RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W TSL1P38427 1098 aaKnown RBP10.78□□□□□ -0.68
SIM1YIL123W KXD1P53158 218 aa10.78□□□□□ -0.68
SIM1YIL123W IGO1P53897 168 aa10.78□□□□□ -0.68
SIM1YIL123W PRP3Q03338 469 aaPredicted RBP10.78□□□□□ -0.68
SIM1YIL123W TY2A-DR2Q03483 438 aa10.78□□□□□ -0.68
SIM1YIL123W EAF1Q06337 982 aa10.78□□□□□ -0.68
SIM1YIL123W ARR1Q06596 294 aa10.78□□□□□ -0.68
SIM1YIL123W GYP1Q08484 637 aa10.78□□□□□ -0.68
SIM1YIL123W PUS7Q08647 676 aaKnown RBP10.78□□□□□ -0.68
SIM1YIL123W TY2A-BQ12260 438 aa10.78□□□□□ -0.68
SIM1YIL123W TY2A-OR2Q12293 438 aa10.78□□□□□ -0.68
SIM1YIL123W TY2A-DR1Q12392 438 aa10.78□□□□□ -0.68
SIM1YIL123W TY2A-OR1Q12439 438 aa10.78□□□□□ -0.68
SIM1YIL123W TY2A-DR3Q99303 438 aa10.78□□□□□ -0.68
SIM1YIL123W UBC8P28263 218 aa10.77□□□□□ -0.68
SIM1YIL123W APQ12P40532 138 aa10.77□□□□□ -0.68
SIM1YIL123W GUS1P46655 708 aaKnown RBP RIP-Chip data10.77□□□□□ -0.68not detected
SIM1YIL123W YJL043WP47053 257 aa10.77□□□□□ -0.68
SIM1YIL123W YPL071CQ02864 156 aa10.77□□□□□ -0.68
SIM1YIL123W YDR179W-AQ03983 463 aa10.77□□□□□ -0.68
SIM1YIL123W DBP9Q06218 594 aaKnown RBP10.77□□□□□ -0.68
SIM1YIL123W YLL032CQ07834 825 aaKnown RBP RIP-Chip data10.77□□□□□ -0.68 RIP-Chip
SIM1YIL123W RAD59Q12223 238 aa10.77□□□□□ -0.68
SIM1YIL123W YDL199CQ12407 687 aa10.77□□□□□ -0.68
SIM1YIL123W GPH1P06738 902 aaKnown RBP10.76□□□□□ -0.69
SIM1YIL123W SPT15P13393 240 aaKnown RBP10.76□□□□□ -0.69
SIM1YIL123W YKR015CP36111 568 aa10.76□□□□□ -0.69
SIM1YIL123W GPI8P49018 411 aa10.76□□□□□ -0.69
SIM1YIL123W RRN5Q02983 363 aa10.76□□□□□ -0.69
SIM1YIL123W SWF1Q04629 336 aa10.76□□□□□ -0.69
SIM1YIL123W ENT2Q05785 613 aa10.76□□□□□ -0.69
SIM1YIL123W DAP1Q12091 152 aa10.76□□□□□ -0.69
SIM1YIL123W HAL9Q12180 1030 aa10.76□□□□□ -0.69
SIM1YIL123W NUP2P32499 720 aa10.75□□□□□ -0.69
SIM1YIL123W MRPL6P32904 214 aa10.75□□□□□ -0.69
SIM1YIL123W SPT23P35210 1082 aa10.75□□□□□ -0.69
SIM1YIL123W LHS1P36016 881 aa10.75□□□□□ -0.69
SIM1YIL123W DSF2P38213 736 aa10.75□□□□□ -0.69
SIM1YIL123W MTG2P38860 518 aa10.75□□□□□ -0.69
SIM1YIL123W PSA1P41940 361 aaKnown RBP10.75□□□□□ -0.69
SIM1YIL123W FAR7P43592 221 aa10.75□□□□□ -0.69
SIM1YIL123W PMT4P46971 762 aa10.75□□□□□ -0.69
SIM1YIL123W BIO3P50277 480 aa10.75□□□□□ -0.69
SIM1YIL123W SGF73P53165 657 aa10.75□□□□□ -0.69
SIM1YIL123W ARE2P53629 642 aaKnown RBP10.75□□□□□ -0.69
SIM1YIL123W YNR021WP53723 404 aaKnown RBP10.75□□□□□ -0.69
SIM1YIL123W YPL113CQ02961 396 aa10.75□□□□□ -0.69
SIM1YIL123W YMR099CQ03161 297 aaKnown RBP10.75□□□□□ -0.69
SIM1YIL123W SMP3Q04174 516 aa10.75□□□□□ -0.69
SIM1YIL123W MCA1Q08601 432 aa10.75□□□□□ -0.69
SIM1YIL123W NAG1Q8TGN9 163 aa10.75□□□□□ -0.69
SIM1YIL123W HRP1Q99383 534 aaKnown RBP10.75□□□□□ -0.69
SIM1YIL123W MSB2P32334 1306 aa10.75□□□□□ -0.69
SIM1YIL123W FAB1P34756 2278 aa10.75□□□□□ -0.69
SIM1YIL123W MDM35O60200 86 aa10.75□□□□□ -0.69
SIM1YIL123W TIM9O74700 87 aa10.75□□□□□ -0.69
SIM1YIL123W TYR1P20049 452 aa10.75□□□□□ -0.69
SIM1YIL123W GRR1P24814 1151 aa10.75□□□□□ -0.69
SIM1YIL123W MRPL37P36532 105 aa10.75□□□□□ -0.69
SIM1YIL123W GOS1P38736 223 aa10.75□□□□□ -0.69
SIM1YIL123W YEL020CP39994 560 aa10.75□□□□□ -0.69
SIM1YIL123W MPM1P40364 252 aa10.75□□□□□ -0.69
SIM1YIL123W AZF1P41696 914 aa10.75□□□□□ -0.69
SIM1YIL123W RTS3P53289 263 aa10.75□□□□□ -0.69
SIM1YIL123W SNO2P53823 222 aa10.75□□□□□ -0.69
SIM1YIL123W CTK1Q03957 528 aaKnown RBP10.75□□□□□ -0.69
SIM1YIL123W HPF1Q05164 967 aa10.75□□□□□ -0.69
SIM1YIL123W ATG38Q05789 226 aaKnown RBP10.75□□□□□ -0.69
SIM1YIL123W RRT8Q08219 342 aa10.75□□□□□ -0.69
SIM1YIL123W RIB3Q99258 208 aa10.75□□□□□ -0.69
SIM1YIL123W ALG7P07286 448 aa10.74□□□□□ -0.69
SIM1YIL123W SCL1P21243 252 aaKnown RBP10.74□□□□□ -0.69
SIM1YIL123W URE2P23202 354 aaKnown RBP10.74□□□□□ -0.69
SIM1YIL123W CTS1P29029 562 aa10.74□□□□□ -0.69
SIM1YIL123W MAP2P38174 421 aaKnown RBP10.74□□□□□ -0.69
SIM1YIL123W HXT5P38695 592 aa10.74□□□□□ -0.69
SIM1YIL123W DED81P38707 554 aaKnown RBP10.74□□□□□ -0.69
SIM1YIL123W MSS2P40990 351 aa10.74□□□□□ -0.69
SIM1YIL123W COQ5P49017 307 aa10.74□□□□□ -0.69
SIM1YIL123W SMA1Q02651 245 aa10.74□□□□□ -0.69
SIM1YIL123W SWP1Q02795 286 aa10.74□□□□□ -0.69
SIM1YIL123W GAD1Q04792 585 aa10.74□□□□□ -0.69
SIM1YIL123W RPS17AP02407 136 aaKnown RBP10.73□□□□□ -0.69
SIM1YIL123W RPS17BP14127 136 aaKnown RBP10.73□□□□□ -0.69
SIM1YIL123W YCL049CP25577 312 aa10.73□□□□□ -0.69
SIM1YIL123W IDH2P28241 369 aaKnown RBP10.73□□□□□ -0.69
SIM1YIL123W ZUO1P32527 433 aaKnown RBP10.73□□□□□ -0.69
SIM1YIL123W RRN10P38204 145 aa10.73□□□□□ -0.69
SIM1YIL123W UBP14P38237 781 aaKnown RBP10.73□□□□□ -0.69
SIM1YIL123W ECM8P38246 354 aa10.73□□□□□ -0.69
SIM1YIL123W YBR138CP38277 524 aa10.73□□□□□ -0.69
SIM1YIL123W DLD3P39976 496 aaKnown RBP10.73□□□□□ -0.69
SIM1YIL123W MNT3P40549 630 aa10.73□□□□□ -0.69
SIM1YIL123W MAD2P40958 196 aa10.73□□□□□ -0.69
SIM1YIL123W TY4A-JP47023 414 aa10.73□□□□□ -0.69
SIM1YIL123W SDT1P53078 280 aa10.73□□□□□ -0.69
SIM1YIL123W RRP45Q05636 305 aaKnown RBP10.73□□□□□ -0.69
SIM1YIL123W RSA3Q05942 220 aaKnown RBP10.73□□□□□ -0.69
SIM1YIL123W TPK3P05986 398 aa10.72□□□□□ -0.69
SIM1YIL123W PET127P32606 800 aa10.72□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms