RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	UBP8	P50102	471 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	ROG1	P53118	685 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	GND2	P53319	492 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	LSC1	P53598	329 aa	Known RBP	4.2	□□□□□ -1.74
VMA22	YHR060W	DSL1	P53847	754 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	YNL146W	P53906	100 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	ATC1	Q04005	294 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	HSP31	Q04432	237 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	ECM18	Q04623	453 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	SWF1	Q04629	336 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	PDR8	Q06149	701 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	MCH4	Q08268	501 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	AAD15	Q08361	143 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	YOR365C	Q08844	703 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	MRPL23	Q12487	163 aa	Predicted RBP	4.2	□□□□□ -1.74
VMA22	YHR060W	SNF3	P10870	884 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	RPB8	P20436	146 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	SAG1	P20840	650 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	KIN3	P22209	435 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	SAT4	P25333	603 aa	Known RBP	4.19	□□□□□ -1.74
VMA22	YHR060W	GID7	P25569	745 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	PRP21	P32524	280 aa	Predicted RBP	4.19	□□□□□ -1.74
VMA22	YHR060W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
VMA22	YHR060W	PCA1	P38360	1216 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	PET100	P38958	111 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	YJL043W	P47053	257 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	YGL114W	P53134	725 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	SMM1	P53720	384 aa	Known RBP	4.19	□□□□□ -1.74
VMA22	YHR060W	MPP6	P53725	186 aa	Predicted RBP	4.19	□□□□□ -1.74
VMA22	YHR060W	CUR1	Q06469	252 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	RDR1	Q08904	546 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	NCE102	Q12207	173 aa	RIP-Chip data	4.19	□□□□□ -1.74	not detected
VMA22	YHR060W	APC2	Q12440	853 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	SFG1	Q12507	346 aa		4.19	□□□□□ -1.74
VMA22	YHR060W	RPN13	O13563	156 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	GAL4	P04386	881 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	CDC21	P06785	304 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	GPA1	P08539	472 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	MAS1	P10507	462 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	GAL3	P13045	520 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	NUP1	P20676	1076 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	GSY2	P27472	705 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	PSO2	P30620	661 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	RFC3	P38629	340 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	BZZ1	P38822	633 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	CDC1	P40986	491 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	GCD10	P41814	478 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	QRI1	P43123	477 aa	Known RBP	4.18	□□□□□ -1.74
VMA22	YHR060W	YJR154W	P47181	346 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	VOA1	P53262	265 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	YGR266W	P53326	701 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	PEX27	Q08580	376 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	ULA1	Q12059	462 aa		4.18	□□□□□ -1.74
VMA22	YHR060W	HIS4	P00815	799 aa	Known RBP	4.17	□□□□□ -1.74
VMA22	YHR060W	NFT1	P0CE68	1218 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	FUN19	P28003	413 aa	Predicted RBP	4.17	□□□□□ -1.74
VMA22	YHR060W	SNC1	P31109	117 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	CYS4	P32582	507 aa	Known RBP	4.17	□□□□□ -1.74
VMA22	YHR060W	RAD24	P32641	659 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	MRP4	P32902	394 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	MSN2	P33748	704 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	SOR1	P35497	357 aa	Known RBP	4.17	□□□□□ -1.74
VMA22	YHR060W	CAB3	P36076	571 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	INM1	P38710	295 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	ARN1	P38731	627 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	PHO86	P46956	311 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	LOH1	P47055	219 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	RTT102	P53330	157 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	GIP3	Q03016	1276 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	SPO19	Q03029	223 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	TAF12	Q03761	539 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	GIS1	Q03833	894 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	SEG1	Q04279	960 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	ARP10	Q04549	284 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	APC4	Q04601	652 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	MDM30	Q05930	598 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	PIG1	Q06216	648 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	ARV1	Q06541	321 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	MCP2	Q06567	569 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	SOR2	Q07786	357 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	RRT8	Q08219	342 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	REX4	Q08237	289 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	RDL1	Q12305	139 aa	Known RBP	4.17	□□□□□ -1.74
VMA22	YHR060W	GLE1	Q12315	538 aa		4.17	□□□□□ -1.74
VMA22	YHR060W	SEC3	P33332	1336 aa	Known RBP	4.17	□□□□□ -1.74
VMA22	YHR060W	TDH1	P00360	332 aa	Known RBP	4.16	□□□□□ -1.74
VMA22	YHR060W	SEC63	P14906	663 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	UGA1	P17649	471 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	MAK32	P23060	363 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	RAD57	P25301	460 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	MRPL37	P36532	105 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	QDR3	P38227	689 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	SPP381	P38282	291 aa	Predicted RBP	4.16	□□□□□ -1.74
VMA22	YHR060W	SWC5	P38326	303 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	GPI16	P38875	610 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	SAS2	P40963	338 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	TAX4	P47030	604 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	BNA3	P47039	444 aa	Known RBP	4.16	□□□□□ -1.74
VMA22	YHR060W	RRG8	Q06109	277 aa		4.16	□□□□□ -1.74
VMA22	YHR060W	SSK1	Q07084	712 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms