RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C RKM1Q08961 583 aaPredicted RBP2.21□□□□□ -2.06
SHE2YKL130C DAP1Q12091 152 aa2.21□□□□□ -2.06
SHE2YKL130C YDR061WQ12298 539 aa2.21□□□□□ -2.06
SHE2YKL130C HIF1Q12373 385 aa2.21□□□□□ -2.06
SHE2YKL130C ARP6Q12509 438 aa2.21□□□□□ -2.06
SHE2YKL130C YBR298C-AQ8TGK4 73 aa2.21□□□□□ -2.06
SHE2YKL130C SUC2P00724 532 aa2.2□□□□□ -2.06
SHE2YKL130C PDE2P06776 526 aa2.2□□□□□ -2.06
SHE2YKL130C GID7P25569 745 aa2.2□□□□□ -2.06
SHE2YKL130C POT1P27796 417 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
SHE2YKL130C FUN19P28003 413 aaPredicted RBP2.2□□□□□ -2.06
SHE2YKL130C BEM1P29366 551 aa2.2□□□□□ -2.06
SHE2YKL130C SIN4P32259 974 aa2.2□□□□□ -2.06
SHE2YKL130C SMI1P32566 505 aa2.2□□□□□ -2.06
SHE2YKL130C UTR4P32626 227 aa2.2□□□□□ -2.06
SHE2YKL130C PDR3P33200 976 aa2.2□□□□□ -2.06
SHE2YKL130C YPK3P38070 525 aa2.2□□□□□ -2.06
SHE2YKL130C RIM2P38127 377 aa2.2□□□□□ -2.06
SHE2YKL130C LEU5P38702 357 aa2.2□□□□□ -2.06
SHE2YKL130C YER130CP39959 443 aa2.2□□□□□ -2.06
SHE2YKL130C VHS2P40463 436 aa2.2□□□□□ -2.06
SHE2YKL130C AZF1P41696 914 aa2.2□□□□□ -2.06
SHE2YKL130C FYV8P46949 817 aaKnown RBP2.2□□□□□ -2.06
SHE2YKL130C ECM27P47144 725 aa2.2□□□□□ -2.06
SHE2YKL130C DRN1P53255 507 aaKnown RBP2.2□□□□□ -2.06
SHE2YKL130C TOF1P53840 1238 aa2.2□□□□□ -2.06
SHE2YKL130C DSL1P53847 754 aa2.2□□□□□ -2.06
SHE2YKL130C RHO5P53879 331 aaKnown RBP2.2□□□□□ -2.06
SHE2YKL130C NCS2P53923 493 aaPredicted RBP2.2□□□□□ -2.06
SHE2YKL130C YPL014WQ02606 381 aa2.2□□□□□ -2.06
SHE2YKL130C NUP100Q02629 959 aa2.2□□□□□ -2.06
SHE2YKL130C RPN9Q04062 393 aaKnown RBP2.2□□□□□ -2.06
SHE2YKL130C YDR341CQ05506 607 aaKnown RBP2.2□□□□□ -2.06
SHE2YKL130C GLO2Q05584 274 aa2.2□□□□□ -2.06
SHE2YKL130C YLR456WQ06199 204 aa2.2□□□□□ -2.06
SHE2YKL130C KEL3Q08979 651 aaPredicted RBP2.2□□□□□ -2.06
SHE2YKL130C BUG1Q12191 341 aa2.2□□□□□ -2.06
SHE2YKL130C CAR1P00812 333 aaKnown RBP2.19□□□□□ -2.06
SHE2YKL130C SCEIP03882 235 aa2.19□□□□□ -2.06
SHE2YKL130C LEU4P06208 619 aaKnown RBP2.19□□□□□ -2.06
SHE2YKL130C PMR1P13586 950 aa2.19□□□□□ -2.06
SHE2YKL130C GLK1P17709 500 aaKnown RBP2.19□□□□□ -2.06
SHE2YKL130C EXO70P19658 623 aa2.19□□□□□ -2.06
SHE2YKL130C RHB1P25378 209 aa2.19□□□□□ -2.06
SHE2YKL130C GEX1P25596 615 aa2.19□□□□□ -2.06
SHE2YKL130C ATP11P32453 318 aa2.19□□□□□ -2.06
SHE2YKL130C PRP21P32524 280 aaPredicted RBP2.19□□□□□ -2.06
SHE2YKL130C PHD1P36093 366 aa2.19□□□□□ -2.06
SHE2YKL130C ZTA1P38230 334 aaKnown RBP2.19□□□□□ -2.06
SHE2YKL130C SIF2P38262 535 aa2.19□□□□□ -2.06
SHE2YKL130C SLX1P38324 304 aa2.19□□□□□ -2.06
SHE2YKL130C FAD1P38913 306 aa2.19□□□□□ -2.06
SHE2YKL130C YMR147WP40218 223 aaKnown RBP2.19□□□□□ -2.06
SHE2YKL130C YTA12P40341 825 aa2.19□□□□□ -2.06
SHE2YKL130C FET5P43561 622 aa2.19□□□□□ -2.06
SHE2YKL130C EPL1P43572 832 aa2.19□□□□□ -2.06
SHE2YKL130C YJR011CP47086 261 aaPredicted RBP2.19□□□□□ -2.06
SHE2YKL130C YGL082WP53155 381 aa2.19□□□□□ -2.06
SHE2YKL130C GPI1P53306 609 aa2.19□□□□□ -2.06
SHE2YKL130C EKI1Q03764 534 aa2.19□□□□□ -2.06
SHE2YKL130C HSP31Q04432 237 aa2.19□□□□□ -2.06
SHE2YKL130C YFH1Q07540 174 aa2.19□□□□□ -2.06
SHE2YKL130C BSC1Q12140 328 aa2.19□□□□□ -2.06
SHE2YKL130C TFB5Q3E7C1 72 aaPredicted RBP2.19□□□□□ -2.06
SHE2YKL130C HSL1P34244 1518 aa2.18□□□□□ -2.06
SHE2YKL130C TY1B-AO13527 1196 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C MES1P00958 751 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C SEC63P14906 663 aa2.18□□□□□ -2.06
SHE2YKL130C YCR007CP25354 239 aa2.18□□□□□ -2.06
SHE2YKL130C RIM1P32445 135 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C YEL043WP32618 956 aa2.18□□□□□ -2.06
SHE2YKL130C YNK1P36010 153 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C MRPL4P36517 319 aa2.18□□□□□ -2.06
SHE2YKL130C ASC1P38011 319 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C OLA1P38219 394 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C PFF1P38244 976 aa2.18□□□□□ -2.06
SHE2YKL130C YSW1P38280 609 aa2.18□□□□□ -2.06
SHE2YKL130C ERG7P38604 731 aa2.18□□□□□ -2.06
SHE2YKL130C RFC3P38629 340 aa2.18□□□□□ -2.06
SHE2YKL130C RRP3P38712 501 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C KEL1P38853 1164 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C YHR218WP38899 603 aa2.18□□□□□ -2.06
SHE2YKL130C CCT2P39076 527 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C FAA2P39518 744 aa2.18□□□□□ -2.06
SHE2YKL130C CSM2P40465 213 aa2.18□□□□□ -2.06
SHE2YKL130C SYG1P40528 902 aa2.18□□□□□ -2.06
SHE2YKL130C RTS2P40962 232 aa2.18□□□□□ -2.06
SHE2YKL130C PIB2P53191 635 aa2.18□□□□□ -2.06
SHE2YKL130C OCA2P53949 197 aa2.18□□□□□ -2.06
SHE2YKL130C SAM50P53969 484 aa2.18□□□□□ -2.06
SHE2YKL130C ADA2Q02336 434 aa2.18□□□□□ -2.06
SHE2YKL130C IVY1Q04934 453 aa2.18□□□□□ -2.06
SHE2YKL130C DIC1Q06143 298 aa2.18□□□□□ -2.06
SHE2YKL130C DBP9Q06218 594 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C PHO92Q06390 306 aa2.18□□□□□ -2.06
SHE2YKL130C PPT2Q12036 173 aa2.18□□□□□ -2.06
SHE2YKL130C LSP1Q12230 341 aaKnown RBP2.18□□□□□ -2.06
SHE2YKL130C RUP1Q12242 671 aa2.18□□□□□ -2.06
SHE2YKL130C RRD2Q12461 358 aa2.18□□□□□ -2.06
SHE2YKL130C NBL1Q3E7Y6 73 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms