RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC80YIL144W NBL1Q3E7Y6 73 aa3.22□□□□□ -1.89
NDC80YIL144W JIP3O13555 125 aa3.21□□□□□ -1.89
NDC80YIL144W STE3P06783 470 aa3.21□□□□□ -1.89
NDC80YIL144W CLC1P17891 233 aa3.21□□□□□ -1.89
NDC80YIL144W RPS2P25443 254 aaKnown RBP3.21□□□□□ -1.89
NDC80YIL144W HSP104P31539 908 aaKnown RBP3.21□□□□□ -1.89
NDC80YIL144W ECM4P36156 370 aa3.21□□□□□ -1.89
NDC80YIL144W ATP3P38077 311 aaKnown RBP3.21□□□□□ -1.89
NDC80YIL144W ULP2P40537 1034 aaPredicted RBP3.21□□□□□ -1.89
NDC80YIL144W VID30P53076 958 aa3.21□□□□□ -1.89
NDC80YIL144W YGL138CP53122 345 aa3.21□□□□□ -1.89
NDC80YIL144W PNC1P53184 216 aaKnown RBP3.21□□□□□ -1.89
NDC80YIL144W RRP46P53256 223 aaPredicted RBP3.21□□□□□ -1.89
NDC80YIL144W MPP6P53725 186 aaPredicted RBP3.21□□□□□ -1.89
NDC80YIL144W UTP6Q02354 440 aaKnown RBP3.21□□□□□ -1.89
NDC80YIL144W LGE1Q02796 332 aaKnown RBP3.21□□□□□ -1.89
NDC80YIL144W SWF1Q04629 336 aa3.21□□□□□ -1.89
NDC80YIL144W TSR1Q07381 788 aaKnown RBP3.21□□□□□ -1.89
NDC80YIL144W CRC1Q12289 327 aa3.21□□□□□ -1.89
NDC80YIL144W RAD61Q99359 647 aa3.21□□□□□ -1.89
NDC80YIL144W YLR278CQ05854 1341 aa3.21□□□□□ -1.9
NDC80YIL144W CBP1P07252 654 aa3.21□□□□□ -1.9
NDC80YIL144W SNF3P10870 884 aa3.21□□□□□ -1.9
NDC80YIL144W YBR139WP38109 508 aa3.21□□□□□ -1.9
NDC80YIL144W MNL1P38888 796 aa3.21□□□□□ -1.9
NDC80YIL144W CFD1P40558 293 aa3.21□□□□□ -1.9
NDC80YIL144W GCD14P46959 383 aaPredicted RBP3.21□□□□□ -1.9
NDC80YIL144W AIM22P47051 409 aa3.21□□□□□ -1.9
NDC80YIL144W PIB2P53191 635 aa3.21□□□□□ -1.9
NDC80YIL144W EFM5P53200 248 aaKnown RBP3.21□□□□□ -1.9
NDC80YIL144W BOP3P53958 396 aa3.21□□□□□ -1.9
NDC80YIL144W FIN1Q03898 291 aa3.21□□□□□ -1.9
NDC80YIL144W URC2Q04411 772 aa3.21□□□□□ -1.9
NDC80YIL144W ECM30Q06673 1274 aa3.21□□□□□ -1.9
NDC80YIL144W AHC1Q12433 566 aa3.21□□□□□ -1.9
NDC80YIL144W IKI3Q06706 1349 aaKnown RBP3.2□□□□□ -1.9
NDC80YIL144W STE2D6VTK4 431 aa3.2□□□□□ -1.9
NDC80YIL144W SPE2P21182 396 aa3.2□□□□□ -1.9
NDC80YIL144W BOS1P25385 244 aa3.2□□□□□ -1.9
NDC80YIL144W IDH2P28241 369 aaKnown RBP3.2□□□□□ -1.9
NDC80YIL144W HCS1P34243 683 aa3.2□□□□□ -1.9
NDC80YIL144W YKL070WP36087 169 aa3.2□□□□□ -1.9
NDC80YIL144W RPL32P38061 130 aaKnown RBP3.2□□□□□ -1.9
NDC80YIL144W SIP3P38717 1229 aa3.2□□□□□ -1.9
NDC80YIL144W DBP8P38719 431 aa3.2□□□□□ -1.9
NDC80YIL144W SCC4P40090 624 aa3.2□□□□□ -1.9
NDC80YIL144W YJL132WP47014 750 aa3.2□□□□□ -1.9
NDC80YIL144W YPT11P48559 417 aa3.2□□□□□ -1.9
NDC80YIL144W RMD9P53140 646 aaKnown RBP3.2□□□□□ -1.9
NDC80YIL144W NUP100Q02629 959 aa3.2□□□□□ -1.9
NDC80YIL144W ACL4Q03771 387 aa3.2□□□□□ -1.9
NDC80YIL144W BCP1Q06338 283 aa3.2□□□□□ -1.9
NDC80YIL144W GIS3Q12418 502 aa3.2□□□□□ -1.9
NDC80YIL144W YCP4P25349 247 aaKnown RBP3.2□□□□□ -1.9
NDC80YIL144W GAC1P28006 793 aa3.2□□□□□ -1.9
NDC80YIL144W NDI1P32340 513 aa3.2□□□□□ -1.9
NDC80YIL144W SRB4P32569 687 aa3.2□□□□□ -1.9
NDC80YIL144W CBF5P33322 483 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
NDC80YIL144W MSR1P38714 643 aa3.2□□□□□ -1.9
NDC80YIL144W XBP1P40489 647 aa3.2□□□□□ -1.9
NDC80YIL144W MSS2P40990 351 aa3.2□□□□□ -1.9
NDC80YIL144W PTR3P43606 678 aa3.2□□□□□ -1.9
NDC80YIL144W STB2P46679 850 aa3.2□□□□□ -1.9
NDC80YIL144W BNA3P47039 444 aaKnown RBP3.2□□□□□ -1.9
NDC80YIL144W UBP8P50102 471 aa3.2□□□□□ -1.9
NDC80YIL144W CGR1P53188 120 aa3.2□□□□□ -1.9
NDC80YIL144W TIM21P53220 239 aa3.2□□□□□ -1.9
NDC80YIL144W YGR127WP53275 312 aa3.2□□□□□ -1.9
NDC80YIL144W RPT4P53549 437 aaKnown RBP3.2□□□□□ -1.9
NDC80YIL144W DSL1P53847 754 aa3.2□□□□□ -1.9
NDC80YIL144W KTR5P53966 522 aaPredicted RBP3.2□□□□□ -1.9
NDC80YIL144W CSI1Q04368 295 aa3.2□□□□□ -1.9
NDC80YIL144W SSQ1Q05931 657 aaPredicted RBP3.2□□□□□ -1.9
NDC80YIL144W YFH1Q07540 174 aa3.2□□□□□ -1.9
NDC80YIL144W EDE1P34216 1381 aa3.19□□□□□ -1.9
NDC80YIL144W PEP4P07267 405 aaKnown RBP3.19□□□□□ -1.9
NDC80YIL144W RPL42AP0CX27 106 aaKnown RBP3.19□□□□□ -1.9
NDC80YIL144W RPL42BP0CX28 106 aaKnown RBP3.19□□□□□ -1.9
NDC80YIL144W SPO7P18410 259 aa3.19□□□□□ -1.9
NDC80YIL144W MCM4P30665 933 aaKnown RBP3.19□□□□□ -1.9
NDC80YIL144W YKL023WP36103 277 aaKnown RBP3.19□□□□□ -1.9
NDC80YIL144W ICS2P38284 255 aa3.19□□□□□ -1.9
NDC80YIL144W SLX1P38324 304 aa3.19□□□□□ -1.9
NDC80YIL144W YMR147WP40218 223 aaKnown RBP3.19□□□□□ -1.9
NDC80YIL144W RPA34P47006 233 aaPredicted RBP3.19□□□□□ -1.9
NDC80YIL144W YGR149WP48236 432 aa3.19□□□□□ -1.9
NDC80YIL144W YGL185CP53100 379 aa3.19□□□□□ -1.9
NDC80YIL144W BUD32P53323 261 aa3.19□□□□□ -1.9
NDC80YIL144W PRM1P53835 661 aa3.19□□□□□ -1.9
NDC80YIL144W KTR6P54070 446 aa3.19□□□□□ -1.9
NDC80YIL144W MRPS17Q03246 237 aaPredicted RBP3.19□□□□□ -1.9
NDC80YIL144W ATC1Q04005 294 aa3.19□□□□□ -1.9
NDC80YIL144W SMA2Q04658 369 aa3.19□□□□□ -1.9
NDC80YIL144W STE23Q06010 1027 aa3.19□□□□□ -1.9
NDC80YIL144W ORM2Q06144 216 aa3.19□□□□□ -1.9
NDC80YIL144W YLR173WQ06247 608 aa3.19□□□□□ -1.9
NDC80YIL144W YDL218WQ07629 317 aa3.19□□□□□ -1.9
NDC80YIL144W YLL007CQ07799 665 aa3.19□□□□□ -1.9
NDC80YIL144W ETT1Q08421 412 aaKnown RBP3.19□□□□□ -1.9
NDC80YIL144W ARG81P05085 880 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 531.6 ms