RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W BUD7Q08754 746 aa7.26□□□□□ -1.25
PEX28YHR150W UIP4Q08926 304 aa7.26□□□□□ -1.25
PEX28YHR150W PST2Q12335 198 aaKnown RBP7.26□□□□□ -1.25
PEX28YHR150W PST1Q12355 444 aa7.26□□□□□ -1.25
PEX28YHR150W DCP1Q12517 231 aaPredicted RBP7.26□□□□□ -1.25
PEX28YHR150W MHT1Q12525 324 aa7.26□□□□□ -1.25
PEX28YHR150W CDC31P06704 161 aaKnown RBP7.25□□□□□ -1.25
PEX28YHR150W GAL3P13045 520 aa7.25□□□□□ -1.25
PEX28YHR150W RAM1P22007 431 aa7.25□□□□□ -1.25
PEX28YHR150W SGV1P23293 657 aaKnown RBP7.25□□□□□ -1.25
PEX28YHR150W SPS19P32573 292 aaKnown RBP7.25□□□□□ -1.25
PEX28YHR150W SEC17P32602 292 aa7.25□□□□□ -1.25
PEX28YHR150W TIP20P33891 701 aa7.25□□□□□ -1.25
PEX28YHR150W GLG1P36143 616 aa7.25□□□□□ -1.25
PEX28YHR150W ARN2P38724 620 aa7.25□□□□□ -1.25
PEX28YHR150W YLF2P38746 405 aa7.25□□□□□ -1.25
PEX28YHR150W DUN1P39009 513 aa7.25□□□□□ -1.25
PEX28YHR150W YEL020CP39994 560 aa7.25□□□□□ -1.25
PEX28YHR150W TPA1P40032 644 aaKnown RBP7.25□□□□□ -1.25
PEX28YHR150W MEP1P40260 492 aa7.25□□□□□ -1.25
PEX28YHR150W SOK1P40317 901 aa7.25□□□□□ -1.25
PEX28YHR150W SYG1P40528 902 aa7.25□□□□□ -1.25
PEX28YHR150W ERG10P41338 398 aaKnown RBP7.25□□□□□ -1.25
PEX28YHR150W YFL066CP43538 392 aa7.25□□□□□ -1.25
PEX28YHR150W GLG2P47011 380 aa7.25□□□□□ -1.25
PEX28YHR150W TOM22P49334 152 aa7.25□□□□□ -1.25
PEX28YHR150W PRM8P53174 237 aa7.25□□□□□ -1.25
PEX28YHR150W MPS1P54199 764 aa7.25□□□□□ -1.25
PEX28YHR150W RRP17Q04031 235 aaPredicted RBP7.25□□□□□ -1.25
PEX28YHR150W MCA1Q08601 432 aa7.25□□□□□ -1.25
PEX28YHR150W PER33Q12144 273 aa7.25□□□□□ -1.25
PEX28YHR150W YPL245WQ12179 454 aaKnown RBP7.25□□□□□ -1.25
PEX28YHR150W YGK3Q12222 375 aaPredicted RBP7.25□□□□□ -1.25
PEX28YHR150W YOR338WQ99326 363 aa7.25□□□□□ -1.25
PEX28YHR150W Q0010Q9ZZX9 128 aa7.25□□□□□ -1.25
PEX28YHR150W CDC4P07834 779 aa7.24□□□□□ -1.25
PEX28YHR150W RSR1P13856 272 aa7.24□□□□□ -1.25
PEX28YHR150W APA1P16550 321 aaKnown RBP7.24□□□□□ -1.25
PEX28YHR150W KGD1P20967 1014 aaKnown RBP7.24□□□□□ -1.25
PEX28YHR150W KIN3P22209 435 aa7.24□□□□□ -1.25
PEX28YHR150W RPL24BP24000 155 aaKnown RBP7.24□□□□□ -1.25
PEX28YHR150W ACH1P32316 526 aa7.24□□□□□ -1.25
PEX28YHR150W RMA1P36001 430 aaKnown RBP7.24□□□□□ -1.25
PEX28YHR150W YCR087C-AP37263 153 aa7.24□□□□□ -1.25
PEX28YHR150W HSE1P38753 452 aa7.24□□□□□ -1.25
PEX28YHR150W ATG7P38862 630 aa7.24□□□□□ -1.25
PEX28YHR150W MPM1P40364 252 aa7.24□□□□□ -1.25
PEX28YHR150W MSE1P48525 536 aa7.24□□□□□ -1.25
PEX28YHR150W IRC15Q02733 499 aa7.24□□□□□ -1.25
PEX28YHR150W RRN5Q02983 363 aa7.24□□□□□ -1.25
PEX28YHR150W TMN2Q04562 672 aa7.24□□□□□ -1.25
PEX28YHR150W PEX10Q05568 337 aa7.24□□□□□ -1.25
PEX28YHR150W NEJ1Q06148 342 aa7.24□□□□□ -1.25
PEX28YHR150W MCD1Q12158 566 aa7.24□□□□□ -1.25
PEX28YHR150W YOR012WQ12351 137 aa7.24□□□□□ -1.25
PEX28YHR150W GTT2Q12390 233 aa7.24□□□□□ -1.25
PEX28YHR150W YCL012CQ8J0M4 134 aa7.24□□□□□ -1.25
PEX28YHR150W SRN2Q99176 213 aa7.24□□□□□ -1.25
PEX28YHR150W TAO3P40468 2376 aa7.24□□□□□ -1.25
PEX28YHR150W CPA1P07258 411 aaKnown RBP7.24□□□□□ -1.25
PEX28YHR150W PET122P10355 254 aa7.24□□□□□ -1.25
PEX28YHR150W TSL1P38427 1098 aaKnown RBP7.24□□□□□ -1.25
PEX28YHR150W SSN3P39073 555 aa7.24□□□□□ -1.25
PEX28YHR150W MNN9P39107 395 aaKnown RBP7.24□□□□□ -1.25
PEX28YHR150W RPH1P39956 796 aa7.24□□□□□ -1.25
PEX28YHR150W SPF1P39986 1215 aaKnown RBP7.24□□□□□ -1.25
PEX28YHR150W RPL34BP40525 121 aaKnown RBP7.24□□□□□ -1.25
PEX28YHR150W LSB6P42951 607 aa7.24□□□□□ -1.25
PEX28YHR150W CAK1P43568 368 aaPredicted RBP7.24□□□□□ -1.25
PEX28YHR150W AIM22P47051 409 aa7.24□□□□□ -1.25
PEX28YHR150W COG7P53195 279 aa7.24□□□□□ -1.25
PEX28YHR150W YNL260CP53846 198 aa7.24□□□□□ -1.25
PEX28YHR150W NUP49Q02199 472 aa7.24□□□□□ -1.25
PEX28YHR150W PLP1Q04004 230 aa7.24□□□□□ -1.25
PEX28YHR150W YLR345WQ06137 509 aa7.24□□□□□ -1.25
PEX28YHR150W RKM1Q08961 583 aaPredicted RBP7.24□□□□□ -1.25
PEX28YHR150W SAM4Q08985 325 aaKnown RBP7.24□□□□□ -1.25
PEX28YHR150W RBD2Q12270 262 aa7.24□□□□□ -1.25
PEX28YHR150W HTA1P04911 132 aaKnown RBP7.23□□□□□ -1.25
PEX28YHR150W YAR066WP0CX18 203 aa7.23□□□□□ -1.25
PEX28YHR150W YHR214WP0CX19 203 aa7.23□□□□□ -1.25
PEX28YHR150W RPP1BP10622 106 aaKnown RBP7.23□□□□□ -1.25
PEX28YHR150W REV1P12689 985 aa7.23□□□□□ -1.25
PEX28YHR150W VPS33P20795 691 aa7.23□□□□□ -1.25
PEX28YHR150W HIR2P32480 875 aa7.23□□□□□ -1.25
PEX28YHR150W PRP19P32523 503 aaKnown RBP7.23□□□□□ -1.25
PEX28YHR150W UBA4P38820 440 aa7.23□□□□□ -1.25
PEX28YHR150W TIM17P39515 158 aa7.23□□□□□ -1.25
PEX28YHR150W GDH3P39708 457 aa7.23□□□□□ -1.25
PEX28YHR150W BOL3P39724 118 aa7.23□□□□□ -1.25
PEX28YHR150W LSM5P40089 93 aaKnown RBP7.23□□□□□ -1.25
PEX28YHR150W HOC1P47124 396 aa7.23□□□□□ -1.25
PEX28YHR150W TUB4P53378 473 aa7.23□□□□□ -1.25
PEX28YHR150W HST3P53687 447 aa7.23□□□□□ -1.25
PEX28YHR150W IMP4P53941 290 aaKnown RBP7.23□□□□□ -1.25
PEX28YHR150W NPL3Q01560 414 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
PEX28YHR150W MAK3Q03503 176 aa7.23□□□□□ -1.25
PEX28YHR150W ARX1Q03862 593 aaKnown RBP7.23□□□□□ -1.25
PEX28YHR150W COA4Q05809 96 aa7.23□□□□□ -1.25
PEX28YHR150W COS7Q07788 383 aa7.23□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms