RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	GOT1	Q03554	138 aa		5.2	□□□□□ -1.58
RSC30	YHR056C	YLR177W	Q06251	628 aa		5.2	□□□□□ -1.58
RSC30	YHR056C	PML1	Q07930	204 aa	Predicted RBP	5.2	□□□□□ -1.58
RSC30	YHR056C	NCE102	Q12207	173 aa	RIP-Chip data	5.2	□□□□□ -1.58	not detected
RSC30	YHR056C	Q0144	Q9ZZW2	109 aa		5.2	□□□□□ -1.58
RSC30	YHR056C	HEM2	P05373	342 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	GCR1	P07261	785 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	MET2	P08465	486 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	YSF3	P0C074	85 aa	Predicted RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	YFR010W-A	P0C5N0	62 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	GCD2	P12754	651 aa	Predicted RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	SRV2	P17555	526 aa	Known RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	RRN3	P36070	627 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	CCT2	P39076	527 aa	Known RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	UTP25	P40498	721 aa	Known RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	YJR141W	P47172	347 aa	Predicted RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	RNH70	P53331	553 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	YLR460C	P54007	376 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	GET4	Q12125	312 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	WSC3	Q12215	556 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	AHA1	Q12449	350 aa	Known RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	RNA1	P11745	407 aa	Known RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	ERD1	P16151	362 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	VPS33	P20795	691 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	PHO87	P25360	923 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	BET3	P36149	193 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	SOK1	P40317	901 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	YFL012W	P43580	148 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	TIS11	P47977	285 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	YGR053C	P53234	283 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	MKC7	P53379	596 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	YMR114C	Q04471	368 aa	Known RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	YTM1	Q12024	460 aa	Predicted RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	ZRT2	Q12436	422 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	YCL012C	Q8J0M4	134 aa		5.19	□□□□□ -1.58
RSC30	YHR056C	NOP14	Q99207	810 aa	Known RBP	5.19	□□□□□ -1.58
RSC30	YHR056C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
RSC30	YHR056C	SLY41	P22215	453 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	MGT1	P26188	188 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	TUL1	P36096	758 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	YKR073C	P36153	106 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	ARL1	P38116	183 aa	Known RBP	5.18	□□□□□ -1.58
RSC30	YHR056C	MGE1	P38523	228 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	MET18	P40469	1032 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	SMA2	Q04658	369 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	YDL211C	Q12121	372 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	RPL15A	P05748	204 aa	Known RBP	5.18	□□□□□ -1.58
RSC30	YHR056C	SPT3	P06844	337 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	SLM5	P25345	492 aa	Known RBP	5.18	□□□□□ -1.58
RSC30	YHR056C	FUN30	P31380	1131 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	IME2	P32581	645 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	FMP52	P40008	231 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	PRE6	P40303	254 aa	Known RBP	5.18	□□□□□ -1.58
RSC30	YHR056C	NDC80	P40460	691 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	GDS1	P41913	522 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	YJR115W	P47152	169 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	BUD32	P53323	261 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	COG6	P53959	839 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	RPL15B	P54780	204 aa	Predicted RBP	5.18	□□□□□ -1.58
RSC30	YHR056C	UTP6	Q02354	440 aa	Known RBP	5.18	□□□□□ -1.58
RSC30	YHR056C	RNH1	Q04740	348 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	YLR352W	Q06479	807 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	RSA1	Q08932	381 aa		5.18	□□□□□ -1.58
RSC30	YHR056C	RAD1	P06777	1100 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	SPO16	P17122	198 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	RPS1A	P33442	255 aa	Known RBP	5.17	□□□□□ -1.58
RSC30	YHR056C	BYE1	P36106	594 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	RKM3	P38222	552 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	SNO3	P43544	222 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	ATP22	P50273	684 aa	Predicted RBP	5.17	□□□□□ -1.58
RSC30	YHR056C	HPT1	Q04178	221 aa	Known RBP	5.17	□□□□□ -1.58
RSC30	YHR056C	DCR2	Q05924	578 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	YPR091C	Q06833	770 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	GCD11	P32481	527 aa	Known RBP	5.17	□□□□□ -1.58
RSC30	YHR056C	MSN2	P33748	704 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	VPS21	P36017	210 aa	Known RBP	5.17	□□□□□ -1.58
RSC30	YHR056C	TPO5	P36029	618 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	RRP14	P36080	434 aa	Known RBP	5.17	□□□□□ -1.58
RSC30	YHR056C	BMT2	P38278	337 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	TRR2	P38816	342 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	MSS4	P38994	779 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	ZRG8	P40021	1076 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	FKH2	P41813	862 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	RQC1	Q05468	723 aa	Known RBP	5.17	□□□□□ -1.58
RSC30	YHR056C	PDR8	Q06149	701 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	YLR040C	Q07988	224 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	YOL019W	Q08157	551 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	RDR1	Q08904	546 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	YKL033W-A	Q86ZR7	236 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	Q0297	Q9ZZV8	51 aa		5.17	□□□□□ -1.58
RSC30	YHR056C	SEC14	P24280	304 aa	Known RBP	5.16	□□□□□ -1.58
RSC30	YHR056C	NPP1	P25353	742 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	TRX3	P25372	127 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	KAR4	P25583	335 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	PTM1	P32857	523 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	VPS51	P36116	164 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	YHL037C	P38733	133 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	SHR5	P41912	237 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	RPE1	P46969	238 aa		5.16	□□□□□ -1.58
RSC30	YHR056C	CWC22	P53333	577 aa	Known RBP	5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms