□□ -1.71
CBF5YLR175W MNT3P40549 630 aa4.38□□□□□ -1.71
CBF5YLR175W GAB1P41733 394 aa4.38□□□□□ -1.71
CBF5YLR175W MEP2P41948 499 aa4.38□□□□□ -1.71
CBF5YLR175W ZIM17P42844 174 aa4.38□□□□□ -1.71
CBF5YLR175W ILM1P47155 203 aa4.38□□□□□ -1.71
CBF5YLR175W MNN10P50108 393 aaKnown RBP4.38□□□□□ -1.71
CBF5YLR175W YGR250CP53316 781 aaKnown RBP4.38□□□□□ -1.71
CBF5YLR175W YNL140CP53910 189 aa4.38□□□□□ -1.71
CBF5YLR175W ACL4Q03771 387 aa4.38□□□□□ -1.71
CBF5YLR175W CTK1Q03957 528 aaKnown RBP4.38□□□□□ -1.71
CBF5YLR175W HMO1Q03973 246 aaKnown RBP4.38□□□□□ -1.71
CBF5YLR175W MFB1Q04922 465 aa4.38□□□□□ -1.71
CBF5YLR175W YFT2Q06676 274 aa4.38□□□□□ -1.71
CBF5YLR175W THI73Q07904 523 aa4.38□□□□□ -1.71
CBF5YLR175W MUM3Q08750 479 aa4.38□□□□□ -1.71
CBF5YLR175W PFA4Q12006 378 aa4.38□□□□□ -1.71
CBF5YLR175W TY2A-LR1P0C2J4 438 aa4.37□□□□□ -1.71
CBF5YLR175W TY2A-FP0CX61 438 aa4.37□□□□□ -1.71
CBF5YLR175W TY2A-GR2P0CX62 438 aa4.37□□□□□ -1.71
CBF5YLR175W MSS116P15424 664 aaKnown RBP4.37□□□□□ -1.71
CBF5YLR175W CCA1P21269 546 aa4.37□□□□□ -1.71
CBF5YLR175W ERG6P25087 383 aaKnown RBP4.37□□□□□ -1.71
CBF5YLR175W TRX3P25372 127 aa4.37□□□□□ -1.71
CBF5YLR175W TY2A-CP25383 438 aa4.37□□□□□ -1.71
CBF5YLR175W GAR1P28007 205 aaKnown RBP4.37□□□□□ -1.71
CBF5YLR175W FUN30P31380 1131 aa4.37□□□□□ -1.71
CBF5YLR175W PET309P32522 965 aaPredicted RBP4.37□□□□□ -1.71
CBF5YLR175W HES1P35843 434 aa4.37□□□□□ -1.71
CBF5YLR175W NTR2P36118 322 aaPredicted RBP4.37□□□□□ -1.71
CBF5YLR175W MRPL17P36528 281 aa4.37□□□□□ -1.71
CBF5YLR175W YHR033WP38690 423 aa4.37□□□□□ -1.71
CBF5YLR175W HPM1P40481 377 aa4.37□□□□□ -1.71
CBF5YLR175W CAB2P40506 365 aa4.37□□□□□ -1.71
CBF5YLR175W MAM33P40513 266 aa4.37□□□□□ -1.71
CBF5YLR175W APQ12P40532 138 aa4.37□□□□□ -1.71
CBF5YLR175W SEC26P41810 973 aaKnown RBP4.37□□□□□ -1.71
CBF5YLR175W DIM1P41819 318 aaKnown RBP4.37□□□□□ -1.71
CBF5YLR175W PSA1P41940 361 aaKnown RBP4.37□□□□□ -1.71
CBF5YLR175W TY4A-JP47023 414 aa4.37□□□□□ -1.71
CBF5YLR175W SGF73P53165 657 aa4.37□□□□□ -1.71
CBF5YLR175W RTS3P53289 263 aa4.37□□□□□ -1.71
CBF5YLR175W GOR1P53839 350 aa4.37□□□□□ -1.71
CBF5YLR175W SVL3Q03088 825 aaKnown RBP4.37□□□□□ -1.71
CBF5YLR175W TY2A-DR2Q03483 438 aa4.37□□□□□ -1.71
CBF5YLR175W SSQ1Q05931 657 aaPredicted RBP4.37□□□□□ -1.71
CBF5YLR175W ATG26Q06321 1198 aa4.37□□□□□ -1.71
CBF5YLR175W VPS74Q06385 345 aa4.37□□□□□ -1.71
CBF5YLR175W YDL176WQ12027 708 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms