RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W DIS3Q08162 1001 aaKnown RBP3.38□□□□□ -1.87
SWD2YKL018W CUE5Q08412 411 aaKnown RBP3.38□□□□□ -1.87
SWD2YKL018W YOR365CQ08844 703 aa3.38□□□□□ -1.87
SWD2YKL018W PGC1Q08959 321 aa3.38□□□□□ -1.87
SWD2YKL018W NFI1Q12216 726 aa3.38□□□□□ -1.87
SWD2YKL018W SAC3P46674 1301 aa3.38□□□□□ -1.87
SWD2YKL018W MES1P00958 751 aaKnown RBP3.37□□□□□ -1.87
SWD2YKL018W ATP10P18496 279 aa3.37□□□□□ -1.87
SWD2YKL018W CPR3P25719 182 aa3.37□□□□□ -1.87
SWD2YKL018W MSP1P28737 362 aa3.37□□□□□ -1.87
SWD2YKL018W BEM1P29366 551 aa3.37□□□□□ -1.87
SWD2YKL018W HIR2P32480 875 aa3.37□□□□□ -1.87
SWD2YKL018W HEL1P36113 551 aa3.37□□□□□ -1.87
SWD2YKL018W DUG2P38149 878 aa3.37□□□□□ -1.87
SWD2YKL018W KEL1P38853 1164 aaKnown RBP3.37□□□□□ -1.87
SWD2YKL018W MDM31P38880 579 aa3.37□□□□□ -1.87
SWD2YKL018W SER3P40054 469 aa3.37□□□□□ -1.87
SWD2YKL018W YJL132WP47014 750 aa3.37□□□□□ -1.87
SWD2YKL018W DRN1P53255 507 aaKnown RBP3.37□□□□□ -1.87
SWD2YKL018W MSS11Q03825 758 aa3.37□□□□□ -1.87
SWD2YKL018W APC5Q08683 685 aa3.37□□□□□ -1.87
SWD2YKL018W ARP6Q12509 438 aa3.37□□□□□ -1.87
SWD2YKL018W YBR298C-AQ8TGK4 73 aa3.37□□□□□ -1.87
SWD2YKL018W PDE2P06776 526 aa3.36□□□□□ -1.87
SWD2YKL018W RPL1AP0CX43 217 aaKnown RBP3.36□□□□□ -1.87
SWD2YKL018W RPL1BP0CX44 217 aaKnown RBP3.36□□□□□ -1.87
SWD2YKL018W WSS1P38838 269 aa3.36□□□□□ -1.87
SWD2YKL018W POP2P39008 433 aa3.36□□□□□ -1.87
SWD2YKL018W IKS1P47042 667 aa3.36□□□□□ -1.87
SWD2YKL018W ALT2P52892 507 aa3.36□□□□□ -1.87
SWD2YKL018W RPT4P53549 437 aaKnown RBP3.36□□□□□ -1.87
SWD2YKL018W OCA2P53949 197 aa3.36□□□□□ -1.87
SWD2YKL018W RHO4Q00246 291 aa3.36□□□□□ -1.87
SWD2YKL018W DIC1Q06143 298 aa3.36□□□□□ -1.87
SWD2YKL018W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
SWD2YKL018W UAF30Q08747 228 aa3.36□□□□□ -1.87
SWD2YKL018W MTR10Q99189 972 aa3.36□□□□□ -1.87
SWD2YKL018W YLR278CQ05854 1341 aa3.36□□□□□ -1.87
SWD2YKL018W RIP1P08067 215 aa3.35□□□□□ -1.87
SWD2YKL018W TRX1P22217 103 aaKnown RBP3.35□□□□□ -1.87
SWD2YKL018W SGV1P23293 657 aaKnown RBP3.35□□□□□ -1.87
SWD2YKL018W KRE2P27809 442 aa3.35□□□□□ -1.87
SWD2YKL018W ACH1P32316 526 aa3.35□□□□□ -1.87
SWD2YKL018W ATP11P32453 318 aa3.35□□□□□ -1.87
SWD2YKL018W LAS1P36146 502 aaPredicted RBP3.35□□□□□ -1.87
SWD2YKL018W FAD1P38913 306 aa3.35□□□□□ -1.87
SWD2YKL018W KRE9P39005 276 aa3.35□□□□□ -1.87
SWD2YKL018W SYG1P40528 902 aa3.35□□□□□ -1.87
SWD2YKL018W TFG2P41896 400 aaPredicted RBP3.35□□□□□ -1.87
SWD2YKL018W RHO5P53879 331 aaKnown RBP3.35□□□□□ -1.87
SWD2YKL018W KTR5P53966 522 aaPredicted RBP3.35□□□□□ -1.87
SWD2YKL018W PRP42Q03776 544 aaKnown RBP3.35□□□□□ -1.87
SWD2YKL018W GLO2Q05584 274 aa3.35□□□□□ -1.87
SWD2YKL018W YLR456WQ06199 204 aa3.35□□□□□ -1.87
SWD2YKL018W TCB3Q03640 1545 aaKnown RBP3.34□□□□□ -1.87
SWD2YKL018W STF1P01098 86 aa3.34□□□□□ -1.87
SWD2YKL018W RPL6BP05739 176 aaKnown RBP3.34□□□□□ -1.87
SWD2YKL018W SEC62P21825 274 aa3.34□□□□□ -1.87
SWD2YKL018W PHO84P25297 587 aaKnown RBP3.34□□□□□ -1.87
SWD2YKL018W RHB1P25378 209 aa3.34□□□□□ -1.87
SWD2YKL018W RPS2P25443 254 aaKnown RBP3.34□□□□□ -1.87
SWD2YKL018W SMI1P32566 505 aa3.34□□□□□ -1.87
SWD2YKL018W GYP6P32806 458 aa3.34□□□□□ -1.87
SWD2YKL018W ZTA1P38230 334 aaKnown RBP3.34□□□□□ -1.87
SWD2YKL018W SDS24P38314 527 aa3.34□□□□□ -1.87
SWD2YKL018W YER130CP39959 443 aa3.34□□□□□ -1.87
SWD2YKL018W YMR147WP40218 223 aaKnown RBP3.34□□□□□ -1.87
SWD2YKL018W VHS2P40463 436 aa3.34□□□□□ -1.87
SWD2YKL018W GUF1P46943 645 aa3.34□□□□□ -1.87
SWD2YKL018W ECM27P47144 725 aa3.34□□□□□ -1.87
SWD2YKL018W GPI1P53306 609 aa3.34□□□□□ -1.87
SWD2YKL018W NCS2P53923 493 aaPredicted RBP3.34□□□□□ -1.87
SWD2YKL018W RPL6AQ02326 176 aaKnown RBP3.34□□□□□ -1.87
SWD2YKL018W PPM1Q04081 328 aa3.34□□□□□ -1.87
SWD2YKL018W IVY1Q04934 453 aa3.34□□□□□ -1.87
SWD2YKL018W PHO92Q06390 306 aa3.34□□□□□ -1.87
SWD2YKL018W KEL3Q08979 651 aaPredicted RBP3.34□□□□□ -1.87
SWD2YKL018W SKS1Q12505 502 aa3.34□□□□□ -1.87
SWD2YKL018W SUC2P00724 532 aa3.33□□□□□ -1.88
SWD2YKL018W LEU4P06208 619 aaKnown RBP3.33□□□□□ -1.88
SWD2YKL018W VMA2P16140 517 aaKnown RBP3.33□□□□□ -1.88
SWD2YKL018W FUN19P28003 413 aaPredicted RBP3.33□□□□□ -1.88
SWD2YKL018W SIN4P32259 974 aa3.33□□□□□ -1.88
SWD2YKL018W IME2P32581 645 aa3.33□□□□□ -1.88
SWD2YKL018W VPS17P32913 551 aa3.33□□□□□ -1.88
SWD2YKL018W YOX1P34161 385 aa3.33□□□□□ -1.88
SWD2YKL018W RRP1P35178 278 aaPredicted RBP3.33□□□□□ -1.88
SWD2YKL018W SPC34P36131 295 aa3.33□□□□□ -1.88
SWD2YKL018W DAD2P36162 133 aa3.33□□□□□ -1.88
SWD2YKL018W YBP1P38315 674 aa3.33□□□□□ -1.88
SWD2YKL018W KEL2P50090 882 aa3.33□□□□□ -1.88
SWD2YKL018W TOF1P53840 1238 aa3.33□□□□□ -1.88
SWD2YKL018W DSL1P53847 754 aa3.33□□□□□ -1.88
SWD2YKL018W RSA1Q08932 381 aa3.33□□□□□ -1.88
SWD2YKL018W YDR061WQ12298 539 aa3.33□□□□□ -1.88
SWD2YKL018W CAR1P00812 333 aaKnown RBP3.32□□□□□ -1.88
SWD2YKL018W PMR1P13586 950 aa3.32□□□□□ -1.88
SWD2YKL018W GLK1P17709 500 aaKnown RBP3.32□□□□□ -1.88
SWD2YKL018W RPI1P23250 407 aaKnown RBP3.32□□□□□ -1.88
SWD2YKL018W POT1P27796 417 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms