RNA–Protein interactions for RNA: YHR214C-C

YHR214C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YHR214C-C, Length 1,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHR214C-CYHR214C-C PPH22P23595 377 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C APE2P32454 952 aaKnown RBP2.29□□□□□ -2.04
YHR214C-CYHR214C-C NIP100P33420 868 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C RIB5P38145 238 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C SMF1P38925 575 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C MST28P39552 234 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C LAM5P43560 674 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C IRC6P43615 237 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C NCA3P46955 337 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C SDT1P53078 280 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C TSR2Q06672 205 aaKnown RBP2.29□□□□□ -2.04
YHR214C-CYHR214C-C RRG7Q08774 242 aaPredicted RBP2.29□□□□□ -2.04
YHR214C-CYHR214C-C PKH2Q12236 1081 aaKnown RBP2.29□□□□□ -2.04
YHR214C-CYHR214C-C GRX6Q12438 231 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C YLR278CQ05854 1341 aa2.29□□□□□ -2.04
YHR214C-CYHR214C-C CKA1P15790 372 aa2.28□□□□□ -2.04
YHR214C-CYHR214C-C TIP1P27654 210 aaPredicted RBP2.28□□□□□ -2.04
YHR214C-CYHR214C-C PRP21P32524 280 aaPredicted RBP2.28□□□□□ -2.04
YHR214C-CYHR214C-C ECM25P32525 599 aa2.28□□□□□ -2.04
YHR214C-CYHR214C-C VHC1P38329 1120 aa2.28□□□□□ -2.04
YHR214C-CYHR214C-C CCT2P39076 527 aaKnown RBP2.28□□□□□ -2.04
YHR214C-CYHR214C-C PRM5P40476 318 aa2.28□□□□□ -2.04
YHR214C-CYHR214C-C ECM27P47144 725 aa2.28□□□□□ -2.04
YHR214C-CYHR214C-C MNP1P53163 194 aaPredicted RBP2.28□□□□□ -2.04
YHR214C-CYHR214C-C YIF1P53845 314 aaKnown RBP2.28□□□□□ -2.04
YHR214C-CYHR214C-C MRPL19P53875 158 aa2.28□□□□□ -2.04
YHR214C-CYHR214C-C SUB1P54000 292 aaKnown RBP2.28□□□□□ -2.04
YHR214C-CYHR214C-C VTA1Q06263 330 aa2.28□□□□□ -2.04
YHR214C-CYHR214C-C TIM18Q08749 192 aa2.28□□□□□ -2.04
YHR214C-CYHR214C-C YPR022CQ12139 1133 aa2.28□□□□□ -2.04
YHR214C-CYHR214C-C RAD61Q99359 647 aa2.28□□□□□ -2.04
YHR214C-CYHR214C-C HIS4P00815 799 aaKnown RBP2.27□□□□□ -2.05
YHR214C-CYHR214C-C GPH1P06738 902 aaKnown RBP2.27□□□□□ -2.05
YHR214C-CYHR214C-C CLN3P13365 580 aa2.27□□□□□ -2.05
YHR214C-CYHR214C-C ROX1P25042 368 aa2.27□□□□□ -2.05
YHR214C-CYHR214C-C HXT1P32465 570 aa2.27□□□□□ -2.05
YHR214C-CYHR214C-C PIM1P36775 1133 aa2.27□□□□□ -2.05
YHR214C-CYHR214C-C NDE1P40215 560 aa2.27□□□□□ -2.05
YHR214C-CYHR214C-C ESL1P40456 1118 aa2.27□□□□□ -2.05
YHR214C-CYHR214C-C REE1P40893 198 aa2.27□□□□□ -2.05
YHR214C-CYHR214C-C VMA13P41807 478 aaKnown RBP2.27□□□□□ -2.05
YHR214C-CYHR214C-C FRE4P53746 719 aa2.27□□□□□ -2.05
YHR214C-CYHR214C-C MDG1P53885 366 aa2.27□□□□□ -2.05
YHR214C-CYHR214C-C KTR5P53966 522 aaPredicted RBP2.27□□□□□ -2.05
YHR214C-CYHR214C-C ARG4P04076 463 aaPredicted RBP2.26□□□□□ -2.05
YHR214C-CYHR214C-C PET123P17558 318 aa2.26□□□□□ -2.05
YHR214C-CYHR214C-C HXT3P32466 567 aaKnown RBP2.26□□□□□ -2.05
YHR214C-CYHR214C-C SWD3P38123 315 aa2.26□□□□□ -2.05
YHR214C-CYHR214C-C YHR054CP38780 354 aa2.26□□□□□ -2.05
YHR214C-CYHR214C-C TIS11P47977 285 aa2.26□□□□□ -2.05
YHR214C-CYHR214C-C HER2Q03557 464 aa2.26□□□□□ -2.05
YHR214C-CYHR214C-C HRI1Q05905 244 aaKnown RBP2.26□□□□□ -2.05
YHR214C-CYHR214C-C MRPL35Q06678 367 aa2.26□□□□□ -2.05
YHR214C-CYHR214C-C REX4Q08237 289 aa2.26□□□□□ -2.05
YHR214C-CYHR214C-C HRT3Q12347 344 aa2.26□□□□□ -2.05
YHR214C-CYHR214C-C RIP1P08067 215 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C RED1P14291 827 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C ISY1P21374 235 aaPredicted RBP2.25□□□□□ -2.05
YHR214C-CYHR214C-C SLY1P22213 666 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C CLB3P24870 427 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C DAL2P25335 343 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C RVS161P25343 265 aaKnown RBP2.25□□□□□ -2.05
YHR214C-CYHR214C-C RPN12P32496 274 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C HCS1P34243 683 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C ARA1P38115 344 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C LYS1P38998 373 aaRIP-Chip data2.25□□□□□ -2.05not detected
YHR214C-CYHR214C-C DLD2P46681 530 aaKnown RBP2.25□□□□□ -2.05
YHR214C-CYHR214C-C FMS1P50264 508 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C PPM1Q04081 328 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C SIL1Q08199 421 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C RTN2Q12443 393 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C ADH2P00331 348 aaKnown RBP2.25□□□□□ -2.05
YHR214C-CYHR214C-C TEF1P02994 458 aaKnown RBP2.25□□□□□ -2.05
YHR214C-CYHR214C-C MNS1P32906 549 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C PAN6P40459 309 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C SAS2P40963 338 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C YNR048WP53740 393 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C HXT11P54862 567 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C PEX25Q02969 394 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C YMR181CQ03231 154 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C MHR1Q06630 226 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C SGT1Q08446 395 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C SNX3Q08826 162 aaKnown RBP2.25□□□□□ -2.05
YHR214C-CYHR214C-C RTP1Q12751 981 aa2.25□□□□□ -2.05
YHR214C-CYHR214C-C INH1P01097 85 aa2.24□□□□□ -2.05
YHR214C-CYHR214C-C SRV2P17555 526 aaKnown RBP2.24□□□□□ -2.05
YHR214C-CYHR214C-C CLC1P17891 233 aa2.24□□□□□ -2.05
YHR214C-CYHR214C-C CDC60P26637 1090 aaKnown RBP2.24□□□□□ -2.05
YHR214C-CYHR214C-C ITR1P30605 584 aa2.24□□□□□ -2.05
YHR214C-CYHR214C-C MUD1P32605 298 aaKnown RBP2.24□□□□□ -2.05
YHR214C-CYHR214C-C SAS3P34218 831 aa2.24□□□□□ -2.05
YHR214C-CYHR214C-C RPS0BP46654 252 aaKnown RBP2.24□□□□□ -2.05
YHR214C-CYHR214C-C YJR011CP47086 261 aaPredicted RBP2.24□□□□□ -2.05
YHR214C-CYHR214C-C HMS2P47175 358 aa2.24□□□□□ -2.05
YHR214C-CYHR214C-C YGL039WP53183 348 aaKnown RBP2.24□□□□□ -2.05
YHR214C-CYHR214C-C CWC25P53854 179 aaKnown RBP2.24□□□□□ -2.05
YHR214C-CYHR214C-C RPA49Q01080 415 aaPredicted RBP2.24□□□□□ -2.05
YHR214C-CYHR214C-C TAF11Q04226 346 aa2.24□□□□□ -2.05
YHR214C-CYHR214C-C RRP45Q05636 305 aaKnown RBP2.24□□□□□ -2.05
YHR214C-CYHR214C-C COG4Q06096 861 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms