RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W YGR117CP53270 476 aa4.33□□□□□ -1.72
AVT1YJR001W YGR127WP53275 312 aa4.33□□□□□ -1.72
AVT1YJR001W SOL4P53315 255 aa4.33□□□□□ -1.72
AVT1YJR001W COQ6P53318 479 aa4.33□□□□□ -1.72
AVT1YJR001W RRN9P53437 365 aa4.33□□□□□ -1.72
AVT1YJR001W YNL134CP53912 376 aaKnown RBP4.33□□□□□ -1.72
AVT1YJR001W YKR005CQ02203 525 aa4.33□□□□□ -1.72
AVT1YJR001W FIN1Q03898 291 aa4.33□□□□□ -1.72
AVT1YJR001W THI7Q05998 598 aa4.33□□□□□ -1.72
AVT1YJR001W YPR196WQ06595 470 aa4.33□□□□□ -1.72
AVT1YJR001W AIM6Q07716 390 aa4.33□□□□□ -1.72
AVT1YJR001W YLL007CQ07799 665 aa4.33□□□□□ -1.72
AVT1YJR001W SRO7Q12038 1033 aa4.33□□□□□ -1.72
AVT1YJR001W GET4Q12125 312 aa4.33□□□□□ -1.72
AVT1YJR001W SFG1Q12507 346 aa4.33□□□□□ -1.72
AVT1YJR001W SIR4P11978 1358 aa4.33□□□□□ -1.72
AVT1YJR001W HIP1P06775 603 aa4.32□□□□□ -1.72
AVT1YJR001W TUB1P09733 447 aaKnown RBP4.32□□□□□ -1.72
AVT1YJR001W VMA16P23968 213 aa4.32□□□□□ -1.72
AVT1YJR001W RAD57P25301 460 aa4.32□□□□□ -1.72
AVT1YJR001W IMG1P25626 169 aa4.32□□□□□ -1.72
AVT1YJR001W YCR061WP25639 631 aa4.32□□□□□ -1.72
AVT1YJR001W NDI1P32340 513 aa4.32□□□□□ -1.72
AVT1YJR001W AAP1P37898 856 aaKnown RBP4.32□□□□□ -1.72
AVT1YJR001W YBR139WP38109 508 aa4.32□□□□□ -1.72
AVT1YJR001W PFF1P38244 976 aa4.32□□□□□ -1.72
AVT1YJR001W YHR033WP38690 423 aa4.32□□□□□ -1.72
AVT1YJR001W SEN34P39707 275 aa4.32□□□□□ -1.72
AVT1YJR001W PZF1P39933 429 aa4.32□□□□□ -1.72
AVT1YJR001W VAB2P40003 282 aa4.32□□□□□ -1.72
AVT1YJR001W ELO3P40319 345 aa4.32□□□□□ -1.72
AVT1YJR001W YIR007WP40566 764 aa4.32□□□□□ -1.72
AVT1YJR001W TAH11P47112 604 aa4.32□□□□□ -1.72
AVT1YJR001W FMS1P50264 508 aa4.32□□□□□ -1.72
AVT1YJR001W BIO3P50277 480 aa4.32□□□□□ -1.72
AVT1YJR001W MRK1P50873 501 aa4.32□□□□□ -1.72
AVT1YJR001W RMD9P53140 646 aaKnown RBP4.32□□□□□ -1.72
AVT1YJR001W BOP3P53958 396 aa4.32□□□□□ -1.72
AVT1YJR001W YKR011CQ02209 353 aa4.32□□□□□ -1.72
AVT1YJR001W UTP6Q02354 440 aaKnown RBP4.32□□□□□ -1.72
AVT1YJR001W SWP1Q02795 286 aa4.32□□□□□ -1.72
AVT1YJR001W YDR239CQ03780 787 aa4.32□□□□□ -1.72
AVT1YJR001W RPC11Q04307 110 aaPredicted RBP4.32□□□□□ -1.72
AVT1YJR001W ARG7Q04728 441 aa4.32□□□□□ -1.72
AVT1YJR001W YPR091CQ06833 770 aa4.32□□□□□ -1.72
AVT1YJR001W YOL019WQ08157 551 aa4.32□□□□□ -1.72
AVT1YJR001W REX4Q08237 289 aa4.32□□□□□ -1.72
AVT1YJR001W GPN2Q08726 347 aaPredicted RBP4.32□□□□□ -1.72
AVT1YJR001W MUM3Q08750 479 aa4.32□□□□□ -1.72
AVT1YJR001W SLM3Q12093 417 aa4.32□□□□□ -1.72
AVT1YJR001W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
AVT1YJR001W SVS1Q12254 260 aa4.32□□□□□ -1.72
AVT1YJR001W BBP1Q12365 385 aa4.32□□□□□ -1.72
AVT1YJR001W MRP10O75012 95 aa4.32□□□□□ -1.72
AVT1YJR001W CHS2P14180 963 aa4.32□□□□□ -1.72
AVT1YJR001W TYR1P20049 452 aa4.32□□□□□ -1.72
AVT1YJR001W PET18P25362 215 aa4.32□□□□□ -1.72
AVT1YJR001W NTH1P32356 751 aa4.32□□□□□ -1.72
AVT1YJR001W RML2P32611 393 aa4.32□□□□□ -1.72
AVT1YJR001W MYO3P36006 1272 aa4.32□□□□□ -1.72
AVT1YJR001W KTR3P38130 404 aaPredicted RBP4.32□□□□□ -1.72
AVT1YJR001W TAE1P38340 232 aa4.32□□□□□ -1.72
AVT1YJR001W PTC2P39966 464 aaKnown RBP4.32□□□□□ -1.72
AVT1YJR001W MMF1P40185 145 aaKnown RBP4.32□□□□□ -1.72
AVT1YJR001W GLG2P47011 380 aa4.32□□□□□ -1.72
AVT1YJR001W ZAP1P47043 880 aa4.32□□□□□ -1.72
AVT1YJR001W EMC2P47133 292 aaKnown RBP4.32□□□□□ -1.72
AVT1YJR001W CCC1P47818 322 aa4.32□□□□□ -1.72
AVT1YJR001W PRP31P49704 494 aaPredicted RBP4.32□□□□□ -1.72
AVT1YJR001W YGR045CP53229 120 aa4.32□□□□□ -1.72
AVT1YJR001W PRM1P53835 661 aa4.32□□□□□ -1.72
AVT1YJR001W CWC25P53854 179 aaKnown RBP4.32□□□□□ -1.72
AVT1YJR001W PET117Q02771 107 aa4.32□□□□□ -1.72
AVT1YJR001W TRS31Q03337 283 aa4.32□□□□□ -1.72
AVT1YJR001W BCH1Q05029 724 aa4.32□□□□□ -1.72
AVT1YJR001W VTA1Q06263 330 aa4.32□□□□□ -1.72
AVT1YJR001W YFH1Q07540 174 aa4.32□□□□□ -1.72
AVT1YJR001W YCL001W-BQ96VH2 84 aa4.32□□□□□ -1.72
AVT1YJR001W YLR278CQ05854 1341 aa4.32□□□□□ -1.72
AVT1YJR001W IPP1P00817 287 aaKnown RBP4.31□□□□□ -1.72
AVT1YJR001W GAL80P04387 435 aa4.31□□□□□ -1.72
AVT1YJR001W SRV2P17555 526 aaKnown RBP4.31□□□□□ -1.72
AVT1YJR001W ARO4P32449 370 aaKnown RBP4.31□□□□□ -1.72
AVT1YJR001W HXT3P32466 567 aaKnown RBP4.31□□□□□ -1.72
AVT1YJR001W ATO2P32907 282 aa4.31□□□□□ -1.72
AVT1YJR001W VFA1P40080 203 aa4.31□□□□□ -1.72
AVT1YJR001W GAB1P41733 394 aa4.31□□□□□ -1.72
AVT1YJR001W OTU1P43558 301 aa4.31□□□□□ -1.72
AVT1YJR001W RPA34P47006 233 aaPredicted RBP4.31□□□□□ -1.72
AVT1YJR001W PET130P47065 347 aa4.31□□□□□ -1.72
AVT1YJR001W YGL185CP53100 379 aa4.31□□□□□ -1.72
AVT1YJR001W MND1P53102 219 aa4.31□□□□□ -1.72
AVT1YJR001W YML037CQ03703 340 aa4.31□□□□□ -1.72
AVT1YJR001W PEX12Q04370 399 aa4.31□□□□□ -1.72
AVT1YJR001W FAR8Q05040 523 aa4.31□□□□□ -1.72
AVT1YJR001W SYT1Q06836 1226 aa4.31□□□□□ -1.72
AVT1YJR001W ALG6Q12001 544 aaKnown RBP4.31□□□□□ -1.72
AVT1YJR001W YPR022CQ12139 1133 aa4.31□□□□□ -1.72
AVT1YJR001W MDM20Q12387 796 aaKnown RBP4.31□□□□□ -1.72
AVT1YJR001W SCEIP03882 235 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms