RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C MTR3P48240 250 aaPredicted RBP9.69□□□□□ -0.86
SHB17YKR043C ERG13P54839 491 aaKnown RBP9.69□□□□□ -0.86
SHB17YKR043C RSM10Q03201 203 aa9.69□□□□□ -0.86
SHB17YKR043C APC4Q04601 652 aa9.69□□□□□ -0.86
SHB17YKR043C VID22Q05934 901 aa9.69□□□□□ -0.86
SHB17YKR043C YOR389WQ08912 624 aa9.69□□□□□ -0.86
SHB17YKR043C YPL278CQ08990 100 aa9.69□□□□□ -0.86
SHB17YKR043C GET4Q12125 312 aa9.69□□□□□ -0.86
SHB17YKR043C RPN5Q12250 445 aaKnown RBP9.69□□□□□ -0.86
SHB17YKR043C MXR2P25566 168 aa9.68□□□□□ -0.86
SHB17YKR043C YMC1P32331 307 aa9.68□□□□□ -0.86
SHB17YKR043C RFC3P38629 340 aa9.68□□□□□ -0.86
SHB17YKR043C STS1P38637 319 aa9.68□□□□□ -0.86
SHB17YKR043C MRX1P40050 688 aa9.68□□□□□ -0.86
SHB17YKR043C AYR1P40471 297 aa9.68□□□□□ -0.86
SHB17YKR043C JHD2P47156 728 aaPredicted RBP9.68□□□□□ -0.86
SHB17YKR043C IMA1P53051 589 aa9.68□□□□□ -0.86
SHB17YKR043C SUB1P54000 292 aaKnown RBP9.68□□□□□ -0.86
SHB17YKR043C MSC1Q03104 513 aa9.68□□□□□ -0.86
SHB17YKR043C YET2Q04210 160 aa9.68□□□□□ -0.86
SHB17YKR043C YDR338CQ05497 695 aa9.68□□□□□ -0.86
SHB17YKR043C SGT1Q08446 395 aa9.68□□□□□ -0.86
SHB17YKR043C NTO1Q12311 748 aa9.68□□□□□ -0.86
SHB17YKR043C YKL018C-AQ3E7A7 99 aa9.68□□□□□ -0.86
SHB17YKR043C URA4P20051 364 aa9.67□□□□□ -0.86
SHB17YKR043C PRI2P20457 528 aa9.67□□□□□ -0.86
SHB17YKR043C VPS33P20795 691 aa9.67□□□□□ -0.86
SHB17YKR043C PHO87P25360 923 aa9.67□□□□□ -0.86
SHB17YKR043C GFD2P25370 566 aaKnown RBP9.67□□□□□ -0.86
SHB17YKR043C PHO91P27514 894 aa9.67□□□□□ -0.86
SHB17YKR043C RAD14P28519 371 aa9.67□□□□□ -0.86
SHB17YKR043C CDC12P32468 407 aaKnown RBP9.67□□□□□ -0.86
SHB17YKR043C KAP122P32767 1081 aa9.67□□□□□ -0.86
SHB17YKR043C RPS27AP35997 82 aaKnown RBP9.67□□□□□ -0.86
SHB17YKR043C HEK2P38199 381 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86not detected
SHB17YKR043C RPS27BP38711 82 aa9.67□□□□□ -0.86
SHB17YKR043C PRP39P39682 629 aaKnown RBP9.67□□□□□ -0.86
SHB17YKR043C YIL152WP40455 235 aa9.67□□□□□ -0.86
SHB17YKR043C SEC26P41810 973 aaKnown RBP9.67□□□□□ -0.86
SHB17YKR043C RIB2Q12362 591 aaKnown RBP9.67□□□□□ -0.86
SHB17YKR043C RRP36Q12481 300 aaPredicted RBP9.67□□□□□ -0.86
SHB17YKR043C RAS2P01120 322 aaKnown RBP9.66□□□□□ -0.86
SHB17YKR043C RPL17AP05740 184 aaKnown RBP9.66□□□□□ -0.86
SHB17YKR043C STE7P06784 515 aa9.66□□□□□ -0.86
SHB17YKR043C MRP13P12686 339 aa9.66□□□□□ -0.86
SHB17YKR043C NPR1P22211 790 aa9.66□□□□□ -0.86
SHB17YKR043C SPB1P25582 841 aaPredicted RBP9.66□□□□□ -0.86
SHB17YKR043C MNN2P38069 597 aa9.66□□□□□ -0.86
SHB17YKR043C FRT2P39734 528 aa9.66□□□□□ -0.86
SHB17YKR043C YIL001WP40560 513 aa9.66□□□□□ -0.86
SHB17YKR043C PSA1P41940 361 aaKnown RBP9.66□□□□□ -0.86
SHB17YKR043C CCT7P42943 550 aaKnown RBP9.66□□□□□ -0.86
SHB17YKR043C RPL17BP46990 184 aaKnown RBP9.66□□□□□ -0.86
SHB17YKR043C MPS3P47069 682 aa9.66□□□□□ -0.86
SHB17YKR043C PEX25Q02969 394 aa9.66□□□□□ -0.86
SHB17YKR043C RQC1Q05468 723 aaKnown RBP9.66□□□□□ -0.86
SHB17YKR043C VPS74Q06385 345 aa9.66□□□□□ -0.86
SHB17YKR043C YPR096CO13587 100 aa9.65□□□□□ -0.86
SHB17YKR043C ALG7P07286 448 aa9.65□□□□□ -0.86
SHB17YKR043C PHO81P17442 1178 aa9.65□□□□□ -0.86
SHB17YKR043C SEC17P32602 292 aa9.65□□□□□ -0.86
SHB17YKR043C RPT5P33297 434 aaKnown RBP9.65□□□□□ -0.86
SHB17YKR043C TIM54P47045 478 aa9.65□□□□□ -0.86
SHB17YKR043C UPF3P48412 387 aaKnown RBP9.65□□□□□ -0.86
SHB17YKR043C TPP1Q03796 238 aa9.65□□□□□ -0.86
SHB17YKR043C ATP4P05626 244 aa9.64□□□□□ -0.87
SHB17YKR043C ARD1P07347 238 aaPredicted RBP9.64□□□□□ -0.87
SHB17YKR043C MKK2P32491 506 aa9.64□□□□□ -0.87
SHB17YKR043C CAT2P32796 670 aaKnown RBP9.64□□□□□ -0.87
SHB17YKR043C DOA1P36037 715 aa9.64□□□□□ -0.87
SHB17YKR043C ARC35P53731 342 aaKnown RBP9.64□□□□□ -0.87
SHB17YKR043C GOR1P53839 350 aa9.64□□□□□ -0.87
SHB17YKR043C UBP2Q01476 1272 aa9.64□□□□□ -0.87
SHB17YKR043C RPM2Q02773 1202 aa9.64□□□□□ -0.87
SHB17YKR043C YPL071CQ02864 156 aa9.64□□□□□ -0.87
SHB17YKR043C EFR3Q03653 782 aaKnown RBP9.64□□□□□ -0.87
SHB17YKR043C YHC1Q05900 231 aaKnown RBP9.64□□□□□ -0.87
SHB17YKR043C DIA2Q08496 732 aaPredicted RBP9.64□□□□□ -0.87
SHB17YKR043C ARG81P05085 880 aa9.63□□□□□ -0.87
SHB17YKR043C HOM3P10869 527 aa9.63□□□□□ -0.87
SHB17YKR043C FAA1P30624 700 aaKnown RBP9.63□□□□□ -0.87
SHB17YKR043C ZIP1P31111 875 aa9.63□□□□□ -0.87
SHB17YKR043C TOA1P32773 286 aa9.63□□□□□ -0.87
SHB17YKR043C GLG1P36143 616 aa9.63□□□□□ -0.87
SHB17YKR043C FMP52P40008 231 aa9.63□□□□□ -0.87
SHB17YKR043C STE24P47154 453 aa9.63□□□□□ -0.87
SHB17YKR043C CSL4P53859 292 aaPredicted RBP9.63□□□□□ -0.87
SHB17YKR043C GAD1Q04792 585 aa9.63□□□□□ -0.87
SHB17YKR043C MCA1Q08601 432 aa9.63□□□□□ -0.87
SHB17YKR043C YVC1Q12324 675 aa9.63□□□□□ -0.87
SHB17YKR043C PRP4P20053 465 aaKnown RBP9.62□□□□□ -0.87
SHB17YKR043C SLY41P22215 453 aa9.62□□□□□ -0.87
SHB17YKR043C LDB16P25587 256 aa9.62□□□□□ -0.87
SHB17YKR043C SSO1P32867 290 aa9.62□□□□□ -0.87
SHB17YKR043C RIX1P38883 763 aaPredicted RBP9.62□□□□□ -0.87
SHB17YKR043C PMT4P46971 762 aa9.62□□□□□ -0.87
SHB17YKR043C REC102Q02721 264 aa9.62□□□□□ -0.87
SHB17YKR043C YMR010WQ03687 405 aa9.62□□□□□ -0.87
SHB17YKR043C ISR1Q06098 443 aaKnown RBP9.62□□□□□ -0.87
SHB17YKR043C PUN1Q06991 263 aa9.62□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms