RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C YMR155WQ03795 547 aa3.24□□□□□ -1.89
CTK2YJL006C MHR1Q06630 226 aa3.24□□□□□ -1.89
CTK2YJL006C RRG1Q12167 365 aaPredicted RBP3.24□□□□□ -1.89
CTK2YJL006C RRP12Q12754 1228 aaKnown RBP3.24□□□□□ -1.89
CTK2YJL006C RIP1P08067 215 aa3.23□□□□□ -1.89
CTK2YJL006C YAR066WP0CX18 203 aa3.23□□□□□ -1.89
CTK2YJL006C YHR214WP0CX19 203 aa3.23□□□□□ -1.89
CTK2YJL006C SPT15P13393 240 aaKnown RBP3.23□□□□□ -1.89
CTK2YJL006C FUR1P18562 216 aaKnown RBP3.23□□□□□ -1.89
CTK2YJL006C RML2P32611 393 aa3.23□□□□□ -1.89
CTK2YJL006C NFU1P32860 256 aa3.23□□□□□ -1.89
CTK2YJL006C NIP100P33420 868 aa3.23□□□□□ -1.89
CTK2YJL006C CCT2P39076 527 aaKnown RBP3.23□□□□□ -1.89
CTK2YJL006C NOC2P39744 710 aaKnown RBP3.23□□□□□ -1.89
CTK2YJL006C LSM5P40089 93 aaKnown RBP3.23□□□□□ -1.89
CTK2YJL006C RRT5P43607 289 aa3.23□□□□□ -1.89
CTK2YJL006C FMS1P50264 508 aa3.23□□□□□ -1.89
CTK2YJL006C CAF40P53829 373 aa3.23□□□□□ -1.89
CTK2YJL006C KTR5P53966 522 aaPredicted RBP3.23□□□□□ -1.89
CTK2YJL006C ODC1Q03028 310 aa3.23□□□□□ -1.89
CTK2YJL006C HSP31Q04432 237 aa3.23□□□□□ -1.89
CTK2YJL006C SIL1Q08199 421 aa3.23□□□□□ -1.89
CTK2YJL006C HIP1P06775 603 aa3.22□□□□□ -1.89
CTK2YJL006C NAT1P12945 854 aaKnown RBP3.22□□□□□ -1.89
CTK2YJL006C CPR1P14832 162 aaKnown RBP3.22□□□□□ -1.89
CTK2YJL006C MRP4P32902 394 aa3.22□□□□□ -1.89
CTK2YJL006C VHC1P38329 1120 aa3.22□□□□□ -1.89
CTK2YJL006C GPD2P41911 440 aaKnown RBP3.22□□□□□ -1.89
CTK2YJL006C POP6P53218 158 aa3.22□□□□□ -1.89
CTK2YJL006C DSL1P53847 754 aa3.22□□□□□ -1.89
CTK2YJL006C SPC19Q03954 165 aa3.22□□□□□ -1.89
CTK2YJL006C SNT1P25357 1226 aa3.21□□□□□ -1.9
CTK2YJL006C BYE1P36106 594 aa3.21□□□□□ -1.9
CTK2YJL006C YIP1P53039 248 aa3.21□□□□□ -1.9
CTK2YJL006C PCP1P53259 346 aa3.21□□□□□ -1.9
CTK2YJL006C YGR250CP53316 781 aaKnown RBP3.21□□□□□ -1.9
CTK2YJL006C YDR387CQ04162 555 aa3.21□□□□□ -1.9
CTK2YJL006C CHS1P08004 1131 aa3.2□□□□□ -1.9
CTK2YJL006C SEC63P14906 663 aa3.2□□□□□ -1.9
CTK2YJL006C ECM25P32525 599 aa3.2□□□□□ -1.9
CTK2YJL006C PRS1P32895 427 aaKnown RBP3.2□□□□□ -1.9
CTK2YJL006C YCR041WP37265 110 aa3.2□□□□□ -1.9
CTK2YJL006C RFC3P38629 340 aa3.2□□□□□ -1.9
CTK2YJL006C NDT80P38830 627 aa3.2□□□□□ -1.9
CTK2YJL006C SAS2P40963 338 aa3.2□□□□□ -1.9
CTK2YJL006C COS5P47187 383 aa3.2□□□□□ -1.9
CTK2YJL006C YIF1P53845 314 aaKnown RBP3.2□□□□□ -1.9
CTK2YJL006C ARX1Q03862 593 aaKnown RBP3.2□□□□□ -1.9
CTK2YJL006C RRP45Q05636 305 aaKnown RBP3.2□□□□□ -1.9
CTK2YJL006C COS7Q07788 383 aa3.2□□□□□ -1.9
CTK2YJL006C MUM3Q08750 479 aa3.2□□□□□ -1.9
CTK2YJL006C YPL199CQ08954 240 aa3.2□□□□□ -1.9
CTK2YJL006C HEM15P16622 393 aa3.19□□□□□ -1.9
CTK2YJL006C REC107P21651 314 aa3.19□□□□□ -1.9
CTK2YJL006C YCR051WP25631 222 aa3.19□□□□□ -1.9
CTK2YJL006C SPR1P32603 445 aa3.19□□□□□ -1.9
CTK2YJL006C YME2P32843 850 aa3.19□□□□□ -1.9
CTK2YJL006C PAD1P33751 242 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
CTK2YJL006C NAT2P37293 288 aa3.19□□□□□ -1.9
CTK2YJL006C ARA1P38115 344 aa3.19□□□□□ -1.9
CTK2YJL006C NTC20P38302 140 aaPredicted RBP3.19□□□□□ -1.9
CTK2YJL006C YJR011CP47086 261 aaPredicted RBP3.19□□□□□ -1.9
CTK2YJL006C ECM27P47144 725 aa3.19□□□□□ -1.9
CTK2YJL006C YGL138CP53122 345 aa3.19□□□□□ -1.9
CTK2YJL006C YLR152CP54072 576 aa3.19□□□□□ -1.9
CTK2YJL006C THP3Q12049 470 aaKnown RBP3.19□□□□□ -1.9
CTK2YJL006C HSP42Q12329 375 aa3.19□□□□□ -1.9
CTK2YJL006C YLR278CQ05854 1341 aa3.19□□□□□ -1.9
CTK2YJL006C HIS4P00815 799 aaKnown RBP3.18□□□□□ -1.9
CTK2YJL006C RPI1P23250 407 aaKnown RBP3.18□□□□□ -1.9
CTK2YJL006C GEX1P25596 615 aa3.18□□□□□ -1.9
CTK2YJL006C SIN4P32259 974 aa3.18□□□□□ -1.9
CTK2YJL006C APE2P32454 952 aaKnown RBP3.18□□□□□ -1.9
CTK2YJL006C YBL059WP34224 193 aa3.18□□□□□ -1.9
CTK2YJL006C MIX23P38162 196 aa3.18□□□□□ -1.9
CTK2YJL006C MST28P39552 234 aa3.18□□□□□ -1.9
CTK2YJL006C SSU1P41930 458 aa3.18□□□□□ -1.9
CTK2YJL006C YGR210CP42942 411 aa3.18□□□□□ -1.9
CTK2YJL006C RPS0BP46654 252 aaKnown RBP3.18□□□□□ -1.9
CTK2YJL006C SSN8P47821 323 aa3.18□□□□□ -1.9
CTK2YJL006C IBD2P53892 351 aa3.18□□□□□ -1.9
CTK2YJL006C SKO1Q02100 647 aa3.18□□□□□ -1.9
CTK2YJL006C MRP51Q02950 344 aa3.18□□□□□ -1.9
CTK2YJL006C RRN11Q04712 507 aa3.18□□□□□ -1.9
CTK2YJL006C ISN1Q99312 450 aa3.18□□□□□ -1.9
CTK2YJL006C YRF1-4O13559 1382 aa3.17□□□□□ -1.9
CTK2YJL006C SAM1P10659 382 aaKnown RBP3.17□□□□□ -1.9
CTK2YJL006C PDX1P16451 410 aa3.17□□□□□ -1.9
CTK2YJL006C SAM2P19358 384 aaKnown RBP3.17□□□□□ -1.9
CTK2YJL006C ISY1P21374 235 aaPredicted RBP3.17□□□□□ -1.9
CTK2YJL006C ADK2P26364 225 aa3.17□□□□□ -1.9
CTK2YJL006C TIP1P27654 210 aaPredicted RBP3.17□□□□□ -1.9
CTK2YJL006C KRE2P27809 442 aa3.17□□□□□ -1.9
CTK2YJL006C PIM1P36775 1133 aa3.17□□□□□ -1.9
CTK2YJL006C YFL067WP43537 175 aa3.17□□□□□ -1.9
CTK2YJL006C GOR1P53839 350 aa3.17□□□□□ -1.9
CTK2YJL006C KAP120Q02932 1032 aa3.17□□□□□ -1.9
CTK2YJL006C YDR131CQ03899 556 aa3.17□□□□□ -1.9
CTK2YJL006C ROY1Q04847 553 aa3.17□□□□□ -1.9
CTK2YJL006C DON1Q05610 365 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms