RNA–Protein interactions for RNA: YJR010C-A

SPC1, Transcript of Subunit of the signal peptidase complex (SPC), yeastyeast

Gene SPC1, Length 285 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC1YJR010C-A SOV1Q04748 898 aa2.4□□□□□ -2.03
SPC1YJR010C-A PBA1Q05778 276 aa2.4□□□□□ -2.03
SPC1YJR010C-A TSR2Q06672 205 aaKnown RBP2.4□□□□□ -2.03
SPC1YJR010C-A ERV2Q12284 196 aa2.4□□□□□ -2.03
SPC1YJR010C-A RRP12Q12754 1228 aaKnown RBP2.4□□□□□ -2.03
SPC1YJR010C-A SUP35P05453 685 aaKnown RBP2.39□□□□□ -2.03
SPC1YJR010C-A RED1P14291 827 aa2.39□□□□□ -2.03
SPC1YJR010C-A RML2P32611 393 aa2.39□□□□□ -2.03
SPC1YJR010C-A YMR155WQ03795 547 aa2.39□□□□□ -2.03
SPC1YJR010C-A ARX1Q03862 593 aaKnown RBP2.39□□□□□ -2.03
SPC1YJR010C-A SYF1Q04048 859 aaPredicted RBP2.39□□□□□ -2.03
SPC1YJR010C-A YLR278CQ05854 1341 aa2.39□□□□□ -2.03
SPC1YJR010C-A ADH2P00331 348 aaKnown RBP2.38□□□□□ -2.03
SPC1YJR010C-A CDC31P06704 161 aaKnown RBP2.38□□□□□ -2.03
SPC1YJR010C-A RIP1P08067 215 aa2.38□□□□□ -2.03
SPC1YJR010C-A SPS4P09937 338 aa2.38□□□□□ -2.03
SPC1YJR010C-A SPT15P13393 240 aaKnown RBP2.38□□□□□ -2.03
SPC1YJR010C-A APE2P32454 952 aaKnown RBP2.38□□□□□ -2.03
SPC1YJR010C-A ECM25P32525 599 aa2.38□□□□□ -2.03
SPC1YJR010C-A YBL059WP34224 193 aa2.38□□□□□ -2.03
SPC1YJR010C-A RIB5P38145 238 aa2.38□□□□□ -2.03
SPC1YJR010C-A MIX23P38162 196 aa2.38□□□□□ -2.03
SPC1YJR010C-A YBR137WP38276 179 aa2.38□□□□□ -2.03
SPC1YJR010C-A VHC1P38329 1120 aa2.38□□□□□ -2.03
SPC1YJR010C-A GPD2P41911 440 aaKnown RBP2.38□□□□□ -2.03
SPC1YJR010C-A VTC2P43585 828 aa2.38□□□□□ -2.03
SPC1YJR010C-A DLD2P46681 530 aaKnown RBP2.38□□□□□ -2.03
SPC1YJR010C-A YGR250CP53316 781 aaKnown RBP2.38□□□□□ -2.03
SPC1YJR010C-A FRE4P53746 719 aa2.38□□□□□ -2.03
SPC1YJR010C-A TOF1P53840 1238 aa2.38□□□□□ -2.03
SPC1YJR010C-A NCS2P53923 493 aaPredicted RBP2.38□□□□□ -2.03
SPC1YJR010C-A MDM1Q01846 1127 aa2.38□□□□□ -2.03
SPC1YJR010C-A HSP31Q04432 237 aa2.38□□□□□ -2.03
SPC1YJR010C-A TSR1Q07381 788 aaKnown RBP2.38□□□□□ -2.03
SPC1YJR010C-A ESA1Q08649 445 aa2.38□□□□□ -2.03
SPC1YJR010C-A CLN3P13365 580 aa2.37□□□□□ -2.03
SPC1YJR010C-A RPI1P23250 407 aaKnown RBP2.37□□□□□ -2.03
SPC1YJR010C-A TIP1P27654 210 aaPredicted RBP2.37□□□□□ -2.03
SPC1YJR010C-A UTP9P38882 575 aaKnown RBP2.37□□□□□ -2.03
SPC1YJR010C-A MST28P39552 234 aa2.37□□□□□ -2.03
SPC1YJR010C-A LAM5P43560 674 aa2.37□□□□□ -2.03
SPC1YJR010C-A WWM1P43582 211 aaKnown RBP2.37□□□□□ -2.03
SPC1YJR010C-A NCA3P46955 337 aa2.37□□□□□ -2.03
SPC1YJR010C-A MNP1P53163 194 aaPredicted RBP2.37□□□□□ -2.03
SPC1YJR010C-A DSL1P53847 754 aa2.37□□□□□ -2.03
SPC1YJR010C-A YLR287CQ05881 355 aa2.37□□□□□ -2.03
SPC1YJR010C-A MDM30Q05930 598 aa2.37□□□□□ -2.03
SPC1YJR010C-A YLR108CQ12259 485 aa2.37□□□□□ -2.03
SPC1YJR010C-A ORT1Q12375 292 aa2.37□□□□□ -2.03
SPC1YJR010C-A RTP1Q12751 981 aa2.37□□□□□ -2.03
SPC1YJR010C-A ISN1Q99312 450 aa2.37□□□□□ -2.03
SPC1YJR010C-A RPS8AP0CX39 200 aaKnown RBP2.36□□□□□ -2.03
SPC1YJR010C-A RPS8BP0CX40 200 aaKnown RBP2.36□□□□□ -2.03
SPC1YJR010C-A SLY1P22213 666 aa2.36□□□□□ -2.03
SPC1YJR010C-A SPR1P32603 445 aa2.36□□□□□ -2.03
SPC1YJR010C-A PRS1P32895 427 aaKnown RBP2.36□□□□□ -2.03
SPC1YJR010C-A PIM1P36775 1133 aa2.36□□□□□ -2.03
SPC1YJR010C-A RFC3P38629 340 aa2.36□□□□□ -2.03
SPC1YJR010C-A RPS0BP46654 252 aaKnown RBP2.36□□□□□ -2.03
SPC1YJR010C-A PHB2P50085 310 aa2.36□□□□□ -2.03
SPC1YJR010C-A VTA1Q06263 330 aa2.36□□□□□ -2.03
SPC1YJR010C-A TMC1Q08422 150 aaPredicted RBP2.36□□□□□ -2.03
SPC1YJR010C-A MUM3Q08750 479 aa2.36□□□□□ -2.03
SPC1YJR010C-A RRG1Q12167 365 aaPredicted RBP2.36□□□□□ -2.03
SPC1YJR010C-A PKH2Q12236 1081 aaKnown RBP2.36□□□□□ -2.03
SPC1YJR010C-A RAD61Q99359 647 aa2.36□□□□□ -2.03
SPC1YJR010C-A HHF1P02309 103 aaKnown RBP2.35□□□□□ -2.03
SPC1YJR010C-A ILV5P06168 395 aaKnown RBP2.35□□□□□ -2.03
SPC1YJR010C-A GPH1P06738 902 aaKnown RBP2.35□□□□□ -2.03
SPC1YJR010C-A NAT1P12945 854 aaKnown RBP2.35□□□□□ -2.03
SPC1YJR010C-A SNT1P25357 1226 aa2.35□□□□□ -2.03
SPC1YJR010C-A GEX1P25596 615 aa2.35□□□□□ -2.03
SPC1YJR010C-A CRM1P30822 1084 aaKnown RBP2.35□□□□□ -2.03
SPC1YJR010C-A SIN4P32259 974 aa2.35□□□□□ -2.03
SPC1YJR010C-A GYP6P32806 458 aa2.35□□□□□ -2.03
SPC1YJR010C-A PAD1P33751 242 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
SPC1YJR010C-A HCS1P34243 683 aa2.35□□□□□ -2.03
SPC1YJR010C-A STB6P36085 766 aa2.35□□□□□ -2.03
SPC1YJR010C-A OTU2P38747 307 aaKnown RBP2.35□□□□□ -2.03
SPC1YJR010C-A LYS1P38998 373 aaRIP-Chip data2.35□□□□□ -2.03not detected
SPC1YJR010C-A LSM5P40089 93 aaKnown RBP2.35□□□□□ -2.03
SPC1YJR010C-A YGR210CP42942 411 aa2.35□□□□□ -2.03
SPC1YJR010C-A MRP51Q02950 344 aa2.35□□□□□ -2.03
SPC1YJR010C-A RRN11Q04712 507 aa2.35□□□□□ -2.03
SPC1YJR010C-A MHR1Q06630 226 aa2.35□□□□□ -2.03
SPC1YJR010C-A TIM18Q08749 192 aa2.35□□□□□ -2.03
SPC1YJR010C-A SOD1P00445 154 aaKnown RBP2.34□□□□□ -2.03
SPC1YJR010C-A ISY1P21374 235 aaPredicted RBP2.34□□□□□ -2.03
SPC1YJR010C-A CDC60P26637 1090 aaKnown RBP2.34□□□□□ -2.03
SPC1YJR010C-A BEM1P29366 551 aa2.34□□□□□ -2.03
SPC1YJR010C-A REC114P32841 428 aa2.34□□□□□ -2.03
SPC1YJR010C-A NAB3P38996 802 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SPC1YJR010C-A PRM5P40476 318 aa2.34□□□□□ -2.03
SPC1YJR010C-A YJR011CP47086 261 aaPredicted RBP2.34□□□□□ -2.03
SPC1YJR010C-A ECM27P47144 725 aa2.34□□□□□ -2.03
SPC1YJR010C-A HMS2P47175 358 aa2.34□□□□□ -2.03
SPC1YJR010C-A MTM1P53320 366 aa2.34□□□□□ -2.03
SPC1YJR010C-A IBD2P53892 351 aa2.34□□□□□ -2.03
SPC1YJR010C-A GIR2Q03768 265 aaPredicted RBP2.34□□□□□ -2.03
SPC1YJR010C-A PPM1Q04081 328 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms