RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W PAN6P40459 309 aa2□□□□□ -2.09
URM1YIL008W MET18P40469 1032 aa2□□□□□ -2.09
URM1YIL008W TFG2P41896 400 aaPredicted RBP2□□□□□ -2.09
URM1YIL008W LAM5P43560 674 aa2□□□□□ -2.09
URM1YIL008W NCA3P46955 337 aa2□□□□□ -2.09
URM1YIL008W DSL1P53847 754 aa2□□□□□ -2.09
URM1YIL008W HXT11P54862 567 aa2□□□□□ -2.09
URM1YIL008W HER2Q03557 464 aa2□□□□□ -2.09
URM1YIL008W PKH2Q12236 1081 aaKnown RBP2□□□□□ -2.09
URM1YIL008W SOD1P00445 154 aaKnown RBP1.99□□□□□ -2.09
URM1YIL008W ARG3P05150 338 aa1.99□□□□□ -2.09
URM1YIL008W PRP21P32524 280 aaPredicted RBP1.99□□□□□ -2.09
URM1YIL008W ECM25P32525 599 aa1.99□□□□□ -2.09
URM1YIL008W PRS1P32895 427 aaKnown RBP1.99□□□□□ -2.09
URM1YIL008W CCT2P39076 527 aaKnown RBP1.99□□□□□ -2.09
URM1YIL008W VMA13P41807 478 aaKnown RBP1.99□□□□□ -2.09
URM1YIL008W YMR181CQ03231 154 aa1.99□□□□□ -2.09
URM1YIL008W GIR2Q03768 265 aaPredicted RBP1.99□□□□□ -2.09
URM1YIL008W YDR387CQ04162 555 aa1.99□□□□□ -2.09
URM1YIL008W YMR027WQ04371 470 aa1.99□□□□□ -2.09
URM1YIL008W HSP31Q04432 237 aa1.99□□□□□ -2.09
URM1YIL008W TIM18Q08749 192 aa1.99□□□□□ -2.09
URM1YIL008W RIM20Q12033 661 aa1.99□□□□□ -2.09
URM1YIL008W YPR022CQ12139 1133 aa1.99□□□□□ -2.09
URM1YIL008W WTM1Q12363 437 aaKnown RBP1.99□□□□□ -2.09
URM1YIL008W CCH1P50077 2039 aa1.99□□□□□ -2.09
URM1YIL008W SPS4P09937 338 aa1.98□□□□□ -2.09
URM1YIL008W ITR1P30605 584 aa1.98□□□□□ -2.09
URM1YIL008W GPI10P30777 616 aa1.98□□□□□ -2.09
URM1YIL008W MNS1P32906 549 aa1.98□□□□□ -2.09
URM1YIL008W NIP100P33420 868 aa1.98□□□□□ -2.09
URM1YIL008W ARF3P40994 183 aaRIP-Chip data1.98□□□□□ -2.09not detected
URM1YIL008W ECM27P47144 725 aa1.98□□□□□ -2.09
URM1YIL008W SHY1P53266 389 aa1.98□□□□□ -2.09
URM1YIL008W JJJ1P53863 590 aa1.98□□□□□ -2.09
URM1YIL008W PPM1Q04081 328 aa1.98□□□□□ -2.09
URM1YIL008W RQC1Q05468 723 aaKnown RBP1.98□□□□□ -2.09
URM1YIL008W MED1Q12321 566 aa1.98□□□□□ -2.09
URM1YIL008W HIS4P00815 799 aaKnown RBP1.97□□□□□ -2.09
URM1YIL008W GPH1P06738 902 aaKnown RBP1.97□□□□□ -2.09
URM1YIL008W RPS8AP0CX39 200 aaKnown RBP1.97□□□□□ -2.09
URM1YIL008W RPS8BP0CX40 200 aaKnown RBP1.97□□□□□ -2.09
URM1YIL008W NAT1P12945 854 aaKnown RBP1.97□□□□□ -2.09
URM1YIL008W SLY1P22213 666 aa1.97□□□□□ -2.09
URM1YIL008W APE2P32454 952 aaKnown RBP1.97□□□□□ -2.09
URM1YIL008W UTP9P38882 575 aaKnown RBP1.97□□□□□ -2.09
URM1YIL008W VTC2P43585 828 aa1.97□□□□□ -2.09
URM1YIL008W MTM1P53320 366 aa1.97□□□□□ -2.09
URM1YIL008W FRE4P53746 719 aa1.97□□□□□ -2.09
URM1YIL008W YIF1P53845 314 aaKnown RBP1.97□□□□□ -2.09
URM1YIL008W CWC25P53854 179 aaKnown RBP1.97□□□□□ -2.09
URM1YIL008W KTR5P53966 522 aaPredicted RBP1.97□□□□□ -2.09
URM1YIL008W TIM10P87108 93 aa1.97□□□□□ -2.09
URM1YIL008W PEX25Q02969 394 aa1.97□□□□□ -2.09
URM1YIL008W RSN1Q03516 953 aa1.97□□□□□ -2.09
URM1YIL008W YLR278CQ05854 1341 aa1.96□□□□□ -2.1
URM1YIL008W TEF1P02994 458 aaKnown RBP1.96□□□□□ -2.1
URM1YIL008W ARG4P04076 463 aaPredicted RBP1.96□□□□□ -2.1
URM1YIL008W TOP1P04786 769 aa1.96□□□□□ -2.1
URM1YIL008W NFT1P0CE68 1218 aa1.96□□□□□ -2.1
URM1YIL008W RPI1P23250 407 aaKnown RBP1.96□□□□□ -2.1
URM1YIL008W VHC1P38329 1120 aa1.96□□□□□ -2.1
URM1YIL008W MSG5P38590 489 aa1.96□□□□□ -2.1
URM1YIL008W LYS1P38998 373 aaRIP-Chip data1.96□□□□□ -2.1not detected
URM1YIL008W YNR048WP53740 393 aa1.96□□□□□ -2.1
URM1YIL008W SNX3Q08826 162 aaKnown RBP1.96□□□□□ -2.1
URM1YIL008W FDH1Q08911 376 aa1.96□□□□□ -2.1
URM1YIL008W GRX6Q12438 231 aa1.96□□□□□ -2.1
URM1YIL008W TRP1P00912 224 aa1.95□□□□□ -2.1
URM1YIL008W RIP1P08067 215 aa1.95□□□□□ -2.1
URM1YIL008W MRP7P12687 371 aa1.95□□□□□ -2.1
URM1YIL008W PPH22P23595 377 aa1.95□□□□□ -2.1
URM1YIL008W MUD1P32605 298 aaKnown RBP1.95□□□□□ -2.1
URM1YIL008W YBR137WP38276 179 aa1.95□□□□□ -2.1
URM1YIL008W OTU2P38747 307 aaKnown RBP1.95□□□□□ -2.1
URM1YIL008W YHR054CP38780 354 aa1.95□□□□□ -2.1
URM1YIL008W SMF1P38925 575 aa1.95□□□□□ -2.1
URM1YIL008W ESL1P40456 1118 aa1.95□□□□□ -2.1
URM1YIL008W SAS2P40963 338 aa1.95□□□□□ -2.1
URM1YIL008W VTA1Q06263 330 aa1.95□□□□□ -2.1
URM1YIL008W YDL121CQ07541 149 aa1.95□□□□□ -2.1
URM1YIL008W SGT1Q08446 395 aa1.95□□□□□ -2.1
URM1YIL008W RRI2Q12348 645 aa1.95□□□□□ -2.1
URM1YIL008W ORT1Q12375 292 aa1.95□□□□□ -2.1
URM1YIL008W SEC63P14906 663 aa1.94□□□□□ -2.1
URM1YIL008W CKA1P15790 372 aa1.94□□□□□ -2.1
URM1YIL008W LSB5P25369 354 aa1.94□□□□□ -2.1
URM1YIL008W HXT3P32466 567 aaKnown RBP1.94□□□□□ -2.1
URM1YIL008W KKQ8P36004 724 aa1.94□□□□□ -2.1
URM1YIL008W RFC3P38629 340 aa1.94□□□□□ -2.1
URM1YIL008W YJR011CP47086 261 aaPredicted RBP1.94□□□□□ -2.1
URM1YIL008W HMS2P47175 358 aa1.94□□□□□ -2.1
URM1YIL008W SYF1Q04048 859 aaPredicted RBP1.94□□□□□ -2.1
URM1YIL008W MET17P06106 444 aa1.93□□□□□ -2.1
URM1YIL008W CYC3P06182 269 aa1.93□□□□□ -2.1
URM1YIL008W RPL3P14126 387 aaKnown RBP1.93□□□□□ -2.1
URM1YIL008W SNT1P25357 1226 aa1.93□□□□□ -2.1
URM1YIL008W POP5P28005 173 aa1.93□□□□□ -2.1
URM1YIL008W UTH1P36135 365 aa1.93□□□□□ -2.1
URM1YIL008W IRC6P43615 237 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms